RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 LYG2Q86SG7 212 aa8.65□□□□□ -1.02
MDC1-207ENST00000492462 OR51G1Q8NGK1 321 aa8.65□□□□□ -1.02
MDC1-207ENST00000492462 DCANP1Q8TF63 244 aa8.65□□□□□ -1.02
MDC1-207ENST00000492462 CSTL1Q9H114 145 aa8.65□□□□□ -1.02
MDC1-207ENST00000492462 PAIP2BQ9ULR5 123 aaKnown RBP8.65□□□□□ -1.02
MDC1-207ENST00000492462 KNCNA6PVL3 124 aa8.64□□□□□ -1.03
MDC1-207ENST00000492462 FAM90A26D6RGX4 464 aa8.64□□□□□ -1.03
MDC1-207ENST00000492462 WRBO00258 174 aa8.64□□□□□ -1.03
MDC1-207ENST00000492462 SYNGR2O43760 224 aa8.64□□□□□ -1.03
MDC1-207ENST00000492462 ZNF688P0C7X2 276 aa8.64□□□□□ -1.03
MDC1-207ENST00000492462 GPX4P36969 197 aaPredicted RBP8.64□□□□□ -1.03
MDC1-207ENST00000492462 DHRS2Q13268 280 aa8.64□□□□□ -1.03
MDC1-207ENST00000492462 OR2F1Q13607 317 aa8.64□□□□□ -1.03
MDC1-207ENST00000492462 IL17DQ8TAD2 202 aa8.64□□□□□ -1.03
MDC1-207ENST00000492462 GRAMD2BQ96HH9 432 aa8.64□□□□□ -1.03
MDC1-207ENST00000492462 SLC35E1Q96K37 410 aa8.64□□□□□ -1.03
MDC1-207ENST00000492462 IGKV1OR2-108A0A075B7D4 117 aa8.63□□□□□ -1.03
MDC1-207ENST00000492462 ZFP92A6NM28 416 aa8.63□□□□□ -1.03
MDC1-207ENST00000492462 PRSS46E5RG02 174 aa8.63□□□□□ -1.03
MDC1-207ENST00000492462 H3BP45 60 aa8.63□□□□□ -1.03
MDC1-207ENST00000492462 PLA2G10O15496 165 aa8.63□□□□□ -1.03
MDC1-207ENST00000492462 BUB3O43684 328 aa8.63□□□□□ -1.03
MDC1-207ENST00000492462 OR4E1P0C645 316 aa8.63□□□□□ -1.03
MDC1-207ENST00000492462 ATP5IP56385 69 aaPredicted RBP8.63□□□□□ -1.03
MDC1-207ENST00000492462 UBE2MP61081 183 aaKnown RBP8.63□□□□□ -1.03
MDC1-207ENST00000492462 PMS2P11Q13670 270 aa8.63□□□□□ -1.03
MDC1-207ENST00000492462 RNF125Q96EQ8 232 aa8.63□□□□□ -1.03
MDC1-207ENST00000492462 NARS2Q96I59 477 aaKnown RBP8.63□□□□□ -1.03
MDC1-207ENST00000492462 PBDC1Q9BVG4 233 aa8.63□□□□□ -1.03
MDC1-207ENST00000492462 PIGBOS1A0A0B4J2F0 54 aa8.62□□□□□ -1.03
MDC1-207ENST00000492462 HELTA6NFD8 242 aa8.62□□□□□ -1.03
MDC1-207ENST00000492462 CA1P00915 261 aaPredicted RBP8.62□□□□□ -1.03
MDC1-207ENST00000492462 GIG44P09565 113 aaPredicted RBP8.62□□□□□ -1.03
MDC1-207ENST00000492462 POLR2GP62487 172 aaKnown RBP eCLIP8.62□□□□□ -1.03
MDC1-207ENST00000492462 TRPT1Q86TN4 253 aaKnown RBP8.62□□□□□ -1.03
MDC1-207ENST00000492462 FRAS1Q86XX4 4008 aa8.61□□□□□ -1.03
MDC1-207ENST00000492462 MED6O75586 246 aa8.61□□□□□ -1.03
MDC1-207ENST00000492462 EIF2B2P49770 351 aaKnown RBP8.61□□□□□ -1.03
MDC1-207ENST00000492462 DEFB1P60022 68 aa8.61□□□□□ -1.03
MDC1-207ENST00000492462 LYZP61626 148 aa8.61□□□□□ -1.03
MDC1-207ENST00000492462 RAB11AP62491 216 aa8.61□□□□□ -1.03
MDC1-207ENST00000492462 ID3Q02535 119 aa8.61□□□□□ -1.03
MDC1-207ENST00000492462 C4orf46Q504U0 113 aa8.61□□□□□ -1.03
MDC1-207ENST00000492462 PSMG4Q5JS54 123 aa8.61□□□□□ -1.03
MDC1-207ENST00000492462 ACTL10Q5JWF8 245 aa8.61□□□□□ -1.03
MDC1-207ENST00000492462 SPANXN5Q5MJ07 72 aa8.61□□□□□ -1.03
MDC1-207ENST00000492462 TMEM182Q6ZP80 229 aaPredicted RBP8.61□□□□□ -1.03
MDC1-207ENST00000492462 THAP8Q8NA92 274 aa8.61□□□□□ -1.03
MDC1-207ENST00000492462 OR4D5Q8NGN0 318 aa8.61□□□□□ -1.03
MDC1-207ENST00000492462 OR11H2Q8NH07 326 aa8.61□□□□□ -1.03
MDC1-207ENST00000492462 COQ8AQ8NI60 647 aa8.61□□□□□ -1.03
MDC1-207ENST00000492462 TRGV9Q99603 122 aa8.61□□□□□ -1.03
MDC1-207ENST00000492462 C7orf50Q9BRJ6 194 aaKnown RBP8.61□□□□□ -1.03
MDC1-207ENST00000492462 NDUFA13Q9P0J0 144 aa8.61□□□□□ -1.03
MDC1-207ENST00000492462 CXorf65A6NEN9 183 aa8.6□□□□□ -1.03
MDC1-207ENST00000492462 CENPXA8MT69 81 aa8.6□□□□□ -1.03
MDC1-207ENST00000492462 DEFB4AO15263 64 aa8.6□□□□□ -1.03
MDC1-207ENST00000492462 CCNKO75909 580 aa8.6□□□□□ -1.03
MDC1-207ENST00000492462 C4BPBP20851 252 aa8.6□□□□□ -1.03
MDC1-207ENST00000492462 GATA2P23769 480 aaPredicted RBP8.6□□□□□ -1.03
MDC1-207ENST00000492462 PAX9P55771 341 aa8.6□□□□□ -1.03
MDC1-207ENST00000492462 SIGLEC15Q6ZMC9 328 aa8.6□□□□□ -1.03
MDC1-207ENST00000492462 STHQ8IWL8 128 aa8.6□□□□□ -1.03
MDC1-207ENST00000492462 CIB3Q96Q77 187 aaPredicted RBP8.6□□□□□ -1.03
MDC1-207ENST00000492462 RARRES2Q99969 163 aa8.6□□□□□ -1.03
MDC1-207ENST00000492462 KIAA1109Q2LD37 5005 aa8.59□□□□□ -1.03
MDC1-207ENST00000492462 TRAV6A0A075B6T7 132 aa8.59□□□□□ -1.03
MDC1-207ENST00000492462 PMS2P5A8MQ11 134 aa8.59□□□□□ -1.03
MDC1-207ENST00000492462 SNRPGP15A8MWD9 76 aa8.59□□□□□ -1.03
MDC1-207ENST00000492462 LYRM1O43325 122 aa8.59□□□□□ -1.03
MDC1-207ENST00000492462 SSSCA1O60232 199 aa8.59□□□□□ -1.03
MDC1-207ENST00000492462 NKX2-1P43699 371 aaPredicted RBP8.59□□□□□ -1.03
MDC1-207ENST00000492462 AP2S1P53680 142 aaPredicted RBP8.59□□□□□ -1.03
MDC1-207ENST00000492462 OR8G2PQ6IF36 304 aa8.59□□□□□ -1.03
MDC1-207ENST00000492462 ACOT7LQ6ZUV0 252 aa8.59□□□□□ -1.03
MDC1-207ENST00000492462 GATAD1Q8WUU5 269 aa8.59□□□□□ -1.03
MDC1-207ENST00000492462 RAB40CQ96S21 281 aa8.59□□□□□ -1.03
MDC1-207ENST00000492462 WDR12Q9GZL7 423 aaKnown RBP8.59□□□□□ -1.03
MDC1-207ENST00000492462 C20orf85Q9H1P6 137 aa8.59□□□□□ -1.03
MDC1-207ENST00000492462 NRN1Q9NPD7 142 aa8.59□□□□□ -1.03
MDC1-207ENST00000492462 STRAPQ9Y3F4 350 aaKnown RBP8.59□□□□□ -1.03
MDC1-207ENST00000492462 CCSO14618 274 aa8.58□□□□□ -1.04
MDC1-207ENST00000492462 IFNA21P01568 189 aa8.58□□□□□ -1.04
MDC1-207ENST00000492462 RPP30P78346 268 aaKnown RBP8.58□□□□□ -1.04
MDC1-207ENST00000492462 IAH1Q2TAA2 248 aaPredicted RBP8.58□□□□□ -1.04
MDC1-207ENST00000492462 MITD1Q8WV92 249 aa8.58□□□□□ -1.04
MDC1-207ENST00000492462 CLEC5AQ9NY25 188 aa8.58□□□□□ -1.04
MDC1-207ENST00000492462 PSENENQ9NZ42 101 aa8.58□□□□□ -1.04
MDC1-207ENST00000492462 SCGB1D2O95969 90 aa8.57□□□□□ -1.04
MDC1-207ENST00000492462 TCRBP04435 133 aa8.57□□□□□ -1.04
MDC1-207ENST00000492462 FABP1P07148 127 aa8.57□□□□□ -1.04
MDC1-207ENST00000492462 NANOS2P60321 138 aaKnown RBP8.57□□□□□ -1.04
MDC1-207ENST00000492462 AKR1C1Q04828 323 aa8.57□□□□□ -1.04
MDC1-207ENST00000492462 GDF5OSQ5U4N7 250 aa8.57□□□□□ -1.04
MDC1-207ENST00000492462 ZBTB8BQ8NAP8 495 aaPredicted RBP8.57□□□□□ -1.04
MDC1-207ENST00000492462 SMIM8Q96KF7 97 aa8.57□□□□□ -1.04
MDC1-207ENST00000492462 C17orf77Q96MU5 243 aa8.57□□□□□ -1.04
MDC1-207ENST00000492462 SEC22CQ9BRL7 303 aa8.57□□□□□ -1.04
MDC1-207ENST00000492462 GSKIPQ9P0R6 139 aa8.57□□□□□ -1.04
MDC1-207ENST00000492462 RCL1Q9Y2P8 373 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms