RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 LINC00696Q6ZRV3 163 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 ZNF826PQ6ZT77 177 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 ASCL5Q7RTU5 278 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 ATP5L2Q7Z4Y8 100 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 S100A7AQ86SG5 101 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 WDR86Q86TI4 376 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 MYPOPQ86VE0 399 aaPredicted RBP1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 OR8I2Q8N0Y5 310 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 BATF2Q8N1L9 274 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 ZCCHC24Q8N2G6 241 aaKnown RBP1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 CD177Q8N6Q3 437 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 ARL6IP6Q8N6S5 226 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 C8orf31Q8N9H6 132 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 NHLRC2Q8NBF2 726 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 MDS2Q8NDY4 140 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 OR4S2Q8NH73 311 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 OR4A5Q8NH83 315 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 CT45A3Q8NHU0 189 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 VSTM2AQ8TAG5 236 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 MRGPRDQ8TDS7 321 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 FAM222BQ8WU58 562 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 TSKUQ8WUA8 353 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 LRRC29Q8WV35 223 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 TMEM186Q96B77 213 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 CHCHD1Q96BP2 118 aaKnown RBP1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 STARD4Q96DR4 205 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 COQ2Q96H96 371 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 GRAMD2BQ96HH9 432 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 GPR82Q96P67 336 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 MGST2Q99735 147 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 RNF5Q99942 180 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 PMCHL2Q9BQD1 86 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 GGTLC1Q9BX51 225 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 MRPL32Q9BYC8 188 aaKnown RBP1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 GFRA4Q9GZZ7 299 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 MS4A6AQ9H2W1 248 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 SLC25A22Q9H936 323 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 PLEKHA3Q9HB20 300 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 ZNF71Q9NQZ8 489 aaPredicted RBP1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 TMEM14BQ9NUH8 114 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 ZNF586Q9NXT0 402 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 IDI2-AS1Q9NZ38 188 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 GNG12Q9UBI6 72 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 TP53TG3Q9ULZ0 132 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 EPDR1Q9UM22 224 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 PSG11Q9UQ72 335 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 LAMTOR2Q9Y2Q5 125 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 AMMECR1Q9Y4X0 333 aaPredicted RBP1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 YTHDF2Q9Y5A9 579 aaKnown RBP1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 OR51B2Q9Y5P1 312 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 SOX21Q9Y651 276 aaPredicted RBP1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 V9GYV3 84 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 C5orf42Q9H799 3197 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 ZGRF1Q86YA3 2104 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 TRANK1O15050 2925 aa1.63□□□□□ -2.15
SNRNP40-207ENST00000491106 TNCP24821 2201 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 TRBV20OR9-2A0A075B6H5 130 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 IGKV1D-17A0A075B6S4 117 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 TRAV30A0A087WSZ9 112 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 TRAV3A0A0B4J244 114 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 TRAV17A0A0B4J275 112 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 A0A0G2JMM0 328 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 KIR2DL5BA0A0G2JN68 375 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 KIR2DL5BA0A0G2JPC4 375 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 A0A1B0GW15 77 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 A0A1W2PN81 502 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 A0A1W2PPB8 328 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 A0A1W2PRS3 328 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 hADV38S2A0JD32 116 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 GRIFINA4D1Z8 144 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 CBY3A6NI87 242 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 C15orf61A6NNL5 157 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 KIR3DP1A8MWS1 328 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 SRRM5B3KS81 715 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 H0YJW9 148 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 K7EN84 100 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 M0R1X1 148 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 SLC17A3O00476 420 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 VCYO14598 125 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 SIVA1O15304 175 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 CD5LO43866 347 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 TIMM8AO60220 97 aaPredicted RBP1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 ZNF324O75467 553 aaPredicted RBP1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 HSBP1O75506 76 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 OR2J3O76001 311 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 CA2P00918 260 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 IGLV2-8P01709 118 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 SNRPCP09234 159 aaKnown RBP1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 NBEAP1P0C6P0 100 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 C3orf79P0CE67 100 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 FAM106CPP0CH98 169 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 CT45A6P0DMU7 189 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 CT45A5P0DMU8 189 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 CT45A7P0DMV0 189 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 HIST1H1EP10412 219 aaKnown RBP1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 TDGF1P13385 188 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 USF1P22415 310 aaPredicted RBP1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 CBLN1P23435 193 aa1.62□□□□□ -2.15
SNRNP40-207ENST00000491106 G0S2P27469 103 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms