RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 RAB40CQ96S21 281 aa12.54□□□□□ -0.4
SGMS1-204ENST00000492601 DNAH6Q9C0G6 4158 aa12.53□□□□□ -0.4
SGMS1-204ENST00000492601 IGHV4-28A0A0C4DH34 117 aa12.53□□□□□ -0.4
SGMS1-204ENST00000492601 FAM90A26D6RGX4 464 aa12.53□□□□□ -0.4
SGMS1-204ENST00000492601 BUB3O43684 328 aa12.53□□□□□ -0.4
SGMS1-204ENST00000492601 RBMY1A1P0DJD3 496 aaKnown RBP12.53□□□□□ -0.4
SGMS1-204ENST00000492601 RBMY1CP0DJD4 496 aa12.53□□□□□ -0.4
SGMS1-204ENST00000492601 RBMY1FQ15415 496 aaKnown RBP12.53□□□□□ -0.4
SGMS1-204ENST00000492601 TMEM41BQ5BJD5 291 aa12.53□□□□□ -0.4
SGMS1-204ENST00000492601 SIGLEC15Q6ZMC9 328 aa12.53□□□□□ -0.4
SGMS1-204ENST00000492601 PBDC1Q9BVG4 233 aa12.53□□□□□ -0.4
SGMS1-204ENST00000492601 NRN1Q9NPD7 142 aa12.53□□□□□ -0.4
SGMS1-204ENST00000492601 FAUP35544 74 aaKnown RBP12.52□□□□□ -0.41
SGMS1-204ENST00000492601 SNRPD3P62318 126 aaKnown RBP12.52□□□□□ -0.41
SGMS1-204ENST00000492601 GAMTQ14353 236 aa12.52□□□□□ -0.41
SGMS1-204ENST00000492601 LGALS9CQ6DKI2 356 aa12.52□□□□□ -0.41
SGMS1-204ENST00000492601 TOMM5Q8N4H5 51 aa12.52□□□□□ -0.41
SGMS1-204ENST00000492601 C2CD4CQ8TF44 421 aa12.52□□□□□ -0.41
SGMS1-204ENST00000492601 TRIM63Q969Q1 353 aa12.52□□□□□ -0.41
SGMS1-204ENST00000492601 RNF125Q96EQ8 232 aa12.52□□□□□ -0.41
SGMS1-204ENST00000492601 ZFP92A6NM28 416 aa12.51□□□□□ -0.41
SGMS1-204ENST00000492601 IAPPP10997 89 aa12.51□□□□□ -0.41
SGMS1-204ENST00000492601 MIFP14174 115 aa12.51□□□□□ -0.41
SGMS1-204ENST00000492601 ZNF90Q03938 601 aa12.51□□□□□ -0.41
SGMS1-204ENST00000492601 SLC35E1Q96K37 410 aa12.51□□□□□ -0.41
SGMS1-204ENST00000492601 V9GYH0 126 aa12.51□□□□□ -0.41
SGMS1-204ENST00000492601 X6R8D5 127 aa12.51□□□□□ -0.41
SGMS1-204ENST00000492601 IGKV1D-37A0A075B6S9 117 aa12.5□□□□□ -0.41
SGMS1-204ENST00000492601 CCDC160A6NGH7 325 aa12.5□□□□□ -0.41
SGMS1-204ENST00000492601 ZNF705EA8MWA4 302 aaPredicted RBP12.5□□□□□ -0.41
SGMS1-204ENST00000492601 VAMP1P23763 118 aa12.5□□□□□ -0.41
SGMS1-204ENST00000492601 GPX4P36969 197 aaPredicted RBP12.5□□□□□ -0.41
SGMS1-204ENST00000492601 AP3S2P59780 193 aa12.5□□□□□ -0.41
SGMS1-204ENST00000492601 TMEM128Q5BJH2 165 aa12.5□□□□□ -0.41
SGMS1-204ENST00000492601 CSNK1G2-AS1Q8NCQ2 148 aa12.5□□□□□ -0.41
SGMS1-204ENST00000492601 TBC1D24Q9ULP9 559 aa12.5□□□□□ -0.41
SGMS1-204ENST00000492601 PAIP2BQ9ULR5 123 aaKnown RBP12.5□□□□□ -0.41
SGMS1-204ENST00000492601 ELOA3CA0A087WX78 387 aaPredicted RBP12.49□□□□□ -0.41
SGMS1-204ENST00000492601 DUXBA0A1W2PPF3 345 aa12.49□□□□□ -0.41
SGMS1-204ENST00000492601 IGLL5B9A064 214 aa12.49□□□□□ -0.41
SGMS1-204ENST00000492601 PITX3O75364 302 aa12.49□□□□□ -0.41
SGMS1-204ENST00000492601 HLA-DMBP28068 263 aa12.49□□□□□ -0.41
SGMS1-204ENST00000492601 ATP5IP56385 69 aaPredicted RBP12.49□□□□□ -0.41
SGMS1-204ENST00000492601 LYZP61626 148 aa12.49□□□□□ -0.41
SGMS1-204ENST00000492601 OR2F1Q13607 317 aa12.49□□□□□ -0.41
SGMS1-204ENST00000492601 HRH4Q9H3N8 390 aa12.49□□□□□ -0.41
SGMS1-204ENST00000492601 XCL2Q9UBD3 114 aa12.49□□□□□ -0.41
SGMS1-204ENST00000492601 S100A5P33763 92 aa12.48□□□□□ -0.41
SGMS1-204ENST00000492601 DEFB1P60022 68 aa12.48□□□□□ -0.41
SGMS1-204ENST00000492601 ZNF79Q15937 498 aa12.48□□□□□ -0.41
SGMS1-204ENST00000492601 GSG1LQ6UXU4 331 aa12.48□□□□□ -0.41
SGMS1-204ENST00000492601 SEPSECSQ9HD40 501 aaKnown RBP12.48□□□□□ -0.41
SGMS1-204ENST00000492601 PIGBOS1A0A0B4J2F0 54 aa12.47□□□□□ -0.41
SGMS1-204ENST00000492601 C11orf94C9JXX5 98 aa12.47□□□□□ -0.41
SGMS1-204ENST00000492601 H3BMM0 161 aa12.47□□□□□ -0.41
SGMS1-204ENST00000492601 NUP62P37198 522 aaPredicted RBP12.47□□□□□ -0.41
SGMS1-204ENST00000492601 RAB11AP62491 216 aa12.47□□□□□ -0.41
SGMS1-204ENST00000492601 PPP1R1AQ13522 171 aa12.47□□□□□ -0.41
SGMS1-204ENST00000492601 OR8G2PQ6IF36 304 aa12.47□□□□□ -0.41
SGMS1-204ENST00000492601 Q6ZTC4 211 aa12.47□□□□□ -0.41
SGMS1-204ENST00000492601 LRTM2Q8N967 370 aa12.47□□□□□ -0.41
SGMS1-204ENST00000492601 PPP1R14BQ96C90 147 aa12.47□□□□□ -0.41
SGMS1-204ENST00000492601 LINC00052Q96N35 136 aa12.47□□□□□ -0.41
SGMS1-204ENST00000492601 WDR12Q9GZL7 423 aaKnown RBP12.47□□□□□ -0.41
SGMS1-204ENST00000492601 MAGT1Q9H0U3 335 aa12.47□□□□□ -0.41
SGMS1-204ENST00000492601 PFDN2Q9UHV9 154 aa12.47□□□□□ -0.41
SGMS1-204ENST00000492601 SFT2D2O95562 160 aa12.46□□□□□ -0.41
SGMS1-204ENST00000492601 IGKV3-20P01619 116 aa12.46□□□□□ -0.41
SGMS1-204ENST00000492601 FABP1P07148 127 aa12.46□□□□□ -0.41
SGMS1-204ENST00000492601 HOXB5P09067 269 aa12.46□□□□□ -0.41
SGMS1-204ENST00000492601 HLA-DRB4P13762 266 aa12.46□□□□□ -0.41
SGMS1-204ENST00000492601 NUTF2P61970 127 aaKnown RBP12.46□□□□□ -0.41
SGMS1-204ENST00000492601 PRR20EP86478 221 aa12.46□□□□□ -0.41
SGMS1-204ENST00000492601 PRR20CP86479 221 aa12.46□□□□□ -0.41
SGMS1-204ENST00000492601 PRR20DP86480 221 aa12.46□□□□□ -0.41
SGMS1-204ENST00000492601 PRR20BP86481 221 aa12.46□□□□□ -0.41
SGMS1-204ENST00000492601 PRR20AP86496 221 aa12.46□□□□□ -0.41
SGMS1-204ENST00000492601 GDF5OSQ5U4N7 250 aa12.46□□□□□ -0.41
SGMS1-204ENST00000492601 ZNF767PQ75MW2 155 aa12.46□□□□□ -0.41
SGMS1-204ENST00000492601 SLC25A21Q9BQT8 299 aaPredicted RBP12.46□□□□□ -0.41
SGMS1-204ENST00000492601 C1QTNF4Q9BXJ3 329 aa12.46□□□□□ -0.41
SGMS1-204ENST00000492601 APLNQ9ULZ1 77 aa12.46□□□□□ -0.41
SGMS1-204ENST00000492601 CELA1Q9UNI1 258 aa12.46□□□□□ -0.41
SGMS1-204ENST00000492601 HLA-DRB4X5D2U9 266 aa12.46□□□□□ -0.41
SGMS1-204ENST00000492601 SNRPGP15A8MWD9 76 aa12.45□□□□□ -0.42
SGMS1-204ENST00000492601 WRBO00258 174 aa12.45□□□□□ -0.42
SGMS1-204ENST00000492601 MED6O75586 246 aa12.45□□□□□ -0.42
SGMS1-204ENST00000492601 SLC25A6P12236 298 aa12.45□□□□□ -0.42
SGMS1-204ENST00000492601 NKX2-1P43699 371 aaPredicted RBP12.45□□□□□ -0.42
SGMS1-204ENST00000492601 TCTAP57738 103 aa12.45□□□□□ -0.42
SGMS1-204ENST00000492601 FXYD7P58549 80 aa12.45□□□□□ -0.42
SGMS1-204ENST00000492601 CCDC190Q86UF4 302 aa12.45□□□□□ -0.42
SGMS1-204ENST00000492601 CENPSQ8N2Z9 138 aa12.45□□□□□ -0.42
SGMS1-204ENST00000492601 TRGV9Q99603 122 aa12.45□□□□□ -0.42
SGMS1-204ENST00000492601 TMED3Q9Y3Q3 217 aa12.45□□□□□ -0.42
SGMS1-204ENST00000492601 IGKV1OR2-108A0A075B7D4 117 aa12.44□□□□□ -0.42
SGMS1-204ENST00000492601 TRAV10A0A0B4J240 114 aa12.44□□□□□ -0.42
SGMS1-204ENST00000492601 SYNGR2O43760 224 aa12.44□□□□□ -0.42
SGMS1-204ENST00000492601 ID1P41134 155 aa12.44□□□□□ -0.42
SGMS1-204ENST00000492601 C1orf194Q5T5A4 169 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms