RNA–Protein interactions for RNA: ENST00000492142.5

TRO-223, Transcript of trophinin, human

TSL 3

Gene TRO, Length 485 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRO-223	ENST00000492142	LSM4	Q9Y4Z0	139 aa	Known RBP	7.5	□□□□□ -1.21
TRO-223	ENST00000492142	LINC01619	G3V211	115 aa		7.49	□□□□□ -1.21
TRO-223	ENST00000492142	CCL24	O00175	119 aa		7.49	□□□□□ -1.21
TRO-223	ENST00000492142	YIF1A	O95070	293 aa		7.49	□□□□□ -1.21
TRO-223	ENST00000492142	FABP1	P07148	127 aa		7.49	□□□□□ -1.21
TRO-223	ENST00000492142	PSG1	P11464	419 aa		7.49	□□□□□ -1.21
TRO-223	ENST00000492142	C4BPB	P20851	252 aa		7.49	□□□□□ -1.21
TRO-223	ENST00000492142	RIPPLY3	P57055	190 aa		7.49	□□□□□ -1.21
TRO-223	ENST00000492142	YPEL3	P61236	119 aa	Predicted RBP	7.49	□□□□□ -1.21
TRO-223	ENST00000492142	ZNF616	Q08AN1	781 aa		7.49	□□□□□ -1.21
TRO-223	ENST00000492142	RPEL1	Q2QD12	228 aa		7.49	□□□□□ -1.21
TRO-223	ENST00000492142	FAM209B	Q5JX69	171 aa		7.49	□□□□□ -1.21
TRO-223	ENST00000492142	MIC13	Q5XKP0	118 aa		7.49	□□□□□ -1.21
TRO-223	ENST00000492142	BPIFC	Q8NFQ6	507 aa		7.49	□□□□□ -1.21
TRO-223	ENST00000492142		Q8WTZ3	238 aa		7.49	□□□□□ -1.21
TRO-223	ENST00000492142	RAX2	Q96IS3	184 aa		7.49	□□□□□ -1.21
TRO-223	ENST00000492142	MDFI	Q99750	246 aa		7.49	□□□□□ -1.21
TRO-223	ENST00000492142	RSG1	Q9BU20	258 aa		7.49	□□□□□ -1.21
TRO-223	ENST00000492142	GGTLC1	Q9BX51	225 aa		7.49	□□□□□ -1.21
TRO-223	ENST00000492142	NPCDR1	Q9BY65	106 aa		7.49	□□□□□ -1.21
TRO-223	ENST00000492142	SLC45A2	Q9UMX9	530 aa		7.49	□□□□□ -1.21
TRO-223	ENST00000492142	IGHV3OR16-8	A0A075B7F1	116 aa		7.48	□□□□□ -1.21
TRO-223	ENST00000492142	ZNF320	A2RRD8	509 aa		7.48	□□□□□ -1.21
TRO-223	ENST00000492142	C17orf112	F2Z3M2	114 aa		7.48	□□□□□ -1.21
TRO-223	ENST00000492142	MPDU1	O75352	247 aa		7.48	□□□□□ -1.21
TRO-223	ENST00000492142	TOMM40	O96008	361 aa		7.48	□□□□□ -1.21
TRO-223	ENST00000492142	LINC00869	P0C866	280 aa		7.48	□□□□□ -1.21
TRO-223	ENST00000492142	ATP6V0C	P27449	155 aa		7.48	□□□□□ -1.21
TRO-223	ENST00000492142	HOXD3	P31249	432 aa	Predicted RBP	7.48	□□□□□ -1.21
TRO-223	ENST00000492142	SLURP1	P55000	103 aa		7.48	□□□□□ -1.21
TRO-223	ENST00000492142	REL	Q04864	619 aa	Predicted RBP	7.48	□□□□□ -1.21
TRO-223	ENST00000492142	TOMM20L	Q6UXN7	152 aa		7.48	□□□□□ -1.21
TRO-223	ENST00000492142	ZNF600	Q6ZNG1	722 aa		7.48	□□□□□ -1.21
TRO-223	ENST00000492142	ZNF414	Q96IQ9	312 aa		7.48	□□□□□ -1.21
TRO-223	ENST00000492142	GINS3	Q9BRX5	216 aa		7.48	□□□□□ -1.21
TRO-223	ENST00000492142	C20orf24	Q9BUV8	137 aa		7.48	□□□□□ -1.21
TRO-223	ENST00000492142	PARD6G	Q9BYG4	376 aa	Predicted RBP	7.48	□□□□□ -1.21
TRO-223	ENST00000492142	SH3BGRL3	Q9H299	93 aa		7.48	□□□□□ -1.21
TRO-223	ENST00000492142	ARV1	Q9H2C2	271 aa		7.48	□□□□□ -1.21
TRO-223	ENST00000492142	PUS1	Q9Y606	427 aa	Known RBP eCLIP	7.48	□□□□□ -1.21
TRO-223	ENST00000492142	PXMP4	Q9Y6I8	212 aa		7.48	□□□□□ -1.21
TRO-223	ENST00000492142	ZNF207	O43670	478 aa	Known RBP	7.47	□□□□□ -1.21
TRO-223	ENST00000492142	IL4	P05112	153 aa		7.47	□□□□□ -1.21
TRO-223	ENST00000492142	TPT1	P13693	172 aa	Known RBP	7.47	□□□□□ -1.21
TRO-223	ENST00000492142	ORM2	P19652	201 aa		7.47	□□□□□ -1.21
TRO-223	ENST00000492142	ZP3	P21754	424 aa		7.47	□□□□□ -1.21
TRO-223	ENST00000492142	RPL29	P47914	159 aa	Known RBP	7.47	□□□□□ -1.21
TRO-223	ENST00000492142	ELL	P55199	621 aa	Predicted RBP	7.47	□□□□□ -1.21
TRO-223	ENST00000492142	SYNJ2BP	P57105	145 aa		7.47	□□□□□ -1.21
TRO-223	ENST00000492142	LYZ	P61626	148 aa		7.47	□□□□□ -1.21
TRO-223	ENST00000492142	SELENOT	P62341	195 aa		7.47	□□□□□ -1.21
TRO-223	ENST00000492142	EIF5A	P63241	154 aa	Known RBP	7.47	□□□□□ -1.21
TRO-223	ENST00000492142	FAM106A	Q4KMX7	169 aa		7.47	□□□□□ -1.21
TRO-223	ENST00000492142	FFAR4	Q5NUL3	377 aa		7.47	□□□□□ -1.21
TRO-223	ENST00000492142	SHISA2	Q6UWI4	295 aa		7.47	□□□□□ -1.21
TRO-223	ENST00000492142	SLC51B	Q86UW2	128 aa		7.47	□□□□□ -1.21
TRO-223	ENST00000492142	GPHB5	Q86YW7	130 aa		7.47	□□□□□ -1.21
TRO-223	ENST00000492142	STPG3	Q8N7X2	389 aa		7.47	□□□□□ -1.21
TRO-223	ENST00000492142	OR51G1	Q8NGK1	321 aa		7.47	□□□□□ -1.21
TRO-223	ENST00000492142	OR2G3	Q8NGZ4	309 aa		7.47	□□□□□ -1.21
TRO-223	ENST00000492142	GNPNAT1	Q96EK6	184 aa	Predicted RBP	7.47	□□□□□ -1.21
TRO-223	ENST00000492142	RCC1L	Q96I51	464 aa	Known RBP	7.47	□□□□□ -1.21
TRO-223	ENST00000492142	PBDC1	Q9BVG4	233 aa		7.47	□□□□□ -1.21
TRO-223	ENST00000492142	SLC25A32	Q9H2D1	315 aa		7.47	□□□□□ -1.21
TRO-223	ENST00000492142	SLC39A9	Q9NUM3	307 aa		7.47	□□□□□ -1.21
TRO-223	ENST00000492142	DOK5	Q9P104	306 aa		7.47	□□□□□ -1.21
TRO-223	ENST00000492142	WI2-2373I1.2	A0A1W2PRP0	233 aa		7.46	□□□□□ -1.22
TRO-223	ENST00000492142	NDUFA4	O00483	81 aa		7.46	□□□□□ -1.22
TRO-223	ENST00000492142	TSPAN15	O95858	294 aa		7.46	□□□□□ -1.22
TRO-223	ENST00000492142	OR5G3	P0C626	314 aa		7.46	□□□□□ -1.22
TRO-223	ENST00000492142	MYCNOS	P40205	109 aa		7.46	□□□□□ -1.22
TRO-223	ENST00000492142	B2M	P61769	119 aa		7.46	□□□□□ -1.22
TRO-223	ENST00000492142	KLF5	Q13887	457 aa	Predicted RBP	7.46	□□□□□ -1.22
TRO-223	ENST00000492142	UNQ9165/PRO28630	Q6UXU0	137 aa		7.46	□□□□□ -1.22
TRO-223	ENST00000492142		Q6ZRG5	221 aa		7.46	□□□□□ -1.22
TRO-223	ENST00000492142	BAP18	Q8IXM2	172 aa		7.46	□□□□□ -1.22
TRO-223	ENST00000492142	OR1B1	Q8NGR6	318 aa		7.46	□□□□□ -1.22
TRO-223	ENST00000492142	ST8SIA2	Q92186	375 aa		7.46	□□□□□ -1.22
TRO-223	ENST00000492142	DLX4	Q92988	240 aa	Predicted RBP	7.46	□□□□□ -1.22
TRO-223	ENST00000492142	TIMM9	Q9Y5J7	89 aa		7.46	□□□□□ -1.22
TRO-223	ENST00000492142	IGHV3-49	A0A0A0MS15	119 aa		7.45	□□□□□ -1.22
TRO-223	ENST00000492142	HYPM	O75409	117 aa		7.45	□□□□□ -1.22
TRO-223	ENST00000492142	CFD	P00746	253 aa	Predicted RBP	7.45	□□□□□ -1.22
TRO-223	ENST00000492142	PF4	P02776	101 aa		7.45	□□□□□ -1.22
TRO-223	ENST00000492142	SPP1	P10451	314 aa		7.45	□□□□□ -1.22
TRO-223	ENST00000492142	FHL3	Q13643	280 aa		7.45	□□□□□ -1.22
TRO-223	ENST00000492142	USF2	Q15853	346 aa	Predicted RBP	7.45	□□□□□ -1.22
TRO-223	ENST00000492142	TM4SF20	Q53R12	229 aa		7.45	□□□□□ -1.22
TRO-223	ENST00000492142	GCSAML	Q5JQS6	135 aa		7.45	□□□□□ -1.22
TRO-223	ENST00000492142	C1QL4	Q86Z23	238 aa		7.45	□□□□□ -1.22
TRO-223	ENST00000492142	OR4F17	Q8NGA8	305 aa		7.45	□□□□□ -1.22
TRO-223	ENST00000492142	STOML3	Q8TAV4	291 aa		7.45	□□□□□ -1.22
TRO-223	ENST00000492142	TMED6	Q8WW62	240 aa		7.45	□□□□□ -1.22
TRO-223	ENST00000492142	RNF125	Q96EQ8	232 aa		7.45	□□□□□ -1.22
TRO-223	ENST00000492142	OR4F4	Q96R69	305 aa		7.45	□□□□□ -1.22
TRO-223	ENST00000492142	PSMG3	Q9BT73	122 aa	Predicted RBP	7.45	□□□□□ -1.22
TRO-223	ENST00000492142	KCNIP2	Q9NS61	270 aa		7.45	□□□□□ -1.22
TRO-223	ENST00000492142	NOTCH3	Q9UM47	2321 aa		7.45	□□□□□ -1.22
TRO-223	ENST00000492142	IGHV3OR16-13	A0A075B7E8	117 aa		7.44	□□□□□ -1.22
TRO-223	ENST00000492142	IGHV3-74	A0A0B4J1X5	117 aa		7.44	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms