RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 SNRPGP15A8MWD9 76 aa9.06□□□□□ -0.96
COL6A1-205ENST00000492851 PSG1P11464 419 aa9.06□□□□□ -0.96
COL6A1-205ENST00000492851 TNFSF8P32971 234 aa9.06□□□□□ -0.96
COL6A1-205ENST00000492851 RAB11AP62491 216 aa9.06□□□□□ -0.96
COL6A1-205ENST00000492851 RPP30P78346 268 aaKnown RBP9.06□□□□□ -0.96
COL6A1-205ENST00000492851 USF2Q15853 346 aaPredicted RBP9.06□□□□□ -0.96
COL6A1-205ENST00000492851 TMEM128Q5BJH2 165 aa9.06□□□□□ -0.96
COL6A1-205ENST00000492851 C1orf194Q5T5A4 169 aa9.06□□□□□ -0.96
COL6A1-205ENST00000492851 SAMD13Q5VXD3 122 aa9.06□□□□□ -0.96
COL6A1-205ENST00000492851 LYZL2Q7Z4W2 148 aa9.06□□□□□ -0.96
COL6A1-205ENST00000492851 Q8NAQ8 132 aa9.06□□□□□ -0.96
COL6A1-205ENST00000492851 OR1S1Q8NH92 325 aa9.06□□□□□ -0.96
COL6A1-205ENST00000492851 MCFD2Q8NI22 146 aa9.06□□□□□ -0.96
COL6A1-205ENST00000492851 TMEM170AQ8WVE7 144 aa9.06□□□□□ -0.96
COL6A1-205ENST00000492851 SLC35E1Q96K37 410 aa9.06□□□□□ -0.96
COL6A1-205ENST00000492851 SLC25A21Q9BQT8 299 aaPredicted RBP9.06□□□□□ -0.96
COL6A1-205ENST00000492851 SLIRPQ9GZT3 109 aaKnown RBP9.06□□□□□ -0.96
COL6A1-205ENST00000492851 RBKSQ9H477 322 aa9.06□□□□□ -0.96
COL6A1-205ENST00000492851 IGHV4-28A0A0C4DH34 117 aa9.05□□□□□ -0.96
COL6A1-205ENST00000492851 ZFP92A6NM28 416 aa9.05□□□□□ -0.96
COL6A1-205ENST00000492851 KNCNA6PVL3 124 aa9.05□□□□□ -0.96
COL6A1-205ENST00000492851 FAM90A26D6RGX4 464 aa9.05□□□□□ -0.96
COL6A1-205ENST00000492851 DEFB4AO15263 64 aa9.05□□□□□ -0.96
COL6A1-205ENST00000492851 MED6O75586 246 aa9.05□□□□□ -0.96
COL6A1-205ENST00000492851 CFDP00746 253 aaPredicted RBP9.05□□□□□ -0.96
COL6A1-205ENST00000492851 GIG44P09565 113 aaPredicted RBP9.05□□□□□ -0.96
COL6A1-205ENST00000492851 SLC25A6P12236 298 aa9.05□□□□□ -0.96
COL6A1-205ENST00000492851 S100A7P31151 101 aa9.05□□□□□ -0.96
COL6A1-205ENST00000492851 ID1P41134 155 aa9.05□□□□□ -0.96
COL6A1-205ENST00000492851 SUPT4H1P63272 117 aaKnown RBP9.05□□□□□ -0.96
COL6A1-205ENST00000492851 TOMM5Q8N4H5 51 aa9.05□□□□□ -0.96
COL6A1-205ENST00000492851 RNF125Q96EQ8 232 aa9.05□□□□□ -0.96
COL6A1-205ENST00000492851 TRAV10A0A0B4J240 114 aa9.04□□□□□ -0.96
COL6A1-205ENST00000492851 IGLL5B9A064 214 aa9.04□□□□□ -0.96
COL6A1-205ENST00000492851 NXPH3O95157 252 aa9.04□□□□□ -0.96
COL6A1-205ENST00000492851 RBMY1A1P0DJD3 496 aaKnown RBP9.04□□□□□ -0.96
COL6A1-205ENST00000492851 RBMY1CP0DJD4 496 aa9.04□□□□□ -0.96
COL6A1-205ENST00000492851 S100A5P33763 92 aa9.04□□□□□ -0.96
COL6A1-205ENST00000492851 NKX2-1P43699 371 aaPredicted RBP9.04□□□□□ -0.96
COL6A1-205ENST00000492851 RBMY1FQ15415 496 aaKnown RBP9.04□□□□□ -0.96
COL6A1-205ENST00000492851 SPATA31B1PQ5VZV4 182 aa9.04□□□□□ -0.96
COL6A1-205ENST00000492851 LRTM2Q8N967 370 aa9.04□□□□□ -0.96
COL6A1-205ENST00000492851 CSNK1G2-AS1Q8NCQ2 148 aa9.04□□□□□ -0.96
COL6A1-205ENST00000492851 CIB3Q96Q77 187 aaPredicted RBP9.04□□□□□ -0.96
COL6A1-205ENST00000492851 TMED3Q9Y3Q3 217 aa9.04□□□□□ -0.96
COL6A1-205ENST00000492851 H3BMM0 161 aa9.03□□□□□ -0.96
COL6A1-205ENST00000492851 H3BMQ9 156 aa9.03□□□□□ -0.96
COL6A1-205ENST00000492851 C4BPBP20851 252 aa9.03□□□□□ -0.96
COL6A1-205ENST00000492851 HLA-DMBP28068 263 aa9.03□□□□□ -0.96
COL6A1-205ENST00000492851 GAMTQ14353 236 aa9.03□□□□□ -0.96
COL6A1-205ENST00000492851 PYDC2Q56P42 97 aa9.03□□□□□ -0.96
COL6A1-205ENST00000492851 GGNBP1Q5YKI7 109 aa9.03□□□□□ -0.96
COL6A1-205ENST00000492851 TMED4Q7Z7H5 227 aa9.03□□□□□ -0.96
COL6A1-205ENST00000492851 RPP25LQ8N5L8 163 aaKnown RBP9.03□□□□□ -0.96
COL6A1-205ENST00000492851 PBDC1Q9BVG4 233 aa9.03□□□□□ -0.96
COL6A1-205ENST00000492851 X6R8D5 127 aa9.03□□□□□ -0.96
COL6A1-205ENST00000492851 TMEM189A5PLL7 270 aa9.02□□□□□ -0.97
COL6A1-205ENST00000492851 SMIM9A6NGZ8 99 aa9.02□□□□□ -0.97
COL6A1-205ENST00000492851 PITX3O75364 302 aa9.02□□□□□ -0.97
COL6A1-205ENST00000492851 HLA-DRB4P13762 266 aa9.02□□□□□ -0.97
COL6A1-205ENST00000492851 PSMB3P49720 205 aa9.02□□□□□ -0.97
COL6A1-205ENST00000492851 CLUHP3Q96NS8 147 aa9.02□□□□□ -0.97
COL6A1-205ENST00000492851 TRGV9Q99603 122 aa9.02□□□□□ -0.97
COL6A1-205ENST00000492851 PRR13Q9NZ81 148 aa9.02□□□□□ -0.97
COL6A1-205ENST00000492851 APLNQ9ULZ1 77 aa9.02□□□□□ -0.97
COL6A1-205ENST00000492851 HLA-DRB4X5D2U9 266 aa9.02□□□□□ -0.97
COL6A1-205ENST00000492851 VAMP1P23763 118 aa9.01□□□□□ -0.97
COL6A1-205ENST00000492851 MEOX2P50222 304 aa9.01□□□□□ -0.97
COL6A1-205ENST00000492851 OR8I2Q8N0Y5 310 aa9.01□□□□□ -0.97
COL6A1-205ENST00000492851 COQ8AQ8NI60 647 aa9.01□□□□□ -0.97
COL6A1-205ENST00000492851 PPP1R14BQ96C90 147 aa9.01□□□□□ -0.97
COL6A1-205ENST00000492851 NEU1Q99519 415 aa9.01□□□□□ -0.97
COL6A1-205ENST00000492851 RNF126Q9BV68 326 aa9.01□□□□□ -0.97
COL6A1-205ENST00000492851 CLEC5AQ9NY25 188 aa9.01□□□□□ -0.97
COL6A1-205ENST00000492851 SLC45A2Q9UMX9 530 aa9.01□□□□□ -0.97
COL6A1-205ENST00000492851 BIRC6Q9NR09 4857 aa9.01□□□□□ -0.97
COL6A1-205ENST00000492851 ISLRO14498 428 aa9□□□□□ -0.97
COL6A1-205ENST00000492851 DEDDO75618 318 aa9□□□□□ -0.97
COL6A1-205ENST00000492851 UBE2MP61081 183 aaKnown RBP9□□□□□ -0.97
COL6A1-205ENST00000492851 ZNF90Q03938 601 aa9□□□□□ -0.97
COL6A1-205ENST00000492851 EBLN2Q6P2I7 272 aa9□□□□□ -0.97
COL6A1-205ENST00000492851 FOXI2Q6ZQN5 318 aa9□□□□□ -0.97
COL6A1-205ENST00000492851 Q6ZTC4 211 aa9□□□□□ -0.97
COL6A1-205ENST00000492851 LINC00052Q96N35 136 aa9□□□□□ -0.97
COL6A1-205ENST00000492851 SAV1Q9H4B6 383 aaPredicted RBP9□□□□□ -0.97
COL6A1-205ENST00000492851 XCL2Q9UBD3 114 aa9□□□□□ -0.97
COL6A1-205ENST00000492851 IGKV1D-37A0A075B6S9 117 aa8.99□□□□□ -0.97
COL6A1-205ENST00000492851 ELOA3CA0A087WX78 387 aaPredicted RBP8.99□□□□□ -0.97
COL6A1-205ENST00000492851 TEX48A0A1B0GUV7 120 aa8.99□□□□□ -0.97
COL6A1-205ENST00000492851 SYNGR2O43760 224 aa8.99□□□□□ -0.97
COL6A1-205ENST00000492851 SFT2D2O95562 160 aa8.99□□□□□ -0.97
COL6A1-205ENST00000492851 SPART-AS1P0CW21 52 aa8.99□□□□□ -0.97
COL6A1-205ENST00000492851 GALR1P47211 349 aa8.99□□□□□ -0.97
COL6A1-205ENST00000492851 LYZP61626 148 aa8.99□□□□□ -0.97
COL6A1-205ENST00000492851 THAP8Q8NA92 274 aa8.99□□□□□ -0.97
COL6A1-205ENST00000492851 OR4D5Q8NGN0 318 aa8.99□□□□□ -0.97
COL6A1-205ENST00000492851 TRIM63Q969Q1 353 aa8.99□□□□□ -0.97
COL6A1-205ENST00000492851 PAIP2BQ9ULR5 123 aaKnown RBP8.99□□□□□ -0.97
COL6A1-205ENST00000492851 IGHV4-4A0A075B6R2 117 aa8.98□□□□□ -0.97
COL6A1-205ENST00000492851 DEFB131BA0A096LNP1 70 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms