RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 SSBP1Q04837 148 aaKnown RBP12.84□□□□□ -0.35
YIPF3-208ENST00000490447 SURF2Q15527 256 aaPredicted RBP12.84□□□□□ -0.35
YIPF3-208ENST00000490447 USF2Q15853 346 aaPredicted RBP12.84□□□□□ -0.35
YIPF3-208ENST00000490447 TMEM268Q5VZI3 342 aa12.84□□□□□ -0.35
YIPF3-208ENST00000490447 FAAP20Q6NZ36 180 aa12.84□□□□□ -0.35
YIPF3-208ENST00000490447 SIGLEC15Q6ZMC9 328 aa12.84□□□□□ -0.35
YIPF3-208ENST00000490447 LINC00336Q6ZUF6 198 aa12.84□□□□□ -0.35
YIPF3-208ENST00000490447 SELENOHQ8IZQ5 122 aaKnown RBP12.84□□□□□ -0.35
YIPF3-208ENST00000490447 LHFPL5Q8TAF8 219 aa12.84□□□□□ -0.35
YIPF3-208ENST00000490447 ACY3Q96HD9 319 aa12.84□□□□□ -0.35
YIPF3-208ENST00000490447 CELA1Q9UNI1 258 aa12.84□□□□□ -0.35
YIPF3-208ENST00000490447 FAM90A26D6RGX4 464 aa12.83□□□□□ -0.36
YIPF3-208ENST00000490447 NXPH3O95157 252 aa12.83□□□□□ -0.36
YIPF3-208ENST00000490447 AMBPP02760 352 aa12.83□□□□□ -0.36
YIPF3-208ENST00000490447 RD3LP0DJH9 198 aa12.83□□□□□ -0.36
YIPF3-208ENST00000490447 PYDC2Q56P42 97 aa12.83□□□□□ -0.36
YIPF3-208ENST00000490447 ZNF767PQ75MW2 155 aa12.83□□□□□ -0.36
YIPF3-208ENST00000490447 NPIPB3Q92617 1050 aa12.83□□□□□ -0.36
YIPF3-208ENST00000490447 GPR146Q96CH1 333 aa12.83□□□□□ -0.36
YIPF3-208ENST00000490447 RTBDNQ9BSG5 229 aaPredicted RBP12.83□□□□□ -0.36
YIPF3-208ENST00000490447 SEPSECSQ9HD40 501 aaKnown RBP12.83□□□□□ -0.36
YIPF3-208ENST00000490447 XCL2Q9UBD3 114 aa12.83□□□□□ -0.36
YIPF3-208ENST00000490447 DNAH2Q9P225 4427 aa12.83□□□□□ -0.36
YIPF3-208ENST00000490447 BUB3O43684 328 aa12.82□□□□□ -0.36
YIPF3-208ENST00000490447 TOMM40O96008 361 aa12.82□□□□□ -0.36
YIPF3-208ENST00000490447 P0DMU3 169 aa12.82□□□□□ -0.36
YIPF3-208ENST00000490447 FAM231AP0DMU4 169 aa12.82□□□□□ -0.36
YIPF3-208ENST00000490447 FAM231CP0DMU5 169 aa12.82□□□□□ -0.36
YIPF3-208ENST00000490447 NUP62P37198 522 aaPredicted RBP12.82□□□□□ -0.36
YIPF3-208ENST00000490447 NDUFAF3Q9BU61 184 aa12.82□□□□□ -0.36
YIPF3-208ENST00000490447 SRRQ9GZT4 340 aa12.82□□□□□ -0.36
YIPF3-208ENST00000490447 PFDN2Q9UHV9 154 aa12.82□□□□□ -0.36
YIPF3-208ENST00000490447 FAT2Q9NYQ8 4349 aa12.82□□□□□ -0.36
YIPF3-208ENST00000490447 CRYM-AS1A6NIL9 109 aa12.81□□□□□ -0.36
YIPF3-208ENST00000490447 IFNA10P01566 189 aa12.81□□□□□ -0.36
YIPF3-208ENST00000490447 SULT1A3P0DMM9 295 aa12.81□□□□□ -0.36
YIPF3-208ENST00000490447 SULT1A4P0DMN0 295 aa12.81□□□□□ -0.36
YIPF3-208ENST00000490447 ZNF79Q15937 498 aa12.81□□□□□ -0.36
YIPF3-208ENST00000490447 C12orf74Q32Q52 190 aa12.81□□□□□ -0.36
YIPF3-208ENST00000490447 CCDC32Q9BV29 185 aa12.81□□□□□ -0.36
YIPF3-208ENST00000490447 AGRNO00468 2067 aa12.81□□□□□ -0.36
YIPF3-208ENST00000490447 H3BMM0 161 aa12.8□□□□□ -0.36
YIPF3-208ENST00000490447 AKAIN1P0CW23 69 aa12.8□□□□□ -0.36
YIPF3-208ENST00000490447 OR51G1Q8NGK1 321 aa12.8□□□□□ -0.36
YIPF3-208ENST00000490447 SMIM4Q8WVI0 70 aa12.8□□□□□ -0.36
YIPF3-208ENST00000490447 RNF125Q96EQ8 232 aa12.8□□□□□ -0.36
YIPF3-208ENST00000490447 PRRT1Q99946 306 aa12.8□□□□□ -0.36
YIPF3-208ENST00000490447 PBDC1Q9BVG4 233 aa12.8□□□□□ -0.36
YIPF3-208ENST00000490447 KCNIP3Q9Y2W7 256 aa12.8□□□□□ -0.36
YIPF3-208ENST00000490447 TMEM56-RWDD3S4R434 201 aa12.8□□□□□ -0.36
YIPF3-208ENST00000490447 PSG1P11464 419 aa12.79□□□□□ -0.36
YIPF3-208ENST00000490447 HLA-DRB4P13762 266 aa12.79□□□□□ -0.36
YIPF3-208ENST00000490447 NKX2-1P43699 371 aaPredicted RBP12.79□□□□□ -0.36
YIPF3-208ENST00000490447 NMSQ5H8A3 153 aa12.79□□□□□ -0.36
YIPF3-208ENST00000490447 OR4C16Q8NGL9 310 aa12.79□□□□□ -0.36
YIPF3-208ENST00000490447 TMEM170AQ8WVE7 144 aa12.79□□□□□ -0.36
YIPF3-208ENST00000490447 IL22RA2Q969J5 263 aa12.79□□□□□ -0.36
YIPF3-208ENST00000490447 GPR132Q9UNW8 380 aa12.79□□□□□ -0.36
YIPF3-208ENST00000490447 U3KQ87 197 aa12.79□□□□□ -0.36
YIPF3-208ENST00000490447 HLA-DRB4X5D2U9 266 aa12.79□□□□□ -0.36
YIPF3-208ENST00000490447 KIAA1109Q2LD37 5005 aa12.79□□□□□ -0.36
YIPF3-208ENST00000490447 TMEM189A5PLL7 270 aa12.78□□□□□ -0.36
YIPF3-208ENST00000490447 SPART-AS1P0CW21 52 aa12.78□□□□□ -0.36
YIPF3-208ENST00000490447 POM121L12Q8N7R1 296 aa12.78□□□□□ -0.36
YIPF3-208ENST00000490447 DTD1Q8TEA8 209 aa12.78□□□□□ -0.36
YIPF3-208ENST00000490447 IGHV3OR16-12A0A075B7B8 117 aa12.77□□□□□ -0.37
YIPF3-208ENST00000490447 ZFP92A6NM28 416 aa12.77□□□□□ -0.37
YIPF3-208ENST00000490447 IGKV3-20P01619 116 aa12.77□□□□□ -0.37
YIPF3-208ENST00000490447 ID1P41134 155 aa12.77□□□□□ -0.37
YIPF3-208ENST00000490447 EMP1P54849 157 aa12.77□□□□□ -0.37
YIPF3-208ENST00000490447 KLF9Q13886 244 aaPredicted RBP12.77□□□□□ -0.37
YIPF3-208ENST00000490447 TRIQKQ629K1 86 aa12.77□□□□□ -0.37
YIPF3-208ENST00000490447 OR8G2PQ6IF36 304 aa12.77□□□□□ -0.37
YIPF3-208ENST00000490447 LGI3Q8N145 548 aa12.77□□□□□ -0.37
YIPF3-208ENST00000490447 OR51S1Q8NGJ8 323 aa12.77□□□□□ -0.37
YIPF3-208ENST00000490447 COQ8AQ8NI60 647 aa12.77□□□□□ -0.37
YIPF3-208ENST00000490447 NEU1Q99519 415 aa12.77□□□□□ -0.37
YIPF3-208ENST00000490447 PKHD1P08F94 4074 aa12.77□□□□□ -0.37
YIPF3-208ENST00000490447 PCLOQ9Y6V0 5065 aa12.76□□□□□ -0.37
YIPF3-208ENST00000490447 INPP1P49441 399 aa12.76□□□□□ -0.37
YIPF3-208ENST00000490447 CCR6P51684 374 aa12.76□□□□□ -0.37
YIPF3-208ENST00000490447 SLC35E1Q96K37 410 aa12.76□□□□□ -0.37
YIPF3-208ENST00000490447 LINC00052Q96N35 136 aa12.76□□□□□ -0.37
YIPF3-208ENST00000490447 SCGB3A2Q96PL1 93 aa12.76□□□□□ -0.37
YIPF3-208ENST00000490447 SDHCQ99643 169 aaPredicted RBP12.76□□□□□ -0.37
YIPF3-208ENST00000490447 SCP2D1Q9UJQ7 156 aa12.76□□□□□ -0.37
YIPF3-208ENST00000490447 TEX48A0A1B0GUV7 120 aa12.75□□□□□ -0.37
YIPF3-208ENST00000490447 SMIM9A6NGZ8 99 aa12.75□□□□□ -0.37
YIPF3-208ENST00000490447 UPK1BO75841 260 aa12.75□□□□□ -0.37
YIPF3-208ENST00000490447 IFNA21P01568 189 aa12.75□□□□□ -0.37
YIPF3-208ENST00000490447 FABP1P07148 127 aa12.75□□□□□ -0.37
YIPF3-208ENST00000490447 ANXA3P12429 323 aa12.75□□□□□ -0.37
YIPF3-208ENST00000490447 IL7P13232 177 aa12.75□□□□□ -0.37
YIPF3-208ENST00000490447 AP3S2P59780 193 aa12.75□□□□□ -0.37
YIPF3-208ENST00000490447 SMCO1Q147U7 214 aa12.75□□□□□ -0.37
YIPF3-208ENST00000490447 ZNF705AQ6ZN79 300 aaPredicted RBP12.75□□□□□ -0.37
YIPF3-208ENST00000490447 FOXI2Q6ZQN5 318 aa12.75□□□□□ -0.37
YIPF3-208ENST00000490447 UBE2DNLQ8IWF7 75 aa12.75□□□□□ -0.37
YIPF3-208ENST00000490447 DEDD2Q8WXF8 326 aa12.75□□□□□ -0.37
YIPF3-208ENST00000490447 RBKSQ9H477 322 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms