RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 SHANK1Q9Y566 2161 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 NPIPB5A8MRT5 1133 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 GPR183P32249 361 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 YPEL3P61236 119 aaPredicted RBP5.91□□□□□ -1.46
NPHP3-208ENST00000490993 RIF1Q5UIP0 2472 aaKnown RBP5.91□□□□□ -1.46
NPHP3-208ENST00000490993 SAMD13Q5VXD3 122 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 ZNF329Q86UD4 541 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 TMEM116Q8NCL8 245 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 TSKUQ8WUA8 353 aa5.91□□□□□ -1.46
NPHP3-208ENST00000490993 RNASE7Q9H1E1 156 aaKnown RBP5.91□□□□□ -1.46
NPHP3-208ENST00000490993 PGPEP1LA6NFU8 196 aa5.9□□□□□ -1.46
NPHP3-208ENST00000490993 LY6HO94772 140 aa5.9□□□□□ -1.46
NPHP3-208ENST00000490993 PFN1P07737 140 aaKnown RBP5.9□□□□□ -1.46
NPHP3-208ENST00000490993 CD24P25063 80 aa5.9□□□□□ -1.46
NPHP3-208ENST00000490993 BRWD1-AS2P59051 145 aa5.9□□□□□ -1.46
NPHP3-208ENST00000490993 RHOGP84095 191 aa5.9□□□□□ -1.46
NPHP3-208ENST00000490993 RBPMS2Q6ZRY4 209 aaKnown RBP5.9□□□□□ -1.46
NPHP3-208ENST00000490993 C19orf35Q6ZS72 473 aa5.9□□□□□ -1.46
NPHP3-208ENST00000490993 MAP1LC3CQ9BXW4 147 aa5.9□□□□□ -1.46
NPHP3-208ENST00000490993 TMEM191AQ9H0A3 160 aa5.9□□□□□ -1.46
NPHP3-208ENST00000490993 OR2T8A6NH00 312 aa5.9□□□□□ -1.46
NPHP3-208ENST00000490993 ARL3P36405 182 aa5.9□□□□□ -1.46
NPHP3-208ENST00000490993 GNG5P63218 68 aa5.9□□□□□ -1.46
NPHP3-208ENST00000490993 LY6EQ16553 131 aa5.9□□□□□ -1.46
NPHP3-208ENST00000490993 HSPB9Q9BQS6 159 aa5.9□□□□□ -1.46
NPHP3-208ENST00000490993 SLC25A2Q9BXI2 301 aa5.9□□□□□ -1.46
NPHP3-208ENST00000490993 DIAPH2-AS1Q14236 149 aa5.9□□□□□ -1.47
NPHP3-208ENST00000490993 MED12LQ86YW9 2145 aa5.9□□□□□ -1.47
NPHP3-208ENST00000490993 ZNF295-AS1Q8N0V1 137 aa5.9□□□□□ -1.47
NPHP3-208ENST00000490993 VN1R17PQ8TDU5 208 aa5.9□□□□□ -1.47
NPHP3-208ENST00000490993 BPESC1Q9GZL8 116 aa5.9□□□□□ -1.47
NPHP3-208ENST00000490993 PRO1933Q9H354 126 aa5.9□□□□□ -1.47
NPHP3-208ENST00000490993 TRBV7-1A0A0A6YYK4 115 aa5.9□□□□□ -1.47
NPHP3-208ENST00000490993 H0Y8G0 127 aa5.9□□□□□ -1.47
NPHP3-208ENST00000490993 TCRAP04437 139 aa5.9□□□□□ -1.47
NPHP3-208ENST00000490993 GRNP28799 593 aaKnown RBP5.9□□□□□ -1.47
NPHP3-208ENST00000490993 OR10J3Q5JRS4 329 aa5.9□□□□□ -1.47
NPHP3-208ENST00000490993 DMRTC2Q8IXT2 367 aaPredicted RBP5.9□□□□□ -1.47
NPHP3-208ENST00000490993 HIST3H2BBQ8N257 126 aa5.9□□□□□ -1.47
NPHP3-208ENST00000490993 SHANK2-AS3Q9BTD1 123 aa5.9□□□□□ -1.47
NPHP3-208ENST00000490993 IGHV3OR16-10A0A075B7F0 116 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 TRAV20A0A0B4J274 112 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 IGHV3-23P01764 117 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 TYMSP04818 313 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 SLC25A16P16260 332 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 CNTFRP26992 372 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 CLEC19AQ6UXS0 136 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 TCF23Q7RTU1 214 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 DPF1Q92782 380 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 SGK494Q96LW2 274 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 TMEM14CQ9P0S9 112 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 OTOGLQ3ZCN5 2332 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 NCKAP5O14513 1909 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 B4DSR2 109 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 DIRC3C9JPN6 131 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 PROP1O75360 226 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 SOD3P08294 240 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 GATA3P23771 443 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 PDE6HQ13956 83 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 PMCHL1Q16048 86 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 DTX2Q86UW9 622 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 ZNF738Q8NE65 137 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 S4R3C0 116 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 SPTA1P02549 2419 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 TRAV41A0A0B4J266 112 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 IGLC7A0M8Q6 106 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 C22orf46C9J442 243 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 OR5AL1P0C617 328 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 ADMP35318 185 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 DNLZQ5SXM8 178 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 LEMD1Q68G75 181 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 NPBQ8NG41 125 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 FAM110DQ8TAY7 271 aaPredicted RBP5.89□□□□□ -1.47
NPHP3-208ENST00000490993 TBX15Q96SF7 602 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 PSG8Q9UQ74 426 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 ACACAQ13085 2346 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 A0A1B0GUT8 65 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 GRIFINA4D1Z8 144 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 HIGD1CA8MV81 97 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 TWIST1Q15672 202 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 NUDT10Q8NFP7 164 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 NUDT11Q96G61 164 aa5.89□□□□□ -1.47
NPHP3-208ENST00000490993 FAM223BA6NKX1 122 aa5.88□□□□□ -1.47
NPHP3-208ENST00000490993 IGLV1-47P01700 117 aa5.88□□□□□ -1.47
NPHP3-208ENST00000490993 IGLV2-23P01705 113 aa5.88□□□□□ -1.47
NPHP3-208ENST00000490993 IGHV2-5P01817 119 aa5.88□□□□□ -1.47
NPHP3-208ENST00000490993 HNRNPA3P51991 378 aaKnown RBP5.88□□□□□ -1.47
NPHP3-208ENST00000490993 C22orf34Q6ZV56 151 aa5.88□□□□□ -1.47
NPHP3-208ENST00000490993 FAM223AQ8IWN6 122 aa5.88□□□□□ -1.47
NPHP3-208ENST00000490993 SCRT1Q9BWW7 348 aa5.88□□□□□ -1.47
NPHP3-208ENST00000490993 TMSB15BA0A087X1C1 80 aa5.88□□□□□ -1.47
NPHP3-208ENST00000490993 SAA4P35542 130 aa5.88□□□□□ -1.47
NPHP3-208ENST00000490993 LHFPL4Q7Z7J7 247 aa5.88□□□□□ -1.47
NPHP3-208ENST00000490993 KCNS1Q96KK3 526 aa5.88□□□□□ -1.47
NPHP3-208ENST00000490993 TPSG1Q9NRR2 321 aa5.88□□□□□ -1.47
NPHP3-208ENST00000490993 GTF3C1Q12789 2109 aa5.88□□□□□ -1.47
NPHP3-208ENST00000490993 INTS1Q8N201 2190 aaKnown RBP5.88□□□□□ -1.47
NPHP3-208ENST00000490993 TRAV40A0A0B4J280 105 aa5.88□□□□□ -1.47
NPHP3-208ENST00000490993 NDUFB8O95169 186 aa5.88□□□□□ -1.47
NPHP3-208ENST00000490993 C15orf32Q32M92 178 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms