RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 TMEM144Q7Z5S9 345 aa11.05□□□□□ -0.64
PDZRN3-210ENST00000492909 DUX5Q96PT3 197 aa11.05□□□□□ -0.64
PDZRN3-210ENST00000492909 NPFFR1Q9GZQ6 430 aa11.05□□□□□ -0.64
PDZRN3-210ENST00000492909 THYN1Q9P016 225 aa11.05□□□□□ -0.64
PDZRN3-210ENST00000492909 IGLV11-55A0A075B6I3 123 aa11.05□□□□□ -0.64
PDZRN3-210ENST00000492909 MT-CO2P00403 227 aa11.05□□□□□ -0.64
PDZRN3-210ENST00000492909 ZNF343Q6P1L6 599 aa11.05□□□□□ -0.64
PDZRN3-210ENST00000492909 ZNF709Q8N972 641 aa11.05□□□□□ -0.64
PDZRN3-210ENST00000492909 FANCD2OSQ96PS1 177 aa11.05□□□□□ -0.64
PDZRN3-210ENST00000492909 NPCDR1Q9BY65 106 aa11.05□□□□□ -0.64
PDZRN3-210ENST00000492909 SLC39A9Q9NUM3 307 aa11.05□□□□□ -0.64
PDZRN3-210ENST00000492909 LSM4Q9Y4Z0 139 aaKnown RBP11.05□□□□□ -0.64
PDZRN3-210ENST00000492909 CUBNO60494 3623 aa11.04□□□□□ -0.64
PDZRN3-210ENST00000492909 DNAJC9-AS1A6NH13 148 aa11.04□□□□□ -0.64
PDZRN3-210ENST00000492909 C17orf112F2Z3M2 114 aa11.04□□□□□ -0.64
PDZRN3-210ENST00000492909 I3L2K1 104 aa11.04□□□□□ -0.64
PDZRN3-210ENST00000492909 CRLF1O75462 422 aa11.04□□□□□ -0.64
PDZRN3-210ENST00000492909 IGHV3-48P01763 117 aa11.04□□□□□ -0.64
PDZRN3-210ENST00000492909 MBP02144 154 aa11.04□□□□□ -0.64
PDZRN3-210ENST00000492909 HIST1H1BP16401 226 aaKnown RBP11.04□□□□□ -0.64
PDZRN3-210ENST00000492909 C19orf54Q5BKX5 351 aa11.04□□□□□ -0.64
PDZRN3-210ENST00000492909 ACSM6Q6P461 480 aa11.04□□□□□ -0.64
PDZRN3-210ENST00000492909 OR2T6Q8NHC8 308 aa11.04□□□□□ -0.64
PDZRN3-210ENST00000492909 ACY3Q96HD9 319 aa11.04□□□□□ -0.64
PDZRN3-210ENST00000492909 PRSS22Q9GZN4 317 aa11.04□□□□□ -0.64
PDZRN3-210ENST00000492909 SDF2L1Q9HCN8 221 aa11.04□□□□□ -0.64
PDZRN3-210ENST00000492909 TMEM242Q9NWH2 141 aa11.04□□□□□ -0.64
PDZRN3-210ENST00000492909 LINC00527Q9UJ94 153 aa11.04□□□□□ -0.64
PDZRN3-210ENST00000492909 CTXND1A0A1B0GTU2 59 aa11.03□□□□□ -0.64
PDZRN3-210ENST00000492909 NDUFS6O75380 124 aaKnown RBP11.03□□□□□ -0.64
PDZRN3-210ENST00000492909 RND2P52198 227 aa11.03□□□□□ -0.64
PDZRN3-210ENST00000492909 CTAG1AP78358 180 aa11.03□□□□□ -0.64
PDZRN3-210ENST00000492909 RAB31Q13636 194 aa11.03□□□□□ -0.64
PDZRN3-210ENST00000492909 KIAA0141Q14154 515 aaPredicted RBP11.03□□□□□ -0.64
PDZRN3-210ENST00000492909 ZNF674Q2M3X9 581 aa11.03□□□□□ -0.64
PDZRN3-210ENST00000492909 RPP25LQ8N5L8 163 aaKnown RBP11.03□□□□□ -0.64
PDZRN3-210ENST00000492909 ZNF355PQ9NSJ1 428 aa11.03□□□□□ -0.64
PDZRN3-210ENST00000492909 ZNF580Q9UK33 172 aa11.03□□□□□ -0.64
PDZRN3-210ENST00000492909 TGIF2-C20orf24A0A0A6YYL0 155 aa11.03□□□□□ -0.64
PDZRN3-210ENST00000492909 IGHV3-21A0A0B4J1V1 117 aa11.03□□□□□ -0.64
PDZRN3-210ENST00000492909 K7EIM0 57 aa11.03□□□□□ -0.64
PDZRN3-210ENST00000492909 KLK9Q2XQG4 91 aa11.03□□□□□ -0.64
PDZRN3-210ENST00000492909 TMEM116Q8NCL8 245 aa11.03□□□□□ -0.64
PDZRN3-210ENST00000492909 ZNF418Q8TF45 676 aaPredicted RBP11.03□□□□□ -0.64
PDZRN3-210ENST00000492909 NPIPB3Q92617 1050 aa11.03□□□□□ -0.64
PDZRN3-210ENST00000492909 NOL4LQ96MY1 436 aaPredicted RBP11.03□□□□□ -0.64
PDZRN3-210ENST00000492909 MGST2Q99735 147 aa11.03□□□□□ -0.64
PDZRN3-210ENST00000492909 KLK9Q9UKQ9 250 aa11.03□□□□□ -0.64
PDZRN3-210ENST00000492909 IGKV1OR2-108A0A075B7D4 117 aa11.02□□□□□ -0.65
PDZRN3-210ENST00000492909 SOX15O60248 233 aa11.02□□□□□ -0.65
PDZRN3-210ENST00000492909 CLN5O75503 358 aa11.02□□□□□ -0.65
PDZRN3-210ENST00000492909 OR2J3O76001 311 aa11.02□□□□□ -0.65
PDZRN3-210ENST00000492909 HOXA5P20719 270 aa11.02□□□□□ -0.65
PDZRN3-210ENST00000492909 GGTLC1Q9BX51 225 aa11.02□□□□□ -0.65
PDZRN3-210ENST00000492909 MRPL36Q9P0J6 103 aaKnown RBP11.02□□□□□ -0.65
PDZRN3-210ENST00000492909 SETD2Q9BYW2 2564 aaPredicted RBP11.02□□□□□ -0.65
PDZRN3-210ENST00000492909 NF1P21359 2839 aa11.01□□□□□ -0.65
PDZRN3-210ENST00000492909 TRBV9A0A0B4J1U6 114 aa11.01□□□□□ -0.65
PDZRN3-210ENST00000492909 CLDN34H7C241 214 aa11.01□□□□□ -0.65
PDZRN3-210ENST00000492909 CD81P60033 236 aa11.01□□□□□ -0.65
PDZRN3-210ENST00000492909 B2MP61769 119 aa11.01□□□□□ -0.65
PDZRN3-210ENST00000492909 OR10G9Q8NGN4 311 aa11.01□□□□□ -0.65
PDZRN3-210ENST00000492909 OR10G7Q8NGN6 311 aa11.01□□□□□ -0.65
PDZRN3-210ENST00000492909 ACTR3CQ9C0K3 210 aaPredicted RBP11.01□□□□□ -0.65
PDZRN3-210ENST00000492909 CTDSP1Q9GZU7 261 aa11.01□□□□□ -0.65
PDZRN3-210ENST00000492909 TMPRSS5Q9H3S3 457 aa11.01□□□□□ -0.65
PDZRN3-210ENST00000492909 ESM1Q9NQ30 184 aa11.01□□□□□ -0.65
PDZRN3-210ENST00000492909 KCNIP2Q9NS61 270 aa11.01□□□□□ -0.65
PDZRN3-210ENST00000492909 FBXL7Q9UJT9 491 aa11.01□□□□□ -0.65
PDZRN3-210ENST00000492909 URGCP-MRPS24S4R325 110 aa11.01□□□□□ -0.65
PDZRN3-210ENST00000492909 TGOLN2O43493 480 aa11□□□□□ -0.65
PDZRN3-210ENST00000492909 NDUFB8O95169 186 aa11□□□□□ -0.65
PDZRN3-210ENST00000492909 PPIFP30405 207 aaKnown RBP11□□□□□ -0.65
PDZRN3-210ENST00000492909 RHOGP84095 191 aa11□□□□□ -0.65
PDZRN3-210ENST00000492909 TMEM95Q3KNT9 176 aa11□□□□□ -0.65
PDZRN3-210ENST00000492909 FFAR4Q5NUL3 377 aa11□□□□□ -0.65
PDZRN3-210ENST00000492909 THAP8Q8NA92 274 aa11□□□□□ -0.65
PDZRN3-210ENST00000492909 OR4X1Q8NH49 305 aa11□□□□□ -0.65
PDZRN3-210ENST00000492909 SLC25A22Q9H936 323 aa11□□□□□ -0.65
PDZRN3-210ENST00000492909 ZNF702PQ9H963 129 aa11□□□□□ -0.65
PDZRN3-210ENST00000492909 MANBALQ9NQG1 85 aa11□□□□□ -0.65
PDZRN3-210ENST00000492909 NAT8Q9UHE5 227 aa11□□□□□ -0.65
PDZRN3-210ENST00000492909 FAM181BA6NEQ2 426 aa11□□□□□ -0.65
PDZRN3-210ENST00000492909 H3BUA1 57 aa11□□□□□ -0.65
PDZRN3-210ENST00000492909 OR10J1P30954 320 aa11□□□□□ -0.65
PDZRN3-210ENST00000492909 PSMB3P49720 205 aa11□□□□□ -0.65
PDZRN3-210ENST00000492909 MEF2BQ02080 365 aaPredicted RBP11□□□□□ -0.65
PDZRN3-210ENST00000492909 NECAP1Q8NC96 275 aa11□□□□□ -0.65
PDZRN3-210ENST00000492909 TMEM250H0YL14 139 aa10.99□□□□□ -0.65
PDZRN3-210ENST00000492909 BRI3O95415 125 aa10.99□□□□□ -0.65
PDZRN3-210ENST00000492909 CDX1P47902 265 aaPredicted RBP10.99□□□□□ -0.65
PDZRN3-210ENST00000492909 RPL29P47914 159 aaKnown RBP10.99□□□□□ -0.65
PDZRN3-210ENST00000492909 NDUFA6P56556 154 aa10.99□□□□□ -0.65
PDZRN3-210ENST00000492909 HILS1P60008 231 aa10.99□□□□□ -0.65
PDZRN3-210ENST00000492909 C15orf32Q32M92 178 aa10.99□□□□□ -0.65
PDZRN3-210ENST00000492909 MIC13Q5XKP0 118 aa10.99□□□□□ -0.65
PDZRN3-210ENST00000492909 CYP2G1PQ6ZSU1 146 aa10.99□□□□□ -0.65
PDZRN3-210ENST00000492909 Q8N2B8 174 aa10.99□□□□□ -0.65
PDZRN3-210ENST00000492909 VN1R17PQ8TDU5 208 aa10.99□□□□□ -0.65
PDZRN3-210ENST00000492909 FAM210BQ96KR6 192 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms