RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 IGHV4-4A0A075B6R2 117 aa6.1□□□□□ -1.43
APOBEC3F-204ENST00000491387 TRAV6A0A075B6T7 132 aa6.1□□□□□ -1.43
APOBEC3F-204ENST00000491387 TEX13DA0A0J9YY54 714 aaPredicted RBP6.1□□□□□ -1.43
APOBEC3F-204ENST00000491387 A0A1W2PS18 150 aa6.1□□□□□ -1.43
APOBEC3F-204ENST00000491387 CCNKO75909 580 aa6.1□□□□□ -1.43
APOBEC3F-204ENST00000491387 CDS2O95674 445 aa6.1□□□□□ -1.43
APOBEC3F-204ENST00000491387 H2AFB2P0C5Z0 115 aa6.1□□□□□ -1.43
APOBEC3F-204ENST00000491387 CRYBB3P26998 211 aa6.1□□□□□ -1.43
APOBEC3F-204ENST00000491387 S100GP29377 79 aa6.1□□□□□ -1.43
APOBEC3F-204ENST00000491387 BSXQ3C1V8 233 aa6.1□□□□□ -1.43
APOBEC3F-204ENST00000491387 LEMD1Q68G75 181 aa6.1□□□□□ -1.43
APOBEC3F-204ENST00000491387 STHQ8IWL8 128 aa6.1□□□□□ -1.43
APOBEC3F-204ENST00000491387 CCDC71LQ8N9Z2 235 aa6.1□□□□□ -1.43
APOBEC3F-204ENST00000491387 RNASE11Q8TAA1 199 aaKnown RBP6.1□□□□□ -1.43
APOBEC3F-204ENST00000491387 DCANP1Q8TF63 244 aa6.1□□□□□ -1.43
APOBEC3F-204ENST00000491387 C20orf85Q9H1P6 137 aa6.1□□□□□ -1.43
APOBEC3F-204ENST00000491387 MCUBQ9NWR8 336 aa6.1□□□□□ -1.43
APOBEC3F-204ENST00000491387 ELOA3CA0A087WX78 387 aaPredicted RBP6.09□□□□□ -1.43
APOBEC3F-204ENST00000491387 C7orf66A4D0T2 115 aa6.09□□□□□ -1.43
APOBEC3F-204ENST00000491387 CORTO00230 105 aa6.09□□□□□ -1.43
APOBEC3F-204ENST00000491387 CLN5O75503 358 aa6.09□□□□□ -1.43
APOBEC3F-204ENST00000491387 NDUFB6O95139 128 aa6.09□□□□□ -1.43
APOBEC3F-204ENST00000491387 IGKV1-17P01599 117 aa6.09□□□□□ -1.43
APOBEC3F-204ENST00000491387 TBPP20226 339 aa6.09□□□□□ -1.43
APOBEC3F-204ENST00000491387 C4BPBP20851 252 aa6.09□□□□□ -1.43
APOBEC3F-204ENST00000491387 NPPCP23582 126 aa6.09□□□□□ -1.43
APOBEC3F-204ENST00000491387 OPRK1P41145 380 aa6.09□□□□□ -1.43
APOBEC3F-204ENST00000491387 DEFB1P60022 68 aa6.09□□□□□ -1.43
APOBEC3F-204ENST00000491387 CD300CQ08708 224 aa6.09□□□□□ -1.43
APOBEC3F-204ENST00000491387 Q6ZTC4 211 aa6.09□□□□□ -1.43
APOBEC3F-204ENST00000491387 LYZL2Q7Z4W2 148 aa6.09□□□□□ -1.43
APOBEC3F-204ENST00000491387 POM121L12Q8N7R1 296 aa6.09□□□□□ -1.43
APOBEC3F-204ENST00000491387 OR4X1Q8NH49 305 aa6.09□□□□□ -1.43
APOBEC3F-204ENST00000491387 SEPSECSQ9HD40 501 aaKnown RBP6.09□□□□□ -1.43
APOBEC3F-204ENST00000491387 C14orf166Q9Y224 244 aaKnown RBP6.09□□□□□ -1.43
APOBEC3F-204ENST00000491387 U3KQE9 123 aa6.09□□□□□ -1.43
APOBEC3F-204ENST00000491387 DISC1C4P0D8 188 aa6.08□□□□□ -1.44
APOBEC3F-204ENST00000491387 RTL8CO15255 209 aa6.08□□□□□ -1.44
APOBEC3F-204ENST00000491387 PRAF2O60831 178 aa6.08□□□□□ -1.44
APOBEC3F-204ENST00000491387 P0DMU3 169 aa6.08□□□□□ -1.44
APOBEC3F-204ENST00000491387 FAM231AP0DMU4 169 aa6.08□□□□□ -1.44
APOBEC3F-204ENST00000491387 FAM231CP0DMU5 169 aa6.08□□□□□ -1.44
APOBEC3F-204ENST00000491387 AKR1C4P17516 323 aa6.08□□□□□ -1.44
APOBEC3F-204ENST00000491387 SNCAP37840 140 aa6.08□□□□□ -1.44
APOBEC3F-204ENST00000491387 P2RY1P47900 373 aa6.08□□□□□ -1.44
APOBEC3F-204ENST00000491387 EIF2B2P49770 351 aaKnown RBP6.08□□□□□ -1.44
APOBEC3F-204ENST00000491387 RRAS2P62070 204 aaPredicted RBP6.08□□□□□ -1.44
APOBEC3F-204ENST00000491387 C12orf74Q32Q52 190 aa6.08□□□□□ -1.44
APOBEC3F-204ENST00000491387 LGALS9BQ3B8N2 356 aa6.08□□□□□ -1.44
APOBEC3F-204ENST00000491387 AARDQ4LEZ3 155 aa6.08□□□□□ -1.44
APOBEC3F-204ENST00000491387 PRSS54Q6PEW0 395 aa6.08□□□□□ -1.44
APOBEC3F-204ENST00000491387 ZFAND1Q8TCF1 268 aa6.08□□□□□ -1.44
APOBEC3F-204ENST00000491387 RBPMSQ93062 196 aaKnown RBP6.08□□□□□ -1.44
APOBEC3F-204ENST00000491387 METTL26Q96S19 204 aa6.08□□□□□ -1.44
APOBEC3F-204ENST00000491387 RABAC1Q9UI14 185 aa6.08□□□□□ -1.44
APOBEC3F-204ENST00000491387 ABCA13Q86UQ4 5058 aa6.08□□□□□ -1.44
APOBEC3F-204ENST00000491387 NACAE9PAV3 2078 aa6.08□□□□□ -1.44
APOBEC3F-204ENST00000491387 TRAV30A0A087WSZ9 112 aa6.07□□□□□ -1.44
APOBEC3F-204ENST00000491387 HELTA6NFD8 242 aa6.07□□□□□ -1.44
APOBEC3F-204ENST00000491387 IL5P05113 134 aa6.07□□□□□ -1.44
APOBEC3F-204ENST00000491387 RND2P52198 227 aa6.07□□□□□ -1.44
APOBEC3F-204ENST00000491387 SUB1P53999 127 aaKnown RBP eCLIP6.07□□□□□ -1.44
APOBEC3F-204ENST00000491387 RPL11P62913 178 aaKnown RBP6.07□□□□□ -1.44
APOBEC3F-204ENST00000491387 USF2Q15853 346 aaPredicted RBP6.07□□□□□ -1.44
APOBEC3F-204ENST00000491387 NMSQ5H8A3 153 aa6.07□□□□□ -1.44
APOBEC3F-204ENST00000491387 RRNAD1Q96FB5 475 aaKnown RBP6.07□□□□□ -1.44
APOBEC3F-204ENST00000491387 ST6GAL2Q96JF0 529 aa6.07□□□□□ -1.44
APOBEC3F-204ENST00000491387 FAM210BQ96KR6 192 aa6.07□□□□□ -1.44
APOBEC3F-204ENST00000491387 RAB40CQ96S21 281 aa6.07□□□□□ -1.44
APOBEC3F-204ENST00000491387 NEU1Q99519 415 aa6.07□□□□□ -1.44
APOBEC3F-204ENST00000491387 PDCD10Q9BUL8 212 aa6.07□□□□□ -1.44
APOBEC3F-204ENST00000491387 C1QTNF4Q9BXJ3 329 aa6.07□□□□□ -1.44
APOBEC3F-204ENST00000491387 MED28Q9H204 178 aa6.07□□□□□ -1.44
APOBEC3F-204ENST00000491387 RBKSQ9H477 322 aa6.07□□□□□ -1.44
APOBEC3F-204ENST00000491387 HEYLQ9NQ87 328 aaPredicted RBP6.07□□□□□ -1.44
APOBEC3F-204ENST00000491387 SCP2D1Q9UJQ7 156 aa6.07□□□□□ -1.44
APOBEC3F-204ENST00000491387 FLVCR2Q9UPI3 526 aa6.07□□□□□ -1.44
APOBEC3F-204ENST00000491387 TMEM56-RWDD3S4R434 201 aa6.07□□□□□ -1.44
APOBEC3F-204ENST00000491387 DEFB131BA0A096LNP1 70 aa6.06□□□□□ -1.44
APOBEC3F-204ENST00000491387 PRSS29PA6NIE9 313 aa6.06□□□□□ -1.44
APOBEC3F-204ENST00000491387 KNCNA6PVL3 124 aa6.06□□□□□ -1.44
APOBEC3F-204ENST00000491387 CEBPZOSA8MTT3 80 aa6.06□□□□□ -1.44
APOBEC3F-204ENST00000491387 SCGB2A1O75556 95 aa6.06□□□□□ -1.44
APOBEC3F-204ENST00000491387 ATG12O94817 140 aa6.06□□□□□ -1.44
APOBEC3F-204ENST00000491387 ZNF688P0C7X2 276 aa6.06□□□□□ -1.44
APOBEC3F-204ENST00000491387 IGLC1P0CG04 106 aa6.06□□□□□ -1.44
APOBEC3F-204ENST00000491387 IAPPP10997 89 aa6.06□□□□□ -1.44
APOBEC3F-204ENST00000491387 AP2S1P53680 142 aaPredicted RBP6.06□□□□□ -1.44
APOBEC3F-204ENST00000491387 SPCS3P61009 180 aa6.06□□□□□ -1.44
APOBEC3F-204ENST00000491387 YPEL3P61236 119 aaPredicted RBP6.06□□□□□ -1.44
APOBEC3F-204ENST00000491387 NUTF2P61970 127 aaKnown RBP6.06□□□□□ -1.44
APOBEC3F-204ENST00000491387 ACTL10Q5JWF8 245 aa6.06□□□□□ -1.44
APOBEC3F-204ENST00000491387 C16orf54Q6UWD8 224 aa6.06□□□□□ -1.44
APOBEC3F-204ENST00000491387 ZNF705AQ6ZN79 300 aaPredicted RBP6.06□□□□□ -1.44
APOBEC3F-204ENST00000491387 Q6ZR54 194 aa6.06□□□□□ -1.44
APOBEC3F-204ENST00000491387 TMED4Q7Z7H5 227 aa6.06□□□□□ -1.44
APOBEC3F-204ENST00000491387 TCTE3Q8IZS6 198 aa6.06□□□□□ -1.44
APOBEC3F-204ENST00000491387 SLC24A4Q8NFF2 622 aa6.06□□□□□ -1.44
APOBEC3F-204ENST00000491387 STXBP6Q8NFX7 210 aa6.06□□□□□ -1.44
APOBEC3F-204ENST00000491387 GLMPQ8WWB7 406 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms