RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 MARC2Q969Z3 335 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 C2orf50Q96LR7 162 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 SEC22CQ9BRL7 303 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 CHRDL1Q9BU40 450 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 ELOVL1Q9BW60 279 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 ENY2Q9NPA8 101 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 ZC4H2Q9NQZ6 224 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 MRPL36Q9P0J6 103 aaKnown RBP5.09□□□□□ -1.59
VPS52-219ENST00000493379 U3KQK5 164 aa5.09□□□□□ -1.59
VPS52-219ENST00000493379 RPS10-NUDT3A0A1W2PQS6 291 aa5.08□□□□□ -1.6
VPS52-219ENST00000493379 TMEM213A2RRL7 107 aa5.08□□□□□ -1.6
VPS52-219ENST00000493379 C2orf70A6NJV1 201 aa5.08□□□□□ -1.6
VPS52-219ENST00000493379 SEC14L6B5MCN3 397 aa5.08□□□□□ -1.6
VPS52-219ENST00000493379 PPP5D1E7EU14 171 aa5.08□□□□□ -1.6
VPS52-219ENST00000493379 FNDC10F2Z333 226 aa5.08□□□□□ -1.6
VPS52-219ENST00000493379 TSC22D2O75157 780 aa5.08□□□□□ -1.6
VPS52-219ENST00000493379 NXPH3O95157 252 aa5.08□□□□□ -1.6
VPS52-219ENST00000493379 IGKV1-17P01599 117 aa5.08□□□□□ -1.6
VPS52-219ENST00000493379 CBLN1P23435 193 aa5.08□□□□□ -1.6
VPS52-219ENST00000493379 NKX2-1P43699 371 aaPredicted RBP5.08□□□□□ -1.6
VPS52-219ENST00000493379 HOXA1P49639 335 aaPredicted RBP5.08□□□□□ -1.6
VPS52-219ENST00000493379 FAM3BP58499 235 aaPredicted RBP5.08□□□□□ -1.6
VPS52-219ENST00000493379 YPEL3P61236 119 aaPredicted RBP5.08□□□□□ -1.6
VPS52-219ENST00000493379 RPP30P78346 268 aaKnown RBP5.08□□□□□ -1.6
VPS52-219ENST00000493379 RELQ04864 619 aaPredicted RBP5.08□□□□□ -1.6
VPS52-219ENST00000493379 IAH1Q2TAA2 248 aaPredicted RBP5.08□□□□□ -1.6
VPS52-219ENST00000493379 SPINK9Q5DT21 86 aa5.08□□□□□ -1.6
VPS52-219ENST00000493379 ZFAND6Q6FIF0 208 aa5.08□□□□□ -1.6
VPS52-219ENST00000493379 TMEM14EPQ6UXP3 125 aa5.08□□□□□ -1.6
VPS52-219ENST00000493379 TMEM190Q8WZ59 177 aa5.08□□□□□ -1.6
VPS52-219ENST00000493379 NPIPB3Q92617 1050 aa5.08□□□□□ -1.6
VPS52-219ENST00000493379 C8orf49Q96NF6 230 aa5.08□□□□□ -1.6
VPS52-219ENST00000493379 PRR25Q96S07 402 aa5.08□□□□□ -1.6
VPS52-219ENST00000493379 RAB40CQ96S21 281 aa5.08□□□□□ -1.6
VPS52-219ENST00000493379 GPN1Q9HCN4 374 aaPredicted RBP5.08□□□□□ -1.6
VPS52-219ENST00000493379 TECRQ9NZ01 308 aaKnown RBP5.08□□□□□ -1.6
VPS52-219ENST00000493379 MRPL27Q9P0M9 148 aaKnown RBP5.08□□□□□ -1.6
VPS52-219ENST00000493379 PEMTQ9UBM1 199 aa5.08□□□□□ -1.6
VPS52-219ENST00000493379 ALMS1Q8TCU4 4167 aa5.08□□□□□ -1.6
VPS52-219ENST00000493379 DNAH10Q8IVF4 4471 aa5.07□□□□□ -1.6
VPS52-219ENST00000493379 HUWE1Q7Z6Z7 4374 aaKnown RBP5.07□□□□□ -1.6
VPS52-219ENST00000493379 OR2T8A6NH00 312 aa5.07□□□□□ -1.6
VPS52-219ENST00000493379 A8MZ25 164 aa5.07□□□□□ -1.6
VPS52-219ENST00000493379 NUPL2O15504 423 aaKnown RBP5.07□□□□□ -1.6
VPS52-219ENST00000493379 IFNA10P01566 189 aa5.07□□□□□ -1.6
VPS52-219ENST00000493379 IGHV3-23P01764 117 aa5.07□□□□□ -1.6
VPS52-219ENST00000493379 MBPP02686 304 aaPredicted RBP5.07□□□□□ -1.6
VPS52-219ENST00000493379 IGLC1P0CG04 106 aa5.07□□□□□ -1.6
VPS52-219ENST00000493379 FOLR2P14207 255 aa5.07□□□□□ -1.6
VPS52-219ENST00000493379 SPNP16150 400 aa5.07□□□□□ -1.6
VPS52-219ENST00000493379 GPR183P32249 361 aa5.07□□□□□ -1.6
VPS52-219ENST00000493379 POLR2GP62487 172 aaKnown RBP eCLIP5.07□□□□□ -1.6
VPS52-219ENST00000493379 CYCSP99999 105 aaKnown RBP5.07□□□□□ -1.6
VPS52-219ENST00000493379 DCTN2Q13561 401 aaKnown RBP5.07□□□□□ -1.6
VPS52-219ENST00000493379 GAMTQ14353 236 aa5.07□□□□□ -1.6
VPS52-219ENST00000493379 OXA1LQ15070 435 aa5.07□□□□□ -1.6
VPS52-219ENST00000493379 DEFB114Q30KQ6 69 aa5.07□□□□□ -1.6
VPS52-219ENST00000493379 UNQ9165/PRO28630Q6UXU0 137 aa5.07□□□□□ -1.6
VPS52-219ENST00000493379 ZNF600Q6ZNG1 722 aa5.07□□□□□ -1.6
VPS52-219ENST00000493379 OR4C12Q96R67 309 aa5.07□□□□□ -1.6
VPS52-219ENST00000493379 NMES1Q9C002 83 aa5.07□□□□□ -1.6
VPS52-219ENST00000493379 RCL1Q9Y2P8 373 aaKnown RBP5.07□□□□□ -1.6
VPS52-219ENST00000493379 UFC1Q9Y3C8 167 aa5.07□□□□□ -1.6
VPS52-219ENST00000493379 LSM4Q9Y4Z0 139 aaKnown RBP5.07□□□□□ -1.6
VPS52-219ENST00000493379 S4R3C0 116 aa5.07□□□□□ -1.6
VPS52-219ENST00000493379 IGKV1D-37A0A075B6S9 117 aa5.06□□□□□ -1.6
VPS52-219ENST00000493379 TRAV25A0A0B4J276 109 aa5.06□□□□□ -1.6
VPS52-219ENST00000493379 WI2-2373I1.2A0A1W2PRP0 233 aa5.06□□□□□ -1.6
VPS52-219ENST00000493379 K7EPK0 472 aa5.06□□□□□ -1.6
VPS52-219ENST00000493379 GNG7O60262 68 aa5.06□□□□□ -1.6
VPS52-219ENST00000493379 OPRK1P41145 380 aa5.06□□□□□ -1.6
VPS52-219ENST00000493379 H2BFSP57053 126 aa5.06□□□□□ -1.6
VPS52-219ENST00000493379 SUMO2P61956 95 aaKnown RBP5.06□□□□□ -1.6
VPS52-219ENST00000493379 RAB11AP62491 216 aa5.06□□□□□ -1.6
VPS52-219ENST00000493379 GSG1LQ6UXU4 331 aa5.06□□□□□ -1.6
VPS52-219ENST00000493379 TMEM144Q7Z5S9 345 aa5.06□□□□□ -1.6
VPS52-219ENST00000493379 THAP8Q8NA92 274 aa5.06□□□□□ -1.6
VPS52-219ENST00000493379 OR1S2Q8NGQ3 325 aa5.06□□□□□ -1.6
VPS52-219ENST00000493379 C20orf173Q96LM9 149 aa5.06□□□□□ -1.6
VPS52-219ENST00000493379 B9D2Q9BPU9 175 aa5.06□□□□□ -1.6
VPS52-219ENST00000493379 GGACTQ9BVM4 153 aa5.06□□□□□ -1.6
VPS52-219ENST00000493379 VSIRQ9H7M9 311 aa5.06□□□□□ -1.6
VPS52-219ENST00000493379 DAZ1Q9NQZ3 744 aaKnown RBP5.06□□□□□ -1.6
VPS52-219ENST00000493379 SMPXQ9UHP9 88 aa5.06□□□□□ -1.6
VPS52-219ENST00000493379 STRAPQ9Y3F4 350 aaKnown RBP5.06□□□□□ -1.6
VPS52-219ENST00000493379 SORL1Q92673 2214 aa5.06□□□□□ -1.6
VPS52-219ENST00000493379 IGKV1OR2-108A0A075B7D4 117 aa5.05□□□□□ -1.6
VPS52-219ENST00000493379 IGHV3-21A0A0B4J1V1 117 aa5.05□□□□□ -1.6
VPS52-219ENST00000493379 WRBO00258 174 aa5.05□□□□□ -1.6
VPS52-219ENST00000493379 SAP30O75446 220 aa5.05□□□□□ -1.6
VPS52-219ENST00000493379 DEDDO75618 318 aa5.05□□□□□ -1.6
VPS52-219ENST00000493379 TOMM40O96008 361 aa5.05□□□□□ -1.6
VPS52-219ENST00000493379 CD5P06127 495 aa5.05□□□□□ -1.6
VPS52-219ENST00000493379 CRYBB3P26998 211 aa5.05□□□□□ -1.6
VPS52-219ENST00000493379 PLP1P60201 277 aa5.05□□□□□ -1.6
VPS52-219ENST00000493379 DLK1P80370 383 aa5.05□□□□□ -1.6
VPS52-219ENST00000493379 VWC2Q2TAL6 325 aa5.05□□□□□ -1.6
VPS52-219ENST00000493379 Q56UQ5 140 aa5.05□□□□□ -1.6
VPS52-219ENST00000493379 TOMM20LQ6UXN7 152 aa5.05□□□□□ -1.6
VPS52-219ENST00000493379 Q6ZWC4 215 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms