RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 ETV6P41212 452 aa5.77□□□□□ -1.49
USP39-216ENST00000490193 TSPAN5P62079 268 aa5.77□□□□□ -1.49
USP39-216ENST00000490193 CTAG1AP78358 180 aa5.77□□□□□ -1.49
USP39-216ENST00000490193 DHODHQ02127 395 aa5.77□□□□□ -1.49
USP39-216ENST00000490193 ZNF79Q15937 498 aa5.77□□□□□ -1.49
USP39-216ENST00000490193 TMEM69Q5SWH9 247 aa5.77□□□□□ -1.49
USP39-216ENST00000490193 SPATA31B1PQ5VZV4 182 aa5.77□□□□□ -1.49
USP39-216ENST00000490193 PRSS54Q6PEW0 395 aa5.77□□□□□ -1.49
USP39-216ENST00000490193 IZUMO2Q6UXV1 221 aa5.77□□□□□ -1.49
USP39-216ENST00000490193 FOXI2Q6ZQN5 318 aa5.77□□□□□ -1.49
USP39-216ENST00000490193 CROCCP3Q8IVE0 287 aa5.77□□□□□ -1.49
USP39-216ENST00000490193 ZNRF2Q8NHG8 242 aa5.77□□□□□ -1.49
USP39-216ENST00000490193 SUN5Q8TC36 379 aa5.77□□□□□ -1.49
USP39-216ENST00000490193 GPX8Q8TED1 209 aa5.77□□□□□ -1.49
USP39-216ENST00000490193 ZNF486Q96H40 463 aaPredicted RBP5.77□□□□□ -1.49
USP39-216ENST00000490193 PDCD10Q9BUL8 212 aa5.77□□□□□ -1.49
USP39-216ENST00000490193 VCX3BQ9H321 246 aa5.77□□□□□ -1.49
USP39-216ENST00000490193 SAV1Q9H4B6 383 aaPredicted RBP5.77□□□□□ -1.49
USP39-216ENST00000490193 YTHDF2Q9Y5A9 579 aaKnown RBP5.77□□□□□ -1.49
USP39-216ENST00000490193 DMBT1Q9UGM3 2413 aaPredicted RBP5.77□□□□□ -1.49
USP39-216ENST00000490193 IGHV3OR16-12A0A075B7B8 117 aa5.76□□□□□ -1.49
USP39-216ENST00000490193 LOC102723971A0A1B0GUV8 181 aa5.76□□□□□ -1.49
USP39-216ENST00000490193 A8MTW9 85 aa5.76□□□□□ -1.49
USP39-216ENST00000490193 HBE1P02100 147 aa5.76□□□□□ -1.49
USP39-216ENST00000490193 IL4P05112 153 aa5.76□□□□□ -1.49
USP39-216ENST00000490193 HTN3P15516 51 aa5.76□□□□□ -1.49
USP39-216ENST00000490193 OR10J1P30954 320 aa5.76□□□□□ -1.49
USP39-216ENST00000490193 NUP62P37198 522 aaPredicted RBP5.76□□□□□ -1.49
USP39-216ENST00000490193 HTR2BP41595 481 aa5.76□□□□□ -1.49
USP39-216ENST00000490193 PSMB3P49720 205 aa5.76□□□□□ -1.49
USP39-216ENST00000490193 RND2P52198 227 aa5.76□□□□□ -1.49
USP39-216ENST00000490193 AKR1C2P52895 323 aa5.76□□□□□ -1.49
USP39-216ENST00000490193 PAX9P55771 341 aa5.76□□□□□ -1.49
USP39-216ENST00000490193 DAD1P61803 113 aa5.76□□□□□ -1.49
USP39-216ENST00000490193 C2orf83Q53S99 150 aa5.76□□□□□ -1.49
USP39-216ENST00000490193 C1orf158Q8N1D5 194 aa5.76□□□□□ -1.49
USP39-216ENST00000490193 OR52E5Q8NH55 327 aa5.76□□□□□ -1.49
USP39-216ENST00000490193 RNASEH2CQ8TDP1 164 aaKnown RBP5.76□□□□□ -1.49
USP39-216ENST00000490193 TP53RKQ96S44 253 aa5.76□□□□□ -1.49
USP39-216ENST00000490193 SCPEP1Q9HB40 452 aa5.76□□□□□ -1.49
USP39-216ENST00000490193 ENY2Q9NPA8 101 aa5.76□□□□□ -1.49
USP39-216ENST00000490193 RAB26Q9ULW5 256 aa5.76□□□□□ -1.49
USP39-216ENST00000490193 GOLT1BQ9Y3E0 138 aa5.76□□□□□ -1.49
USP39-216ENST00000490193 A0A0G2JRQ6 117 aa5.75□□□□□ -1.49
USP39-216ENST00000490193 LOC100506127A0A0U1RQW1 187 aa5.75□□□□□ -1.49
USP39-216ENST00000490193 SOCS3O14543 225 aa5.75□□□□□ -1.49
USP39-216ENST00000490193 TOMM40O96008 361 aa5.75□□□□□ -1.49
USP39-216ENST00000490193 IGKV3-20P01619 116 aa5.75□□□□□ -1.49
USP39-216ENST00000490193 RCVRNP35243 200 aa5.75□□□□□ -1.49
USP39-216ENST00000490193 FXYD7P58549 80 aa5.75□□□□□ -1.49
USP39-216ENST00000490193 SPCS3P61009 180 aa5.75□□□□□ -1.49
USP39-216ENST00000490193 RRN3P1Q2M238 152 aa5.75□□□□□ -1.49
USP39-216ENST00000490193 GSG1LQ6UXU4 331 aa5.75□□□□□ -1.49
USP39-216ENST00000490193 LHFPL1Q86WI0 220 aa5.75□□□□□ -1.49
USP39-216ENST00000490193 SAMD12Q8N8I0 201 aa5.75□□□□□ -1.49
USP39-216ENST00000490193 ATG101Q9BSB4 218 aa5.75□□□□□ -1.49
USP39-216ENST00000490193 SLC35B3Q9H1N7 401 aa5.75□□□□□ -1.49
USP39-216ENST00000490193 C3orf85A0A1B0GTC6 90 aa5.74□□□□□ -1.49
USP39-216ENST00000490193 LYRM9A8MSI8 78 aa5.74□□□□□ -1.49
USP39-216ENST00000490193 NXPH3O95157 252 aa5.74□□□□□ -1.49
USP39-216ENST00000490193 RD3LP0DJH9 198 aa5.74□□□□□ -1.49
USP39-216ENST00000490193 UCP1P25874 307 aa5.74□□□□□ -1.49
USP39-216ENST00000490193 ID1P41134 155 aa5.74□□□□□ -1.49
USP39-216ENST00000490193 RORCP51449 518 aa5.74□□□□□ -1.49
USP39-216ENST00000490193 PIGPP57054 158 aa5.74□□□□□ -1.49
USP39-216ENST00000490193 DEFB1P60022 68 aa5.74□□□□□ -1.49
USP39-216ENST00000490193 PSG9Q00887 426 aa5.74□□□□□ -1.49
USP39-216ENST00000490193 OR8G2PQ6IF36 304 aa5.74□□□□□ -1.49
USP39-216ENST00000490193 ETFRF1Q6IPR1 90 aa5.74□□□□□ -1.49
USP39-216ENST00000490193 MZT2AQ6P582 158 aa5.74□□□□□ -1.49
USP39-216ENST00000490193 SPATA12Q7Z6I5 190 aa5.74□□□□□ -1.49
USP39-216ENST00000490193 FAM219AQ8IW50 185 aa5.74□□□□□ -1.49
USP39-216ENST00000490193 SLC24A4Q8NFF2 622 aa5.74□□□□□ -1.49
USP39-216ENST00000490193 TMEM170AQ8WVE7 144 aa5.74□□□□□ -1.49
USP39-216ENST00000490193 RRNAD1Q96FB5 475 aaKnown RBP5.74□□□□□ -1.49
USP39-216ENST00000490193 WDR12Q9GZL7 423 aaKnown RBP5.74□□□□□ -1.49
USP39-216ENST00000490193 KLK11Q9UBX7 282 aa5.74□□□□□ -1.49
USP39-216ENST00000490193 PFDN2Q9UHV9 154 aa5.74□□□□□ -1.49
USP39-216ENST00000490193 A0A0J9YX75 114 aa5.73□□□□□ -1.49
USP39-216ENST00000490193 ISLRO14498 428 aa5.73□□□□□ -1.49
USP39-216ENST00000490193 PSG1P11464 419 aa5.73□□□□□ -1.49
USP39-216ENST00000490193 PGAM2P15259 253 aa5.73□□□□□ -1.49
USP39-216ENST00000490193 PI3P19957 117 aa5.73□□□□□ -1.49
USP39-216ENST00000490193 TSPOP30536 169 aa5.73□□□□□ -1.49
USP39-216ENST00000490193 CCL18P55774 89 aa5.73□□□□□ -1.49
USP39-216ENST00000490193 TRIM16LQ309B1 348 aa5.73□□□□□ -1.49
USP39-216ENST00000490193 C1orf194Q5T5A4 169 aa5.73□□□□□ -1.49
USP39-216ENST00000490193 FAM78BQ5VT40 261 aa5.73□□□□□ -1.49
USP39-216ENST00000490193 SAMD13Q5VXD3 122 aa5.73□□□□□ -1.49
USP39-216ENST00000490193 AMTNQ6UX39 209 aa5.73□□□□□ -1.49
USP39-216ENST00000490193 ARRDC1Q8N5I2 433 aa5.73□□□□□ -1.49
USP39-216ENST00000490193 OR4B1Q8NGF8 309 aa5.73□□□□□ -1.49
USP39-216ENST00000490193 OR51G1Q8NGK1 321 aa5.73□□□□□ -1.49
USP39-216ENST00000490193 COQ8AQ8NI60 647 aa5.73□□□□□ -1.49
USP39-216ENST00000490193 NPIPB3Q92617 1050 aa5.73□□□□□ -1.49
USP39-216ENST00000490193 RNF125Q96EQ8 232 aa5.73□□□□□ -1.49
USP39-216ENST00000490193 IGF2BP2-AS1Q96M15 143 aa5.73□□□□□ -1.49
USP39-216ENST00000490193 C7orf50Q9BRJ6 194 aaKnown RBP5.73□□□□□ -1.49
USP39-216ENST00000490193 HEYLQ9NQ87 328 aaPredicted RBP5.73□□□□□ -1.49
USP39-216ENST00000490193 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms