RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 DHRS4L2Q6PKH6 230 aa0.81□□□□□ -2.28
HMGB1P30-201ENST00000492455 PXT1Q8NFP0 134 aa0.81□□□□□ -2.28
HMGB1P30-201ENST00000492455 OR10J5Q8NHC4 309 aa0.81□□□□□ -2.28
HMGB1P30-201ENST00000492455 STAG3L4Q8TBR4 150 aa0.81□□□□□ -2.28
HMGB1P30-201ENST00000492455 SLAMF6Q96DU3 332 aa0.81□□□□□ -2.28
HMGB1P30-201ENST00000492455 CEP19Q96LK0 163 aa0.81□□□□□ -2.28
HMGB1P30-201ENST00000492455 HS3ST2Q9Y278 367 aa0.81□□□□□ -2.28
HMGB1P30-201ENST00000492455 SLC35A3Q9Y2D2 325 aa0.81□□□□□ -2.28
HMGB1P30-201ENST00000492455 CACNA1BQ00975 2339 aa0.81□□□□□ -2.28
HMGB1P30-201ENST00000492455 FMN1Q68DA7 1419 aa0.81□□□□□ -2.28
HMGB1P30-201ENST00000492455 MED1Q15648 1581 aaPredicted RBP0.8□□□□□ -2.28
HMGB1P30-201ENST00000492455 PLXND1Q9Y4D7 1925 aa0.8□□□□□ -2.28
HMGB1P30-201ENST00000492455 TRAV3A0A0B4J244 114 aa0.8□□□□□ -2.28
HMGB1P30-201ENST00000492455 TRAV12-1A0A0B4J245 112 aa0.8□□□□□ -2.28
HMGB1P30-201ENST00000492455 HMGB3O15347 200 aaKnown RBP0.8□□□□□ -2.28
HMGB1P30-201ENST00000492455 SULT1B1O43704 296 aa0.8□□□□□ -2.28
HMGB1P30-201ENST00000492455 SRP14P37108 136 aaKnown RBP0.8□□□□□ -2.28
HMGB1P30-201ENST00000492455 ESRGQ1W209 222 aa0.8□□□□□ -2.28
HMGB1P30-201ENST00000492455 C3orf56Q8N813 242 aa0.8□□□□□ -2.28
HMGB1P30-201ENST00000492455 CDC26Q8NHZ8 85 aa0.8□□□□□ -2.28
HMGB1P30-201ENST00000492455 SFT2D1Q8WV19 159 aa0.8□□□□□ -2.28
HMGB1P30-201ENST00000492455 IMUPQ9GZP8 106 aa0.8□□□□□ -2.28
HMGB1P30-201ENST00000492455 TMEM126AQ9H061 195 aa0.8□□□□□ -2.28
HMGB1P30-201ENST00000492455 BCL2L10Q9HD36 194 aa0.8□□□□□ -2.28
HMGB1P30-201ENST00000492455 SNURFQ9Y675 71 aa0.8□□□□□ -2.28
HMGB1P30-201ENST00000492455 TAX1BP3O14907 124 aa0.79□□□□□ -2.28
HMGB1P30-201ENST00000492455 PROSCO94903 275 aa0.79□□□□□ -2.28
HMGB1P30-201ENST00000492455 IFNA7P01567 189 aa0.79□□□□□ -2.28
HMGB1P30-201ENST00000492455 IL9P15248 144 aa0.79□□□□□ -2.28
HMGB1P30-201ENST00000492455 RAB4BP61018 213 aa0.79□□□□□ -2.28
HMGB1P30-201ENST00000492455 CNBPP62633 177 aaKnown RBP0.79□□□□□ -2.28
HMGB1P30-201ENST00000492455 DYNLT1P63172 113 aa0.79□□□□□ -2.28
HMGB1P30-201ENST00000492455 KRR1Q13601 381 aaKnown RBP0.79□□□□□ -2.28
HMGB1P30-201ENST00000492455 DEFB113Q30KQ7 82 aa0.79□□□□□ -2.28
HMGB1P30-201ENST00000492455 Q8IYB0 196 aa0.79□□□□□ -2.28
HMGB1P30-201ENST00000492455 OR2T10Q8NGZ9 312 aa0.79□□□□□ -2.28
HMGB1P30-201ENST00000492455 OR4C6Q8NH72 309 aa0.79□□□□□ -2.28
HMGB1P30-201ENST00000492455 PRADC1Q9BSG0 188 aa0.79□□□□□ -2.28
HMGB1P30-201ENST00000492455 PYCARDQ9ULZ3 195 aa0.79□□□□□ -2.28
HMGB1P30-201ENST00000492455 TRGV10A0A0A0MS01 117 aa0.78□□□□□ -2.28
HMGB1P30-201ENST00000492455 M0R378 163 aa0.78□□□□□ -2.28
HMGB1P30-201ENST00000492455 HYPMO75409 117 aa0.78□□□□□ -2.28
HMGB1P30-201ENST00000492455 ZNF93P35789 620 aaPredicted RBP0.78□□□□□ -2.28
HMGB1P30-201ENST00000492455 NCALDP61601 193 aa0.78□□□□□ -2.28
HMGB1P30-201ENST00000492455 PLCXD2Q0VAA5 305 aa0.78□□□□□ -2.28
HMGB1P30-201ENST00000492455 C1orf137Q5JT78 98 aa0.78□□□□□ -2.28
HMGB1P30-201ENST00000492455 KRTAP5-10Q6L8G5 202 aa0.78□□□□□ -2.28
HMGB1P30-201ENST00000492455 C22orf39Q6P5X5 142 aa0.78□□□□□ -2.28
HMGB1P30-201ENST00000492455 EXOC3-AS1Q8N2X6 119 aa0.78□□□□□ -2.28
HMGB1P30-201ENST00000492455 SLC30A7Q8NEW0 376 aa0.78□□□□□ -2.28
HMGB1P30-201ENST00000492455 ZNF418Q8TF45 676 aaPredicted RBP0.78□□□□□ -2.28
HMGB1P30-201ENST00000492455 ACER3Q9NUN7 267 aa0.78□□□□□ -2.28
HMGB1P30-201ENST00000492455 PRNDQ9UKY0 176 aa0.78□□□□□ -2.28
HMGB1P30-201ENST00000492455 COL4A5P29400 1685 aa0.78□□□□□ -2.29
HMGB1P30-201ENST00000492455 ANAPC1Q9H1A4 1944 aa0.77□□□□□ -2.29
HMGB1P30-201ENST00000492455 NCOA6Q14686 2063 aaPredicted RBP0.77□□□□□ -2.29
HMGB1P30-201ENST00000492455 LOC110117498A0A087WWA1 95 aa0.77□□□□□ -2.29
HMGB1P30-201ENST00000492455 A0A087WX48 190 aa0.77□□□□□ -2.29
HMGB1P30-201ENST00000492455 TRBV6-8A0A0A6YYG3 113 aa0.77□□□□□ -2.29
HMGB1P30-201ENST00000492455 GADD45GO95257 159 aa0.77□□□□□ -2.29
HMGB1P30-201ENST00000492455 GNG5P63218 68 aa0.77□□□□□ -2.29
HMGB1P30-201ENST00000492455 SOSTDC1Q6X4U4 206 aa0.77□□□□□ -2.29
HMGB1P30-201ENST00000492455 PDZD9Q8IXQ8 264 aa0.77□□□□□ -2.29
HMGB1P30-201ENST00000492455 TEX47Q8TBZ9 253 aa0.77□□□□□ -2.29
HMGB1P30-201ENST00000492455 CANT1Q8WVQ1 401 aa0.77□□□□□ -2.29
HMGB1P30-201ENST00000492455 AP3S1Q92572 193 aa0.77□□□□□ -2.29
HMGB1P30-201ENST00000492455 YPEL2Q96QA6 119 aa0.77□□□□□ -2.29
HMGB1P30-201ENST00000492455 CCDC94Q9BW85 323 aaPredicted RBP0.77□□□□□ -2.29
HMGB1P30-201ENST00000492455 C14orf132Q9NPU4 83 aa0.77□□□□□ -2.29
HMGB1P30-201ENST00000492455 MED29Q9NX70 200 aa0.77□□□□□ -2.29
HMGB1P30-201ENST00000492455 STOML2Q9UJZ1 356 aa0.77□□□□□ -2.29
HMGB1P30-201ENST00000492455 KLK9Q9UKQ9 250 aa0.77□□□□□ -2.29
HMGB1P30-201ENST00000492455 EXPH5Q8NEV8 1989 aa0.76□□□□□ -2.29
HMGB1P30-201ENST00000492455 A8MWV9 139 aa0.76□□□□□ -2.29
HMGB1P30-201ENST00000492455 M0R2N4 97 aa0.76□□□□□ -2.29
HMGB1P30-201ENST00000492455 GEMIN2O14893 280 aaKnown RBP0.76□□□□□ -2.29
HMGB1P30-201ENST00000492455 NDUFB3O43676 98 aa0.76□□□□□ -2.29
HMGB1P30-201ENST00000492455 CST8O60676 142 aa0.76□□□□□ -2.29
HMGB1P30-201ENST00000492455 TIMM17BO60830 172 aa0.76□□□□□ -2.29
HMGB1P30-201ENST00000492455 NDUFC2O95298 119 aa0.76□□□□□ -2.29
HMGB1P30-201ENST00000492455 DHFRP00374 187 aa0.76□□□□□ -2.29
HMGB1P30-201ENST00000492455 IFNA1P01562 189 aa0.76□□□□□ -2.29
HMGB1P30-201ENST00000492455 RPL19P84098 196 aaKnown RBP0.76□□□□□ -2.29
HMGB1P30-201ENST00000492455 BCL2L15Q5TBC7 163 aa0.76□□□□□ -2.29
HMGB1P30-201ENST00000492455 TMED4Q7Z7H5 227 aa0.76□□□□□ -2.29
HMGB1P30-201ENST00000492455 CLECL1Q8IZS7 167 aa0.76□□□□□ -2.29
HMGB1P30-201ENST00000492455 FAM19A2Q8N3H0 131 aa0.76□□□□□ -2.29
HMGB1P30-201ENST00000492455 LINC00301Q8NCQ3 95 aa0.76□□□□□ -2.29
HMGB1P30-201ENST00000492455 TEX37Q96LM6 180 aa0.76□□□□□ -2.29
HMGB1P30-201ENST00000492455 C6orf62Q9GZU0 229 aaPredicted RBP0.76□□□□□ -2.29
HMGB1P30-201ENST00000492455 SH3BGRL3Q9H299 93 aa0.76□□□□□ -2.29
HMGB1P30-201ENST00000492455 DLG5Q8TDM6 1919 aa0.76□□□□□ -2.29
HMGB1P30-201ENST00000492455 ECM29Q5VYK3 1845 aa0.75□□□□□ -2.29
HMGB1P30-201ENST00000492455 ARHGEF28Q8N1W1 1705 aaKnown RBP0.75□□□□□ -2.29
HMGB1P30-201ENST00000492455 RIMBP3CA6NJZ7 1639 aa0.75□□□□□ -2.29
HMGB1P30-201ENST00000492455 RIMBP3BA6NNM3 1639 aa0.75□□□□□ -2.29
HMGB1P30-201ENST00000492455 RIMBP3Q9UFD9 1639 aa0.75□□□□□ -2.29
HMGB1P30-201ENST00000492455 MIA2Q96PC5 1412 aa0.75□□□□□ -2.29
HMGB1P30-201ENST00000492455 EIF3AQ14152 1382 aaKnown RBP0.75□□□□□ -2.29
HMGB1P30-201ENST00000492455 DUXBA0A1W2PPF3 345 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms