RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 C16orf90A8MZG2 172 aa9.37□□□□□ -0.91
USF1-206ENST00000491629 INS-IGF2F8WCM5 200 aa9.37□□□□□ -0.91
USF1-206ENST00000491629 SNAPINO95295 136 aa9.37□□□□□ -0.91
USF1-206ENST00000491629 IGKV1-5P01602 117 aa9.37□□□□□ -0.91
USF1-206ENST00000491629 PSMB9P28065 219 aa9.37□□□□□ -0.91
USF1-206ENST00000491629 EMP1P54849 157 aa9.37□□□□□ -0.91
USF1-206ENST00000491629 RNF212Q495C1 297 aa9.37□□□□□ -0.91
USF1-206ENST00000491629 GDF5OSQ5U4N7 250 aa9.37□□□□□ -0.91
USF1-206ENST00000491629 C16orf54Q6UWD8 224 aa9.37□□□□□ -0.91
USF1-206ENST00000491629 OR4X1Q8NH49 305 aa9.37□□□□□ -0.91
USF1-206ENST00000491629 DKK2Q9UBU2 259 aa9.37□□□□□ -0.91
USF1-206ENST00000491629 SSR3Q9UNL2 185 aa9.37□□□□□ -0.91
USF1-206ENST00000491629 DMBT1Q9UGM3 2413 aaPredicted RBP9.37□□□□□ -0.91
USF1-206ENST00000491629 FAM90A26D6RGX4 464 aa9.36□□□□□ -0.91
USF1-206ENST00000491629 SPART-AS1P0CW21 52 aa9.36□□□□□ -0.91
USF1-206ENST00000491629 BTF3P20290 206 aaKnown RBP9.36□□□□□ -0.91
USF1-206ENST00000491629 HRH1P35367 487 aa9.36□□□□□ -0.91
USF1-206ENST00000491629 SSTP61278 116 aa9.36□□□□□ -0.91
USF1-206ENST00000491629 Q8N1X5 172 aa9.36□□□□□ -0.91
USF1-206ENST00000491629 OR5H2Q8NGV7 314 aa9.36□□□□□ -0.91
USF1-206ENST00000491629 FAM210BQ96KR6 192 aa9.36□□□□□ -0.91
USF1-206ENST00000491629 TGFBR1P36897 503 aa9.35□□□□□ -0.91
USF1-206ENST00000491629 FXYD7P58549 80 aa9.35□□□□□ -0.91
USF1-206ENST00000491629 BSXQ3C1V8 233 aa9.35□□□□□ -0.91
USF1-206ENST00000491629 SOHLH1Q5JUK2 328 aa9.35□□□□□ -0.91
USF1-206ENST00000491629 FAM222AQ5U5X8 452 aa9.35□□□□□ -0.91
USF1-206ENST00000491629 TMEM230Q96A57 120 aa9.35□□□□□ -0.91
USF1-206ENST00000491629 C1QTNF4Q9BXJ3 329 aa9.35□□□□□ -0.91
USF1-206ENST00000491629 A0A0G2JRQ6 117 aa9.34□□□□□ -0.91
USF1-206ENST00000491629 IFNA7P01567 189 aa9.34□□□□□ -0.91
USF1-206ENST00000491629 HLA-DRB4P13762 266 aa9.34□□□□□ -0.91
USF1-206ENST00000491629 SNCAP37840 140 aa9.34□□□□□ -0.91
USF1-206ENST00000491629 TAS2R46P59540 309 aa9.34□□□□□ -0.91
USF1-206ENST00000491629 TAS2R20P59543 309 aa9.34□□□□□ -0.91
USF1-206ENST00000491629 LSM3P62310 102 aaKnown RBP9.34□□□□□ -0.91
USF1-206ENST00000491629 USF2Q15853 346 aaPredicted RBP9.34□□□□□ -0.91
USF1-206ENST00000491629 TMEM88Q6PEY1 159 aa9.34□□□□□ -0.91
USF1-206ENST00000491629 TEX261Q6UWH6 196 aa9.34□□□□□ -0.91
USF1-206ENST00000491629 GSG1LQ6UXU4 331 aa9.34□□□□□ -0.91
USF1-206ENST00000491629 C9orf62Q8N4C0 152 aa9.34□□□□□ -0.91
USF1-206ENST00000491629 ZNF709Q8N972 641 aa9.34□□□□□ -0.91
USF1-206ENST00000491629 U3KQ87 197 aa9.34□□□□□ -0.91
USF1-206ENST00000491629 HLA-DRB4X5D2U9 266 aa9.34□□□□□ -0.91
USF1-206ENST00000491629 LOC100506127A0A0U1RQW1 187 aa9.33□□□□□ -0.92
USF1-206ENST00000491629 RPS10-NUDT3A0A1W2PQS6 291 aa9.33□□□□□ -0.92
USF1-206ENST00000491629 KRBOX1C9JBD0 128 aa9.33□□□□□ -0.92
USF1-206ENST00000491629 GATCO43716 136 aaKnown RBP9.33□□□□□ -0.92
USF1-206ENST00000491629 NXPH3O95157 252 aa9.33□□□□□ -0.92
USF1-206ENST00000491629 IGLC1P0CG04 106 aa9.33□□□□□ -0.92
USF1-206ENST00000491629 HTN3P15516 51 aa9.33□□□□□ -0.92
USF1-206ENST00000491629 OPRK1P41145 380 aa9.33□□□□□ -0.92
USF1-206ENST00000491629 COMMD7Q86VX2 200 aa9.33□□□□□ -0.92
USF1-206ENST00000491629 SLC35G3Q8N808 338 aa9.33□□□□□ -0.92
USF1-206ENST00000491629 ZNF680Q8NEM1 530 aa9.33□□□□□ -0.92
USF1-206ENST00000491629 TP53RKQ96S44 253 aa9.33□□□□□ -0.92
USF1-206ENST00000491629 NIPSNAP3BQ9BS92 247 aa9.33□□□□□ -0.92
USF1-206ENST00000491629 SRRQ9GZT4 340 aa9.33□□□□□ -0.92
USF1-206ENST00000491629 IGHV3OR16-12A0A075B7B8 117 aa9.32□□□□□ -0.92
USF1-206ENST00000491629 TMEM189A5PLL7 270 aa9.32□□□□□ -0.92
USF1-206ENST00000491629 SMIM9A6NGZ8 99 aa9.32□□□□□ -0.92
USF1-206ENST00000491629 IGKV3-20P01619 116 aa9.32□□□□□ -0.92
USF1-206ENST00000491629 TNFSF8P32971 234 aa9.32□□□□□ -0.92
USF1-206ENST00000491629 UCP3P55916 312 aa9.32□□□□□ -0.92
USF1-206ENST00000491629 NUTF2P61970 127 aaKnown RBP9.32□□□□□ -0.92
USF1-206ENST00000491629 DHODHQ02127 395 aa9.32□□□□□ -0.92
USF1-206ENST00000491629 PRSS54Q6PEW0 395 aa9.32□□□□□ -0.92
USF1-206ENST00000491629 C1orf158Q8N1D5 194 aa9.32□□□□□ -0.92
USF1-206ENST00000491629 GPX8Q8TED1 209 aa9.32□□□□□ -0.92
USF1-206ENST00000491629 TMEM170AQ8WVE7 144 aa9.32□□□□□ -0.92
USF1-206ENST00000491629 RBPMSQ93062 196 aaKnown RBP9.32□□□□□ -0.92
USF1-206ENST00000491629 S100A16Q96FQ6 103 aaKnown RBP9.32□□□□□ -0.92
USF1-206ENST00000491629 SEPSECSQ9HD40 501 aaKnown RBP9.32□□□□□ -0.92
USF1-206ENST00000491629 NRN1Q9NPD7 142 aa9.32□□□□□ -0.92
USF1-206ENST00000491629 RFNGQ9Y644 331 aa9.32□□□□□ -0.92
USF1-206ENST00000491629 FAT1Q14517 4588 aa9.32□□□□□ -0.92
USF1-206ENST00000491629 CORTO00230 105 aa9.31□□□□□ -0.92
USF1-206ENST00000491629 BUB3O43684 328 aa9.31□□□□□ -0.92
USF1-206ENST00000491629 PI3P19957 117 aa9.31□□□□□ -0.92
USF1-206ENST00000491629 PRSS3P35030 304 aa9.31□□□□□ -0.92
USF1-206ENST00000491629 RAB14P61106 215 aa9.31□□□□□ -0.92
USF1-206ENST00000491629 RRAS2P62070 204 aaPredicted RBP9.31□□□□□ -0.92
USF1-206ENST00000491629 SNRPD3P62318 126 aaKnown RBP9.31□□□□□ -0.92
USF1-206ENST00000491629 UBE2NLQ5JXB2 153 aa9.31□□□□□ -0.92
USF1-206ENST00000491629 TMEM69Q5SWH9 247 aa9.31□□□□□ -0.92
USF1-206ENST00000491629 LPCAT3Q6P1A2 487 aa9.31□□□□□ -0.92
USF1-206ENST00000491629 NARS2Q96I59 477 aaKnown RBP9.31□□□□□ -0.92
USF1-206ENST00000491629 SLC35B3Q9H1N7 401 aa9.31□□□□□ -0.92
USF1-206ENST00000491629 SCRT2Q9NQ03 307 aa9.31□□□□□ -0.92
USF1-206ENST00000491629 HSPB11Q9Y547 144 aa9.31□□□□□ -0.92
USF1-206ENST00000491629 V9GYH0 126 aa9.31□□□□□ -0.92
USF1-206ENST00000491629 NBDYA0A0U1RRE5 68 aa9.3□□□□□ -0.92
USF1-206ENST00000491629 F8W036 122 aa9.3□□□□□ -0.92
USF1-206ENST00000491629 RGS5O15539 181 aa9.3□□□□□ -0.92
USF1-206ENST00000491629 SCO1O75880 301 aa9.3□□□□□ -0.92
USF1-206ENST00000491629 H2AFB1P0C5Y9 115 aa9.3□□□□□ -0.92
USF1-206ENST00000491629 H2AFB2P0C5Z0 115 aa9.3□□□□□ -0.92
USF1-206ENST00000491629 NKX2-1P43699 371 aaPredicted RBP9.3□□□□□ -0.92
USF1-206ENST00000491629 RND2P52198 227 aa9.3□□□□□ -0.92
USF1-206ENST00000491629 SUB1P53999 127 aaKnown RBP eCLIP9.3□□□□□ -0.92
USF1-206ENST00000491629 YPEL3P61236 119 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms