RNA–Protein interactions for RNA: ENST00000489944.1

SEMA6C-208, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-208ENST00000489944 OR11H2Q8NH07 326 aa8.71□□□□□ -1.02
SEMA6C-208ENST00000489944 OR1S1Q8NH92 325 aa8.71□□□□□ -1.02
SEMA6C-208ENST00000489944 LINC00476Q8WZB0 136 aa8.71□□□□□ -1.02
SEMA6C-208ENST00000489944 SLC35E1Q96K37 410 aa8.71□□□□□ -1.02
SEMA6C-208ENST00000489944 NRN1Q9NPD7 142 aa8.71□□□□□ -1.02
SEMA6C-208ENST00000489944 SLC45A2Q9UMX9 530 aa8.71□□□□□ -1.02
SEMA6C-208ENST00000489944 C11orf94C9JXX5 98 aa8.7□□□□□ -1.02
SEMA6C-208ENST00000489944 IL4P05112 153 aa8.7□□□□□ -1.02
SEMA6C-208ENST00000489944 DHRS2Q13268 280 aa8.7□□□□□ -1.02
SEMA6C-208ENST00000489944 CCDC190Q86UF4 302 aa8.7□□□□□ -1.02
SEMA6C-208ENST00000489944 CENPSQ8N2Z9 138 aa8.7□□□□□ -1.02
SEMA6C-208ENST00000489944 C11orf45Q8TAV5 145 aa8.7□□□□□ -1.02
SEMA6C-208ENST00000489944 TMEM170AQ8WVE7 144 aa8.7□□□□□ -1.02
SEMA6C-208ENST00000489944 CLUHP3Q96NS8 147 aa8.7□□□□□ -1.02
SEMA6C-208ENST00000489944 RBKSQ9H477 322 aa8.7□□□□□ -1.02
SEMA6C-208ENST00000489944 V9GYH0 126 aa8.7□□□□□ -1.02
SEMA6C-208ENST00000489944 SNRPGP15A8MWD9 76 aa8.69□□□□□ -1.02
SEMA6C-208ENST00000489944 SFT2D2O95562 160 aa8.69□□□□□ -1.02
SEMA6C-208ENST00000489944 NKX2-1P43699 371 aaPredicted RBP8.69□□□□□ -1.02
SEMA6C-208ENST00000489944 GGNBP1Q5YKI7 109 aa8.69□□□□□ -1.02
SEMA6C-208ENST00000489944 SIGLEC15Q6ZMC9 328 aa8.69□□□□□ -1.02
SEMA6C-208ENST00000489944 S100A7AQ86SG5 101 aa8.69□□□□□ -1.02
SEMA6C-208ENST00000489944 PHLDA1Q8WV24 401 aaPredicted RBP8.69□□□□□ -1.02
SEMA6C-208ENST00000489944 RNF125Q96EQ8 232 aa8.69□□□□□ -1.02
SEMA6C-208ENST00000489944 ACY3Q96HD9 319 aa8.69□□□□□ -1.02
SEMA6C-208ENST00000489944 TRGV9Q99603 122 aa8.69□□□□□ -1.02
SEMA6C-208ENST00000489944 C7orf50Q9BRJ6 194 aaKnown RBP8.69□□□□□ -1.02
SEMA6C-208ENST00000489944 RNF24Q9Y225 148 aa8.69□□□□□ -1.02
SEMA6C-208ENST00000489944 IGHV3-66A0A0C4DH42 116 aa8.68□□□□□ -1.02
SEMA6C-208ENST00000489944 CCDC160A6NGH7 325 aa8.68□□□□□ -1.02
SEMA6C-208ENST00000489944 ZFP92A6NM28 416 aa8.68□□□□□ -1.02
SEMA6C-208ENST00000489944 ZNF705EA8MWA4 302 aaPredicted RBP8.68□□□□□ -1.02
SEMA6C-208ENST00000489944 ZNF688P0C7X2 276 aa8.68□□□□□ -1.02
SEMA6C-208ENST00000489944 PSG1P11464 419 aa8.68□□□□□ -1.02
SEMA6C-208ENST00000489944 VAMP1P23763 118 aa8.68□□□□□ -1.02
SEMA6C-208ENST00000489944 ID1P41134 155 aa8.68□□□□□ -1.02
SEMA6C-208ENST00000489944 MEOX2P50222 304 aa8.68□□□□□ -1.02
SEMA6C-208ENST00000489944 GAMTQ14353 236 aa8.68□□□□□ -1.02
SEMA6C-208ENST00000489944 USF2Q15853 346 aaPredicted RBP8.68□□□□□ -1.02
SEMA6C-208ENST00000489944 ZNF79Q15937 498 aa8.68□□□□□ -1.02
SEMA6C-208ENST00000489944 LEMD1Q68G75 181 aa8.68□□□□□ -1.02
SEMA6C-208ENST00000489944 LGALS9CQ6DKI2 356 aa8.68□□□□□ -1.02
SEMA6C-208ENST00000489944 TMED4Q7Z7H5 227 aa8.68□□□□□ -1.02
SEMA6C-208ENST00000489944 CENPXA8MT69 81 aa8.67□□□□□ -1.02
SEMA6C-208ENST00000489944 SYNGR2O43760 224 aa8.67□□□□□ -1.02
SEMA6C-208ENST00000489944 INPP1P49441 399 aa8.67□□□□□ -1.02
SEMA6C-208ENST00000489944 PMS2P11Q13670 270 aa8.67□□□□□ -1.02
SEMA6C-208ENST00000489944 ZNF124Q15973 351 aa8.67□□□□□ -1.02
SEMA6C-208ENST00000489944 THAP8Q8NA92 274 aa8.67□□□□□ -1.02
SEMA6C-208ENST00000489944 GPR82Q96P67 336 aa8.67□□□□□ -1.02
SEMA6C-208ENST00000489944 RAB40CQ96S21 281 aa8.67□□□□□ -1.02
SEMA6C-208ENST00000489944 RBM38Q9H0Z9 239 aaKnown RBP8.67□□□□□ -1.02
SEMA6C-208ENST00000489944 SMIM9A6NGZ8 99 aa8.66□□□□□ -1.02
SEMA6C-208ENST00000489944 NDUFB6O95139 128 aa8.66□□□□□ -1.02
SEMA6C-208ENST00000489944 NXPH3O95157 252 aa8.66□□□□□ -1.02
SEMA6C-208ENST00000489944 IFNA21P01568 189 aa8.66□□□□□ -1.02
SEMA6C-208ENST00000489944 PSMB3P49720 205 aa8.66□□□□□ -1.02
SEMA6C-208ENST00000489944 ACTL10Q5JWF8 245 aa8.66□□□□□ -1.02
SEMA6C-208ENST00000489944 FAM24BQ8N5W8 94 aa8.66□□□□□ -1.02
SEMA6C-208ENST00000489944 Q8NAQ8 132 aa8.66□□□□□ -1.02
SEMA6C-208ENST00000489944 OR4D5Q8NGN0 318 aa8.66□□□□□ -1.02
SEMA6C-208ENST00000489944 COQ8AQ8NI60 647 aa8.66□□□□□ -1.02
SEMA6C-208ENST00000489944 C2CD4CQ8TF44 421 aa8.66□□□□□ -1.02
SEMA6C-208ENST00000489944 NDUFA13Q9P0J0 144 aa8.66□□□□□ -1.02
SEMA6C-208ENST00000489944 PLECQ15149 4684 aaKnown RBP8.65□□□□□ -1.02
SEMA6C-208ENST00000489944 TEX48A0A1B0GUV7 120 aa8.65□□□□□ -1.02
SEMA6C-208ENST00000489944 TMEM189A5PLL7 270 aa8.65□□□□□ -1.02
SEMA6C-208ENST00000489944 FNDC10F2Z333 226 aa8.65□□□□□ -1.02
SEMA6C-208ENST00000489944 ISLRO14498 428 aa8.65□□□□□ -1.02
SEMA6C-208ENST00000489944 LY6G6CO95867 125 aa8.65□□□□□ -1.02
SEMA6C-208ENST00000489944 HLA-DRB4P13762 266 aa8.65□□□□□ -1.02
SEMA6C-208ENST00000489944 EWSR1Q01844 656 aaKnown RBP eCLIP8.65□□□□□ -1.02
SEMA6C-208ENST00000489944 ID3Q02535 119 aa8.65□□□□□ -1.02
SEMA6C-208ENST00000489944 PPP1R1AQ13522 171 aa8.65□□□□□ -1.02
SEMA6C-208ENST00000489944 PSMG4Q5JS54 123 aa8.65□□□□□ -1.02
SEMA6C-208ENST00000489944 TRIQKQ629K1 86 aa8.65□□□□□ -1.02
SEMA6C-208ENST00000489944 NEU1Q99519 415 aa8.65□□□□□ -1.02
SEMA6C-208ENST00000489944 SRRQ9GZT4 340 aa8.65□□□□□ -1.02
SEMA6C-208ENST00000489944 TBC1D24Q9ULP9 559 aa8.65□□□□□ -1.02
SEMA6C-208ENST00000489944 HLA-DRB4X5D2U9 266 aa8.65□□□□□ -1.02
SEMA6C-208ENST00000489944 ALMS1Q8TCU4 4167 aa8.65□□□□□ -1.02
SEMA6C-208ENST00000489944 IGKV1D-37A0A075B6S9 117 aa8.64□□□□□ -1.03
SEMA6C-208ENST00000489944 H3BMM0 161 aa8.64□□□□□ -1.03
SEMA6C-208ENST00000489944 GIG44P09565 113 aaPredicted RBP8.64□□□□□ -1.03
SEMA6C-208ENST00000489944 SELENOTP62341 195 aa8.64□□□□□ -1.03
SEMA6C-208ENST00000489944 FOXI2Q6ZQN5 318 aa8.64□□□□□ -1.03
SEMA6C-208ENST00000489944 CSNK1G2-AS1Q8NCQ2 148 aa8.64□□□□□ -1.03
SEMA6C-208ENST00000489944 BPIFCQ8NFQ6 507 aa8.64□□□□□ -1.03
SEMA6C-208ENST00000489944 PRR13Q9NZ81 148 aa8.64□□□□□ -1.03
SEMA6C-208ENST00000489944 STRAPQ9Y3F4 350 aaKnown RBP8.64□□□□□ -1.03
SEMA6C-208ENST00000489944 C9orf170A2RU37 121 aa8.63□□□□□ -1.03
SEMA6C-208ENST00000489944 PRSS46E5RG02 174 aa8.63□□□□□ -1.03
SEMA6C-208ENST00000489944 GALR1P47211 349 aa8.63□□□□□ -1.03
SEMA6C-208ENST00000489944 PAX9P55771 341 aa8.63□□□□□ -1.03
SEMA6C-208ENST00000489944 TAS2R30P59541 319 aa8.63□□□□□ -1.03
SEMA6C-208ENST00000489944 LINC00299Q6ZSB3 139 aa8.63□□□□□ -1.03
SEMA6C-208ENST00000489944 TMEM144Q7Z5S9 345 aa8.63□□□□□ -1.03
SEMA6C-208ENST00000489944 OR8I2Q8N0Y5 310 aa8.63□□□□□ -1.03
SEMA6C-208ENST00000489944 PBDC1Q9BVG4 233 aa8.63□□□□□ -1.03
SEMA6C-208ENST00000489944 TRAV10A0A0B4J240 114 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms