RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 SSMEM1Q8WWF3 244 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 RLN3Q8WXF3 142 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 GFRA4Q9GZZ7 299 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 MBNL3Q9NUK0 354 aaKnown RBP3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 Q9UFV3 132 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 IGLV3-32A0A0A0MS00 114 aa3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 TRAV24A0A0B4J272 114 aa3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 KIR2DS5A0A0G2JLQ3 304 aa3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 A0A0G2JNG1 304 aa3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 C5orf49A4QMS7 147 aa3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 TMEM8BA6NDV4 472 aa3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 ZNF785A8K8V0 405 aa3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 FABP5P3A8MUU1 101 aa3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 GGTLC3B5MD39 225 aa3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 FNDC10F2Z333 226 aa3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 KIR2DS3K7RE56 304 aa3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 RHODO00212 210 aa3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 HSPB6O14558 160 aa3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 CHEK1O14757 476 aa3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 PAX4O43316 350 aa3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 RNASE1P07998 156 aaKnown RBP3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 SRD5A1P18405 259 aa3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 ZNF138P52744 262 aa3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 PPP1CAP62136 330 aa3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 GNG3P63215 75 aa3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 KIR2DS5Q14953 304 aa3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 Q6P435 159 aa3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 RBPMS2Q6ZRY4 209 aaKnown RBP3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 PLXDC1Q8IUK5 500 aa3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 PCP2Q8IVA1 136 aa3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 CEND1Q8N111 149 aa3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 OSR1Q8TAX0 266 aaPredicted RBP3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 DLL3Q9NYJ7 618 aa3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 MRPS17Q9Y2R5 130 aaKnown RBP3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 AMMECR1Q9Y4X0 333 aaPredicted RBP3.86□□□□□ -1.79
SNRNP40-206ENST00000489853 CENPVL3A0A0U1RRI6 287 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 C17orf98A8MV24 154 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 SHISA9B4DS77 424 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 NPIPB6E9PJ23 425 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 APOHP02749 345 aaPredicted RBP3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 CFHR2P36980 270 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 BRWD1-AS2P59051 145 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 RPL30P62888 115 aaKnown RBP3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 RRN3P1Q2M238 152 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 C12orf74Q32Q52 190 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 C5orf47Q569G3 176 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 C19orf54Q5BKX5 351 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 SPINK9Q5DT21 86 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 ABHD12Q8N2K0 398 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 TMEM178AQ8NBL3 297 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 TMEM116Q8NCL8 245 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 PRSS3P2Q8NHM4 247 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 Q8TCH9 128 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 RNF138Q8WVD3 245 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 PPDPFLQ8WWR9 84 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 ZNF503Q96F45 646 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 COQ2Q96H96 371 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 CITED2Q99967 270 aaPredicted RBP3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 PRSS22Q9GZN4 317 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 CHRNA10Q9GZZ6 450 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 RPP21Q9H633 154 aaKnown RBP3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 NHP2Q9NX24 153 aaKnown RBP3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 VPREB3Q9UKI3 123 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 ESPL1Q14674 2120 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 A0A087WWL8 130 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 K7ERJ3 54 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 DNPH1O43598 174 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 ACTL6BO94805 426 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 SLC25A5P05141 298 aaKnown RBP3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 GRPP07492 148 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 C8orf88P0DMB2 117 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 HLA-DRB4P13762 266 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 MPV17P39210 176 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 ID1P41134 155 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 NMUP48645 174 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 NDUFV3P56181 108 aaKnown RBP3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 TCTAP57738 103 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 PCBD1P61457 104 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 PLP2Q04941 152 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 SRYQ05066 204 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 GAGE2BQ13066 116 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 GAGE2EQ4V326 116 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 CFAP126Q5VTH2 177 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 Q6Q795 121 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 ZNF497Q6ZNH5 498 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 OR8A1Q8NGG7 326 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 PATE1Q8WXA2 126 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 PGLYRP4Q96LB8 373 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 HSD17B10Q99714 261 aaKnown RBP3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 NABP2Q9BQ15 211 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 CHAC1Q9BUX1 264 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 TMEM126AQ9H061 195 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 MAP1LC3AQ9H492 121 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 ZNF492Q9P255 531 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 GAGE2DQ9UEU5 116 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 F11RQ9Y624 299 aaKnown RBP3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 HLA-DRB4X5D2U9 266 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 MUC6Q6W4X9 2439 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 RP1P56715 2156 aa3.85□□□□□ -1.79
SNRNP40-206ENST00000489853 ARHGEF17Q96PE2 2063 aaPredicted RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms