RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 FCN2Q15485 313 aa10.81□□□□□ -0.68
SRGAP3-208ENST00000490348 TMEM182Q6ZP80 229 aaPredicted RBP10.81□□□□□ -0.68
SRGAP3-208ENST00000490348 Q8N1Y9 231 aa10.81□□□□□ -0.68
SRGAP3-208ENST00000490348 OR10P1Q8NGE3 313 aa10.81□□□□□ -0.68
SRGAP3-208ENST00000490348 ST8SIA2Q92186 375 aa10.81□□□□□ -0.68
SRGAP3-208ENST00000490348 TRGV9Q99603 122 aa10.81□□□□□ -0.68
SRGAP3-208ENST00000490348 GINS3Q9BRX5 216 aa10.81□□□□□ -0.68
SRGAP3-208ENST00000490348 IGHV3-66A0A0C4DH42 116 aa10.8□□□□□ -0.68
SRGAP3-208ENST00000490348 IL4P05112 153 aa10.8□□□□□ -0.68
SRGAP3-208ENST00000490348 DLK1P80370 383 aa10.8□□□□□ -0.68
SRGAP3-208ENST00000490348 CYCSP99999 105 aaKnown RBP10.8□□□□□ -0.68
SRGAP3-208ENST00000490348 TMEM144Q7Z5S9 345 aa10.8□□□□□ -0.68
SRGAP3-208ENST00000490348 TMEM252Q8N6L7 170 aa10.8□□□□□ -0.68
SRGAP3-208ENST00000490348 Q8WTZ3 238 aa10.8□□□□□ -0.68
SRGAP3-208ENST00000490348 FAM210AQ96ND0 272 aa10.8□□□□□ -0.68
SRGAP3-208ENST00000490348 RNF126Q9BV68 326 aa10.8□□□□□ -0.68
SRGAP3-208ENST00000490348 VSIRQ9H7M9 311 aa10.8□□□□□ -0.68
SRGAP3-208ENST00000490348 NBEAL2Q6ZNJ1 2754 aa10.79□□□□□ -0.68
SRGAP3-208ENST00000490348 SMCO3A2RU48 225 aa10.79□□□□□ -0.68
SRGAP3-208ENST00000490348 PVALBP20472 110 aaPredicted RBP10.79□□□□□ -0.68
SRGAP3-208ENST00000490348 AKR1C1Q04828 323 aa10.79□□□□□ -0.68
SRGAP3-208ENST00000490348 FAM90A2PQ658T7 463 aa10.79□□□□□ -0.68
SRGAP3-208ENST00000490348 TMEM217Q8N7C4 229 aa10.79□□□□□ -0.68
SRGAP3-208ENST00000490348 OR51G1Q8NGK1 321 aa10.79□□□□□ -0.68
SRGAP3-208ENST00000490348 MED28Q9H204 178 aa10.79□□□□□ -0.68
SRGAP3-208ENST00000490348 U3KQE9 123 aa10.79□□□□□ -0.68
SRGAP3-208ENST00000490348 FNDC10F2Z333 226 aa10.78□□□□□ -0.68
SRGAP3-208ENST00000490348 MPC2O95563 127 aa10.78□□□□□ -0.68
SRGAP3-208ENST00000490348 NPPCP23582 126 aa10.78□□□□□ -0.68
SRGAP3-208ENST00000490348 GATA2P23769 480 aaPredicted RBP10.78□□□□□ -0.68
SRGAP3-208ENST00000490348 SULT1A1P50225 295 aa10.78□□□□□ -0.68
SRGAP3-208ENST00000490348 OR2F1Q13607 317 aa10.78□□□□□ -0.68
SRGAP3-208ENST00000490348 STPG3Q8N7X2 389 aa10.78□□□□□ -0.68
SRGAP3-208ENST00000490348 RNF125Q96EQ8 232 aa10.78□□□□□ -0.68
SRGAP3-208ENST00000490348 METTL26Q96S19 204 aa10.78□□□□□ -0.68
SRGAP3-208ENST00000490348 TRAV25A0A0B4J276 109 aa10.77□□□□□ -0.68
SRGAP3-208ENST00000490348 E5RGE8 158 aa10.77□□□□□ -0.68
SRGAP3-208ENST00000490348 TSPAN4O14817 238 aa10.77□□□□□ -0.68
SRGAP3-208ENST00000490348 CD7P09564 240 aa10.77□□□□□ -0.68
SRGAP3-208ENST00000490348 SLC38A11Q08AI6 406 aa10.77□□□□□ -0.68
SRGAP3-208ENST00000490348 GUCA2BQ16661 112 aa10.77□□□□□ -0.68
SRGAP3-208ENST00000490348 GGACTQ9BVM4 153 aa10.77□□□□□ -0.68
SRGAP3-208ENST00000490348 HUWE1Q7Z6Z7 4374 aaKnown RBP10.77□□□□□ -0.69
SRGAP3-208ENST00000490348 DFFBO76075 338 aa10.77□□□□□ -0.69
SRGAP3-208ENST00000490348 P2RY1P47900 373 aa10.77□□□□□ -0.69
SRGAP3-208ENST00000490348 NHLH2Q02577 135 aa10.77□□□□□ -0.69
SRGAP3-208ENST00000490348 VWC2Q2TAL6 325 aa10.77□□□□□ -0.69
SRGAP3-208ENST00000490348 DEFB121Q5J5C9 76 aa10.77□□□□□ -0.69
SRGAP3-208ENST00000490348 RBPMS2Q6ZRY4 209 aaKnown RBP10.77□□□□□ -0.69
SRGAP3-208ENST00000490348 NPVFQ9HCQ7 196 aa10.77□□□□□ -0.69
SRGAP3-208ENST00000490348 TENM3Q9P273 2699 aa10.76□□□□□ -0.69
SRGAP3-208ENST00000490348 RLN2P04090 185 aa10.76□□□□□ -0.69
SRGAP3-208ENST00000490348 LYZP61626 148 aa10.76□□□□□ -0.69
SRGAP3-208ENST00000490348 EWSR1Q01844 656 aaKnown RBP eCLIP10.76□□□□□ -0.69
SRGAP3-208ENST00000490348 PBDC1Q9BVG4 233 aa10.76□□□□□ -0.69
SRGAP3-208ENST00000490348 WFDC10AQ9H1F0 79 aa10.76□□□□□ -0.69
SRGAP3-208ENST00000490348 C19orf73Q9NVV2 129 aa10.76□□□□□ -0.69
SRGAP3-208ENST00000490348 MBD2Q9UBB5 411 aa10.76□□□□□ -0.69
SRGAP3-208ENST00000490348 BUB3O43684 328 aa10.75□□□□□ -0.69
SRGAP3-208ENST00000490348 CD81P60033 236 aa10.75□□□□□ -0.69
SRGAP3-208ENST00000490348 Q5BKY6 102 aa10.75□□□□□ -0.69
SRGAP3-208ENST00000490348 TEPPQ6URK8 271 aa10.75□□□□□ -0.69
SRGAP3-208ENST00000490348 CYP2G1PQ6ZSU1 146 aa10.75□□□□□ -0.69
SRGAP3-208ENST00000490348 TCF24Q7RTU0 167 aa10.75□□□□□ -0.69
SRGAP3-208ENST00000490348 GTSCR1Q86UQ5 136 aa10.75□□□□□ -0.69
SRGAP3-208ENST00000490348 STX12Q86Y82 276 aa10.75□□□□□ -0.69
SRGAP3-208ENST00000490348 MGST2Q99735 147 aa10.75□□□□□ -0.69
SRGAP3-208ENST00000490348 SPAG8Q99932 426 aaPredicted RBP10.75□□□□□ -0.69
SRGAP3-208ENST00000490348 NEURL2Q9BR09 285 aa10.75□□□□□ -0.69
SRGAP3-208ENST00000490348 RABAC1Q9UI14 185 aa10.75□□□□□ -0.69
SRGAP3-208ENST00000490348 SMAD5-AS1Q9Y6J3 95 aa10.75□□□□□ -0.69
SRGAP3-208ENST00000490348 STAB2Q8WWQ8 2551 aa10.75□□□□□ -0.69
SRGAP3-208ENST00000490348 IGKV3-7A0A075B6H7 116 aa10.74□□□□□ -0.69
SRGAP3-208ENST00000490348 FABP1P07148 127 aa10.74□□□□□ -0.69
SRGAP3-208ENST00000490348 IGHV4-30-4P0DP06 118 aa10.74□□□□□ -0.69
SRGAP3-208ENST00000490348 LYL1P12980 280 aa10.74□□□□□ -0.69
SRGAP3-208ENST00000490348 S100A11P31949 105 aa10.74□□□□□ -0.69
SRGAP3-208ENST00000490348 LAMTOR1Q6IAA8 161 aa10.74□□□□□ -0.69
SRGAP3-208ENST00000490348 C16orf54Q6UWD8 224 aa10.74□□□□□ -0.69
SRGAP3-208ENST00000490348 GLMPQ8WWB7 406 aa10.74□□□□□ -0.69
SRGAP3-208ENST00000490348 A0A1W2PS18 150 aa10.73□□□□□ -0.69
SRGAP3-208ENST00000490348 PET100P0DJ07 73 aa10.73□□□□□ -0.69
SRGAP3-208ENST00000490348 EIF2B2P49770 351 aaKnown RBP10.73□□□□□ -0.69
SRGAP3-208ENST00000490348 HBG1P69891 147 aa10.73□□□□□ -0.69
SRGAP3-208ENST00000490348 HBG2P69892 147 aa10.73□□□□□ -0.69
SRGAP3-208ENST00000490348 GBGT1Q8N5D6 347 aa10.73□□□□□ -0.69
SRGAP3-208ENST00000490348 TMEM147Q9BVK8 224 aa10.73□□□□□ -0.69
SRGAP3-208ENST00000490348 UQCC1Q9NVA1 299 aa10.73□□□□□ -0.69
SRGAP3-208ENST00000490348 SLC45A2Q9UMX9 530 aa10.73□□□□□ -0.69
SRGAP3-208ENST00000490348 WDR83OSQ9Y284 106 aa10.73□□□□□ -0.69
SRGAP3-208ENST00000490348 UBE2L5PA0A1B0GUS4 154 aa10.73□□□□□ -0.69
SRGAP3-208ENST00000490348 AGPAT2O15120 278 aa10.73□□□□□ -0.69
SRGAP3-208ENST00000490348 GIPP09681 153 aaPredicted RBP10.73□□□□□ -0.69
SRGAP3-208ENST00000490348 BMI1P35226 326 aa10.73□□□□□ -0.69
SRGAP3-208ENST00000490348 DEFB125Q8N687 156 aa10.73□□□□□ -0.69
SRGAP3-208ENST00000490348 BPIFCQ8NFQ6 507 aa10.73□□□□□ -0.69
SRGAP3-208ENST00000490348 OR5C1Q8NGR4 320 aa10.73□□□□□ -0.69
SRGAP3-208ENST00000490348 CHAC2Q8WUX2 184 aa10.73□□□□□ -0.69
SRGAP3-208ENST00000490348 SLC25A31Q9H0C2 315 aa10.73□□□□□ -0.69
SRGAP3-208ENST00000490348 MS4A6AQ9H2W1 248 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms