RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 ZNRF1Q8ND25 227 aa9.45□□□□□ -0.9
HDAC4-210ENST00000493582 OR5A1Q8NGJ0 315 aa9.45□□□□□ -0.9
HDAC4-210ENST00000493582 F11RQ9Y624 299 aaKnown RBP9.45□□□□□ -0.9
HDAC4-210ENST00000493582 TEX50A0A1B0GTY4 177 aa9.45□□□□□ -0.9
HDAC4-210ENST00000493582 SRRM4A7MD48 611 aaKnown RBP9.45□□□□□ -0.9
HDAC4-210ENST00000493582 IGKV1-16P04430 117 aa9.45□□□□□ -0.9
HDAC4-210ENST00000493582 CT45A1Q5HYN5 189 aa9.45□□□□□ -0.9
HDAC4-210ENST00000493582 Q71RC1 249 aaPredicted RBP9.45□□□□□ -0.9
HDAC4-210ENST00000493582 PCP2Q8IVA1 136 aa9.45□□□□□ -0.9
HDAC4-210ENST00000493582 BOD1L2Q8IYS8 172 aa9.45□□□□□ -0.9
HDAC4-210ENST00000493582 CT45A3Q8NHU0 189 aa9.45□□□□□ -0.9
HDAC4-210ENST00000493582 DAZAP1Q96EP5 407 aaKnown RBP9.45□□□□□ -0.9
HDAC4-210ENST00000493582 MLST8Q9BVC4 326 aa9.45□□□□□ -0.9
HDAC4-210ENST00000493582 ZNF257Q9Y2Q1 563 aa9.45□□□□□ -0.9
HDAC4-210ENST00000493582 ABCA1O95477 2261 aa9.45□□□□□ -0.9
HDAC4-210ENST00000493582 CEP192Q8TEP8 1941 aa9.45□□□□□ -0.9
HDAC4-210ENST00000493582 SMIM17P0DL12 118 aa9.45□□□□□ -0.9
HDAC4-210ENST00000493582 PRB4P10163 310 aaPredicted RBP9.45□□□□□ -0.9
HDAC4-210ENST00000493582 FABP2P12104 132 aa9.45□□□□□ -0.9
HDAC4-210ENST00000493582 PRCDQ00LT1 54 aa9.45□□□□□ -0.9
HDAC4-210ENST00000493582 CD69Q07108 199 aa9.45□□□□□ -0.9
HDAC4-210ENST00000493582 LOXL1Q08397 574 aaPredicted RBP9.45□□□□□ -0.9
HDAC4-210ENST00000493582 ADAMTSL5Q6ZMM2 481 aa9.45□□□□□ -0.9
HDAC4-210ENST00000493582 PRSS3P2Q8NHM4 247 aa9.45□□□□□ -0.9
HDAC4-210ENST00000493582 ITLN1Q8WWA0 313 aa9.45□□□□□ -0.9
HDAC4-210ENST00000493582 BOKQ9UMX3 212 aaPredicted RBP9.45□□□□□ -0.9
HDAC4-210ENST00000493582 TSSC4Q9Y5U2 329 aaPredicted RBP9.45□□□□□ -0.9
HDAC4-210ENST00000493582 M0R296 226 aa9.44□□□□□ -0.9
HDAC4-210ENST00000493582 RNASE2P10153 161 aaKnown RBP9.44□□□□□ -0.9
HDAC4-210ENST00000493582 IL11RAQ14626 422 aa9.44□□□□□ -0.9
HDAC4-210ENST00000493582 SAMD5Q5TGI4 173 aa9.44□□□□□ -0.9
HDAC4-210ENST00000493582 ZNF788Q6ZQV5 615 aa9.44□□□□□ -0.9
HDAC4-210ENST00000493582 INSIG2Q9Y5U4 225 aa9.44□□□□□ -0.9
HDAC4-210ENST00000493582 NAV3Q8IVL0 2385 aa9.44□□□□□ -0.9
HDAC4-210ENST00000493582 KIR2DS2P43631 304 aa9.44□□□□□ -0.9
HDAC4-210ENST00000493582 PPP1R32Q7Z5V6 425 aa9.44□□□□□ -0.9
HDAC4-210ENST00000493582 PDPNQ86YL7 162 aa9.44□□□□□ -0.9
HDAC4-210ENST00000493582 SMPXQ9UHP9 88 aa9.44□□□□□ -0.9
HDAC4-210ENST00000493582 IGHV3OR15-7A0A075B7D8 119 aa9.43□□□□□ -0.9
HDAC4-210ENST00000493582 A0A1B0GV72 72 aa9.43□□□□□ -0.9
HDAC4-210ENST00000493582 C19orf71A6NCJ1 209 aa9.43□□□□□ -0.9
HDAC4-210ENST00000493582 MYCNOSP40205 109 aa9.43□□□□□ -0.9
HDAC4-210ENST00000493582 NMUP48645 174 aa9.43□□□□□ -0.9
HDAC4-210ENST00000493582 LINC00305Q7Z4B0 112 aa9.43□□□□□ -0.9
HDAC4-210ENST00000493582 ABHD17AQ96GS6 310 aa9.43□□□□□ -0.9
HDAC4-210ENST00000493582 ATP6V0BQ99437 205 aa9.43□□□□□ -0.9
HDAC4-210ENST00000493582 PRNDQ9UKY0 176 aa9.43□□□□□ -0.9
HDAC4-210ENST00000493582 TRAV8-1A0A0A6YYK1 113 aa9.43□□□□□ -0.9
HDAC4-210ENST00000493582 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.43□□□□□ -0.9
HDAC4-210ENST00000493582 LOC389332A0A1B0GUA5 103 aa9.43□□□□□ -0.9
HDAC4-210ENST00000493582 SMAD7O15105 426 aaKnown RBP9.43□□□□□ -0.9
HDAC4-210ENST00000493582 FCGR2BP31994 310 aaPredicted RBP9.43□□□□□ -0.9
HDAC4-210ENST00000493582 CSN1S1P47710 185 aa9.43□□□□□ -0.9
HDAC4-210ENST00000493582 C2orf83Q53S99 150 aa9.43□□□□□ -0.9
HDAC4-210ENST00000493582 NPIPB3Q92617 1050 aa9.43□□□□□ -0.9
HDAC4-210ENST00000493582 SOX21Q9Y651 276 aaPredicted RBP9.43□□□□□ -0.9
HDAC4-210ENST00000493582 IGKV1D-17A0A075B6S4 117 aa9.42□□□□□ -0.9
HDAC4-210ENST00000493582 GAGE12HA6NDE8 117 aa9.42□□□□□ -0.9
HDAC4-210ENST00000493582 COL8A1P27658 744 aa9.42□□□□□ -0.9
HDAC4-210ENST00000493582 IFI27P40305 119 aaPredicted RBP9.42□□□□□ -0.9
HDAC4-210ENST00000493582 PSG3Q16557 428 aa9.42□□□□□ -0.9
HDAC4-210ENST00000493582 FA2HQ7L5A8 372 aa9.42□□□□□ -0.9
HDAC4-210ENST00000493582 CIARTQ8N365 385 aaPredicted RBP9.42□□□□□ -0.9
HDAC4-210ENST00000493582 OR2Z1Q8NG97 314 aa9.42□□□□□ -0.9
HDAC4-210ENST00000493582 CXXC4Q9H2H0 198 aa9.42□□□□□ -0.9
HDAC4-210ENST00000493582 ZNRD1Q9P1U0 126 aa9.42□□□□□ -0.9
HDAC4-210ENST00000493582 UPK2O00526 184 aa9.42□□□□□ -0.9
HDAC4-210ENST00000493582 LYZL6O75951 148 aa9.42□□□□□ -0.9
HDAC4-210ENST00000493582 ORM2P19652 201 aa9.42□□□□□ -0.9
HDAC4-210ENST00000493582 RAB9AP51151 201 aa9.42□□□□□ -0.9
HDAC4-210ENST00000493582 CACNG7P62955 275 aa9.42□□□□□ -0.9
HDAC4-210ENST00000493582 ICE1Q9Y2F5 2266 aa9.42□□□□□ -0.9
HDAC4-210ENST00000493582 KLF12Q9Y4X4 402 aa9.42□□□□□ -0.9
HDAC4-210ENST00000493582 A0A096LNJ9 63 aa9.42□□□□□ -0.9
HDAC4-210ENST00000493582 SPAARA0A1B0GVQ0 90 aa9.42□□□□□ -0.9
HDAC4-210ENST00000493582 E7EUB6 86 aa9.42□□□□□ -0.9
HDAC4-210ENST00000493582 ZADH2Q8N4Q0 377 aa9.42□□□□□ -0.9
HDAC4-210ENST00000493582 SMRP1Q8NCR6 262 aa9.42□□□□□ -0.9
HDAC4-210ENST00000493582 C18orf15Q96N68 181 aa9.42□□□□□ -0.9
HDAC4-210ENST00000493582 ASCL2Q99929 193 aa9.42□□□□□ -0.9
HDAC4-210ENST00000493582 SH3BGRL2Q9UJC5 107 aa9.42□□□□□ -0.9
HDAC4-210ENST00000493582 K7EMI3 77 aa9.41□□□□□ -0.9
HDAC4-210ENST00000493582 K7ERJ3 54 aa9.41□□□□□ -0.9
HDAC4-210ENST00000493582 TIMM8AO60220 97 aaPredicted RBP9.41□□□□□ -0.9
HDAC4-210ENST00000493582 FSTL3O95633 263 aa9.41□□□□□ -0.9
HDAC4-210ENST00000493582 ARMS2P0C7Q2 107 aa9.41□□□□□ -0.9
HDAC4-210ENST00000493582 CD300EQ496F6 205 aaPredicted RBP9.41□□□□□ -0.9
HDAC4-210ENST00000493582 CALYQ9NYX4 217 aa9.41□□□□□ -0.9
HDAC4-210ENST00000493582 ZNF318Q5VUA4 2279 aa9.41□□□□□ -0.9
HDAC4-210ENST00000493582 NKX2-8O15522 239 aa9.41□□□□□ -0.9
HDAC4-210ENST00000493582 CEACAM3P40198 252 aa9.41□□□□□ -0.9
HDAC4-210ENST00000493582 DHRS13Q6UX07 377 aa9.41□□□□□ -0.9
HDAC4-210ENST00000493582 FLYWCH2Q96CP2 140 aaKnown RBP9.41□□□□□ -0.9
HDAC4-210ENST00000493582 ZNF714Q96N38 554 aa9.41□□□□□ -0.9
HDAC4-210ENST00000493582 MRPL36Q9P0J6 103 aaKnown RBP9.41□□□□□ -0.9
HDAC4-210ENST00000493582 PLXNB1O43157 2135 aa9.41□□□□□ -0.9
HDAC4-210ENST00000493582 DCHS1Q96JQ0 3298 aa9.41□□□□□ -0.9
HDAC4-210ENST00000493582 HAX1O00165 279 aa9.4□□□□□ -0.9
HDAC4-210ENST00000493582 SCGB1A1P11684 91 aa9.4□□□□□ -0.9
HDAC4-210ENST00000493582 GCSHP23434 173 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms