RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 BUB3O43684 328 aa6.38□□□□□ -1.39
NUP50-217ENST00000491860 MED6O75586 246 aa6.38□□□□□ -1.39
NUP50-217ENST00000491860 SLC25A6P12236 298 aa6.38□□□□□ -1.39
NUP50-217ENST00000491860 ID1P41134 155 aa6.38□□□□□ -1.39
NUP50-217ENST00000491860 NANOS2P60321 138 aaKnown RBP6.38□□□□□ -1.39
NUP50-217ENST00000491860 RAB11AP62491 216 aa6.38□□□□□ -1.39
NUP50-217ENST00000491860 KLF9Q13886 244 aaPredicted RBP6.38□□□□□ -1.39
NUP50-217ENST00000491860 MLANAQ16655 118 aa6.38□□□□□ -1.39
NUP50-217ENST00000491860 ACTL10Q5JWF8 245 aa6.38□□□□□ -1.39
NUP50-217ENST00000491860 SPATA31B1PQ5VZV4 182 aa6.38□□□□□ -1.39
NUP50-217ENST00000491860 FAM24BQ8N5W8 94 aa6.38□□□□□ -1.39
NUP50-217ENST00000491860 Q8NAQ8 132 aa6.38□□□□□ -1.39
NUP50-217ENST00000491860 NPIPB3Q92617 1050 aa6.38□□□□□ -1.39
NUP50-217ENST00000491860 ACY3Q96HD9 319 aa6.38□□□□□ -1.39
NUP50-217ENST00000491860 SLC35E1Q96K37 410 aa6.38□□□□□ -1.39
NUP50-217ENST00000491860 CIB3Q96Q77 187 aaPredicted RBP6.38□□□□□ -1.39
NUP50-217ENST00000491860 MCUBQ9NWR8 336 aa6.38□□□□□ -1.39
NUP50-217ENST00000491860 TBC1D24Q9ULP9 559 aa6.38□□□□□ -1.39
NUP50-217ENST00000491860 DNAH10Q8IVF4 4471 aa6.38□□□□□ -1.39
NUP50-217ENST00000491860 AGRNO00468 2067 aa6.37□□□□□ -1.39
NUP50-217ENST00000491860 TRAV10A0A0B4J240 114 aa6.37□□□□□ -1.39
NUP50-217ENST00000491860 TEX48A0A1B0GUV7 120 aa6.37□□□□□ -1.39
NUP50-217ENST00000491860 TMEM189A5PLL7 270 aa6.37□□□□□ -1.39
NUP50-217ENST00000491860 SNRPGP15A8MWD9 76 aa6.37□□□□□ -1.39
NUP50-217ENST00000491860 NKX2-1P43699 371 aaPredicted RBP6.37□□□□□ -1.39
NUP50-217ENST00000491860 TMEM128Q5BJH2 165 aa6.37□□□□□ -1.39
NUP50-217ENST00000491860 PSMG4Q5JS54 123 aa6.37□□□□□ -1.39
NUP50-217ENST00000491860 C1orf194Q5T5A4 169 aa6.37□□□□□ -1.39
NUP50-217ENST00000491860 OR1S1Q8NH92 325 aa6.37□□□□□ -1.39
NUP50-217ENST00000491860 RNF125Q96EQ8 232 aa6.37□□□□□ -1.39
NUP50-217ENST00000491860 RAB40CQ96S21 281 aa6.37□□□□□ -1.39
NUP50-217ENST00000491860 SLC25A21Q9BQT8 299 aaPredicted RBP6.37□□□□□ -1.39
NUP50-217ENST00000491860 IGHV4-28A0A0C4DH34 117 aa6.36□□□□□ -1.39
NUP50-217ENST00000491860 SMIM9A6NGZ8 99 aa6.36□□□□□ -1.39
NUP50-217ENST00000491860 ZFP92A6NM28 416 aa6.36□□□□□ -1.39
NUP50-217ENST00000491860 KNCNA6PVL3 124 aa6.36□□□□□ -1.39
NUP50-217ENST00000491860 PSG1P11464 419 aa6.36□□□□□ -1.39
NUP50-217ENST00000491860 S100A5P33763 92 aa6.36□□□□□ -1.39
NUP50-217ENST00000491860 PSMB3P49720 205 aa6.36□□□□□ -1.39
NUP50-217ENST00000491860 MEOX2P50222 304 aa6.36□□□□□ -1.39
NUP50-217ENST00000491860 SUPT4H1P63272 117 aaKnown RBP6.36□□□□□ -1.39
NUP50-217ENST00000491860 USF2Q15853 346 aaPredicted RBP6.36□□□□□ -1.39
NUP50-217ENST00000491860 S100A7AQ86SG5 101 aa6.36□□□□□ -1.39
NUP50-217ENST00000491860 TOMM5Q8N4H5 51 aa6.36□□□□□ -1.39
NUP50-217ENST00000491860 LRTM2Q8N967 370 aa6.36□□□□□ -1.39
NUP50-217ENST00000491860 MCFD2Q8NI22 146 aa6.36□□□□□ -1.39
NUP50-217ENST00000491860 CLUHP3Q96NS8 147 aa6.36□□□□□ -1.39
NUP50-217ENST00000491860 SLIRPQ9GZT3 109 aaKnown RBP6.36□□□□□ -1.39
NUP50-217ENST00000491860 RBKSQ9H477 322 aa6.36□□□□□ -1.39
NUP50-217ENST00000491860 SLC45A2Q9UMX9 530 aa6.36□□□□□ -1.39
NUP50-217ENST00000491860 TMED3Q9Y3Q3 217 aa6.36□□□□□ -1.39
NUP50-217ENST00000491860 DNAH6Q9C0G6 4158 aa6.36□□□□□ -1.39
NUP50-217ENST00000491860 IGLL5B9A064 214 aa6.35□□□□□ -1.39
NUP50-217ENST00000491860 H3BMM0 161 aa6.35□□□□□ -1.39
NUP50-217ENST00000491860 H3BMQ9 156 aa6.35□□□□□ -1.39
NUP50-217ENST00000491860 GIG44P09565 113 aaPredicted RBP6.35□□□□□ -1.39
NUP50-217ENST00000491860 HLA-DRB4P13762 266 aa6.35□□□□□ -1.39
NUP50-217ENST00000491860 HLA-DMBP28068 263 aa6.35□□□□□ -1.39
NUP50-217ENST00000491860 TNFSF8P32971 234 aa6.35□□□□□ -1.39
NUP50-217ENST00000491860 GAMTQ14353 236 aa6.35□□□□□ -1.39
NUP50-217ENST00000491860 GGNBP1Q5YKI7 109 aa6.35□□□□□ -1.39
NUP50-217ENST00000491860 LYZL2Q7Z4W2 148 aa6.35□□□□□ -1.39
NUP50-217ENST00000491860 CSNK1G2-AS1Q8NCQ2 148 aa6.35□□□□□ -1.39
NUP50-217ENST00000491860 TMEM170AQ8WVE7 144 aa6.35□□□□□ -1.39
NUP50-217ENST00000491860 PPP1R14BQ96C90 147 aa6.35□□□□□ -1.39
NUP50-217ENST00000491860 NEU1Q99519 415 aa6.35□□□□□ -1.39
NUP50-217ENST00000491860 TRGV9Q99603 122 aa6.35□□□□□ -1.39
NUP50-217ENST00000491860 SOSTQ9BQB4 213 aa6.35□□□□□ -1.39
NUP50-217ENST00000491860 RNF126Q9BV68 326 aa6.35□□□□□ -1.39
NUP50-217ENST00000491860 PBDC1Q9BVG4 233 aa6.35□□□□□ -1.39
NUP50-217ENST00000491860 HLA-DRB4X5D2U9 266 aa6.35□□□□□ -1.39
NUP50-217ENST00000491860 X6R8D5 127 aa6.35□□□□□ -1.39
NUP50-217ENST00000491860 ISLRO14498 428 aa6.34□□□□□ -1.39
NUP50-217ENST00000491860 DEFB4AO15263 64 aa6.34□□□□□ -1.39
NUP50-217ENST00000491860 NXPH3O95157 252 aa6.34□□□□□ -1.39
NUP50-217ENST00000491860 RBMY1A1P0DJD3 496 aaKnown RBP6.34□□□□□ -1.39
NUP50-217ENST00000491860 RBMY1CP0DJD4 496 aa6.34□□□□□ -1.39
NUP50-217ENST00000491860 C4BPBP20851 252 aa6.34□□□□□ -1.39
NUP50-217ENST00000491860 UBE2MP61081 183 aaKnown RBP6.34□□□□□ -1.39
NUP50-217ENST00000491860 RBMY1FQ15415 496 aaKnown RBP6.34□□□□□ -1.39
NUP50-217ENST00000491860 PYDC2Q56P42 97 aa6.34□□□□□ -1.39
NUP50-217ENST00000491860 FOXI2Q6ZQN5 318 aa6.34□□□□□ -1.39
NUP50-217ENST00000491860 TMED4Q7Z7H5 227 aa6.34□□□□□ -1.39
NUP50-217ENST00000491860 COQ8AQ8NI60 647 aa6.34□□□□□ -1.39
NUP50-217ENST00000491860 GPR82Q96P67 336 aa6.34□□□□□ -1.39
NUP50-217ENST00000491860 RNF24Q9Y225 148 aa6.34□□□□□ -1.39
NUP50-217ENST00000491860 KIAA1109Q2LD37 5005 aa6.34□□□□□ -1.39
NUP50-217ENST00000491860 IGHV4-4A0A075B6R2 117 aa6.33□□□□□ -1.4
NUP50-217ENST00000491860 PITX3O75364 302 aa6.33□□□□□ -1.4
NUP50-217ENST00000491860 P0DMU3 169 aa6.33□□□□□ -1.4
NUP50-217ENST00000491860 FAM231AP0DMU4 169 aa6.33□□□□□ -1.4
NUP50-217ENST00000491860 FAM231CP0DMU5 169 aa6.33□□□□□ -1.4
NUP50-217ENST00000491860 VAMP1P23763 118 aa6.33□□□□□ -1.4
NUP50-217ENST00000491860 GALR1P47211 349 aa6.33□□□□□ -1.4
NUP50-217ENST00000491860 LYZP61626 148 aa6.33□□□□□ -1.4
NUP50-217ENST00000491860 EBLN2Q6P2I7 272 aa6.33□□□□□ -1.4
NUP50-217ENST00000491860 OR8I2Q8N0Y5 310 aa6.33□□□□□ -1.4
NUP50-217ENST00000491860 RPP25LQ8N5L8 163 aaKnown RBP6.33□□□□□ -1.4
NUP50-217ENST00000491860 THAP8Q8NA92 274 aa6.33□□□□□ -1.4
NUP50-217ENST00000491860 BPIFCQ8NFQ6 507 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms