RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 USF2Q15853 346 aaPredicted RBP13.15□□□□□ -0.3
ABCF3-217ENST00000489719 C4orf46Q504U0 113 aa13.15□□□□□ -0.3
ABCF3-217ENST00000489719 STHQ8IWL8 128 aa13.15□□□□□ -0.3
ABCF3-217ENST00000489719 SNRPGP15A8MWD9 76 aa13.14□□□□□ -0.31
ABCF3-217ENST00000489719 DHRS2Q13268 280 aa13.14□□□□□ -0.31
ABCF3-217ENST00000489719 SPANXN5Q5MJ07 72 aa13.14□□□□□ -0.31
ABCF3-217ENST00000489719 LYG2Q86SG7 212 aa13.14□□□□□ -0.31
ABCF3-217ENST00000489719 FAM24BQ8N5W8 94 aa13.14□□□□□ -0.31
ABCF3-217ENST00000489719 PBDC1Q9BVG4 233 aa13.14□□□□□ -0.31
ABCF3-217ENST00000489719 A0A0J9YWU9 116 aa13.13□□□□□ -0.31
ABCF3-217ENST00000489719 ADAP1O75689 374 aa13.13□□□□□ -0.31
ABCF3-217ENST00000489719 ANXA7P20073 488 aaKnown RBP13.13□□□□□ -0.31
ABCF3-217ENST00000489719 NUP62P37198 522 aaPredicted RBP13.13□□□□□ -0.31
ABCF3-217ENST00000489719 ID3Q02535 119 aa13.13□□□□□ -0.31
ABCF3-217ENST00000489719 GLMPQ8WWB7 406 aa13.13□□□□□ -0.31
ABCF3-217ENST00000489719 RNF125Q96EQ8 232 aa13.13□□□□□ -0.31
ABCF3-217ENST00000489719 STRAPQ9Y3F4 350 aaKnown RBP13.13□□□□□ -0.31
ABCF3-217ENST00000489719 BUB3O43684 328 aa13.12□□□□□ -0.31
ABCF3-217ENST00000489719 ZNF688P0C7X2 276 aa13.12□□□□□ -0.31
ABCF3-217ENST00000489719 ZNF90Q03938 601 aa13.12□□□□□ -0.31
ABCF3-217ENST00000489719 GATAD1Q8WUU5 269 aa13.12□□□□□ -0.31
ABCF3-217ENST00000489719 BTCP35070 178 aa13.11□□□□□ -0.31
ABCF3-217ENST00000489719 NKX2-1P43699 371 aaPredicted RBP13.11□□□□□ -0.31
ABCF3-217ENST00000489719 OR2F1Q13607 317 aa13.11□□□□□ -0.31
ABCF3-217ENST00000489719 OR8G2PQ6IF36 304 aa13.11□□□□□ -0.31
ABCF3-217ENST00000489719 SIGLEC15Q6ZMC9 328 aa13.11□□□□□ -0.31
ABCF3-217ENST00000489719 TMEM217Q8N7C4 229 aa13.11□□□□□ -0.31
ABCF3-217ENST00000489719 DCANP1Q8TF63 244 aa13.11□□□□□ -0.31
ABCF3-217ENST00000489719 TRGV9Q99603 122 aa13.11□□□□□ -0.31
ABCF3-217ENST00000489719 RARRES2Q99969 163 aa13.11□□□□□ -0.31
ABCF3-217ENST00000489719 IGKV1D-37A0A075B6S9 117 aa13.1□□□□□ -0.31
ABCF3-217ENST00000489719 LCE6AA0A183 80 aa13.1□□□□□ -0.31
ABCF3-217ENST00000489719 PLA2G10O15496 165 aa13.1□□□□□ -0.31
ABCF3-217ENST00000489719 LYRM1O43325 122 aa13.1□□□□□ -0.31
ABCF3-217ENST00000489719 CA1P00915 261 aaPredicted RBP13.1□□□□□ -0.31
ABCF3-217ENST00000489719 LYZP61626 148 aa13.1□□□□□ -0.31
ABCF3-217ENST00000489719 SNRPD3P62318 126 aaKnown RBP13.1□□□□□ -0.31
ABCF3-217ENST00000489719 POLR2GP62487 172 aaKnown RBP eCLIP13.1□□□□□ -0.31
ABCF3-217ENST00000489719 PPP1R14BQ96C90 147 aa13.1□□□□□ -0.31
ABCF3-217ENST00000489719 PSENENQ9NZ42 101 aa13.1□□□□□ -0.31
ABCF3-217ENST00000489719 KNCNA6PVL3 124 aa13.09□□□□□ -0.31
ABCF3-217ENST00000489719 H3BP45 60 aa13.09□□□□□ -0.31
ABCF3-217ENST00000489719 CFDP00746 253 aaPredicted RBP13.09□□□□□ -0.31
ABCF3-217ENST00000489719 PSMG4Q5JS54 123 aa13.09□□□□□ -0.31
ABCF3-217ENST00000489719 THAP8Q8NA92 274 aa13.09□□□□□ -0.31
ABCF3-217ENST00000489719 OR11H2Q8NH07 326 aa13.09□□□□□ -0.31
ABCF3-217ENST00000489719 SEPSECSQ9HD40 501 aaKnown RBP13.09□□□□□ -0.31
ABCF3-217ENST00000489719 NRN1Q9NPD7 142 aa13.09□□□□□ -0.31
ABCF3-217ENST00000489719 GSKIPQ9P0R6 139 aa13.09□□□□□ -0.31
ABCF3-217ENST00000489719 CXorf65A6NEN9 183 aa13.08□□□□□ -0.32
ABCF3-217ENST00000489719 IAH1Q2TAA2 248 aaPredicted RBP13.08□□□□□ -0.32
ABCF3-217ENST00000489719 ACTL10Q5JWF8 245 aa13.08□□□□□ -0.32
ABCF3-217ENST00000489719 C1orf194Q5T5A4 169 aa13.08□□□□□ -0.32
ABCF3-217ENST00000489719 OR4D5Q8NGN0 318 aa13.08□□□□□ -0.32
ABCF3-217ENST00000489719 MITD1Q8WV92 249 aa13.08□□□□□ -0.32
ABCF3-217ENST00000489719 SMIM8Q96KF7 97 aa13.08□□□□□ -0.32
ABCF3-217ENST00000489719 RAB40CQ96S21 281 aa13.08□□□□□ -0.32
ABCF3-217ENST00000489719 C20orf85Q9H1P6 137 aa13.08□□□□□ -0.32
ABCF3-217ENST00000489719 FBXL17Q9UF56 701 aa13.08□□□□□ -0.32
ABCF3-217ENST00000489719 RYR3Q15413 4870 aa13.08□□□□□ -0.32
ABCF3-217ENST00000489719 SSSCA1O60232 199 aa13.07□□□□□ -0.32
ABCF3-217ENST00000489719 JTBO76095 146 aa13.07□□□□□ -0.32
ABCF3-217ENST00000489719 TCRBP04435 133 aa13.07□□□□□ -0.32
ABCF3-217ENST00000489719 ATF4P18848 351 aaPredicted RBP13.07□□□□□ -0.32
ABCF3-217ENST00000489719 AKR1C1Q04828 323 aa13.07□□□□□ -0.32
ABCF3-217ENST00000489719 PMS2P11Q13670 270 aa13.07□□□□□ -0.32
ABCF3-217ENST00000489719 TMEM41BQ5BJD5 291 aa13.07□□□□□ -0.32
ABCF3-217ENST00000489719 MORN3Q6PF18 240 aaPredicted RBP13.07□□□□□ -0.32
ABCF3-217ENST00000489719 CCDC32Q9BV29 185 aa13.07□□□□□ -0.32
ABCF3-217ENST00000489719 IGKV1OR2-108A0A075B7D4 117 aa13.06□□□□□ -0.32
ABCF3-217ENST00000489719 SCGB1D2O95969 90 aa13.06□□□□□ -0.32
ABCF3-217ENST00000489719 SPP1P10451 314 aa13.06□□□□□ -0.32
ABCF3-217ENST00000489719 S100A7P31151 101 aa13.06□□□□□ -0.32
ABCF3-217ENST00000489719 LINC00299Q6ZSB3 139 aa13.06□□□□□ -0.32
ABCF3-217ENST00000489719 TRPT1Q86TN4 253 aaKnown RBP13.06□□□□□ -0.32
ABCF3-217ENST00000489719 OR8I2Q8N0Y5 310 aa13.06□□□□□ -0.32
ABCF3-217ENST00000489719 BPIFCQ8NFQ6 507 aa13.06□□□□□ -0.32
ABCF3-217ENST00000489719 TENM2Q9NT68 2774 aa13.06□□□□□ -0.32
ABCF3-217ENST00000489719 TRAV6A0A075B6T7 132 aa13.05□□□□□ -0.32
ABCF3-217ENST00000489719 SMCO3A2RU48 225 aa13.05□□□□□ -0.32
ABCF3-217ENST00000489719 PRSS46E5RG02 174 aa13.05□□□□□ -0.32
ABCF3-217ENST00000489719 ID1P41134 155 aa13.05□□□□□ -0.32
ABCF3-217ENST00000489719 ZNF846Q147U1 533 aa13.05□□□□□ -0.32
ABCF3-217ENST00000489719 ZBTB8BQ8NAP8 495 aaPredicted RBP13.05□□□□□ -0.32
ABCF3-217ENST00000489719 S100ZQ8WXG8 99 aa13.05□□□□□ -0.32
ABCF3-217ENST00000489719 ORM2P19652 201 aa13.04□□□□□ -0.32
ABCF3-217ENST00000489719 EWSR1Q01844 656 aaKnown RBP eCLIP13.04□□□□□ -0.32
ABCF3-217ENST00000489719 MZT2BQ6NZ67 158 aa13.04□□□□□ -0.32
ABCF3-217ENST00000489719 ACOT7LQ6ZUV0 252 aa13.04□□□□□ -0.32
ABCF3-217ENST00000489719 TMEM144Q7Z5S9 345 aa13.04□□□□□ -0.32
ABCF3-217ENST00000489719 LINC00052Q96N35 136 aa13.04□□□□□ -0.32
ABCF3-217ENST00000489719 FAM240BA0A1B0GVZ2 78 aa13.03□□□□□ -0.32
ABCF3-217ENST00000489719 TAS2R30P59541 319 aa13.03□□□□□ -0.32
ABCF3-217ENST00000489719 NUTF2P61970 127 aaKnown RBP13.03□□□□□ -0.32
ABCF3-217ENST00000489719 OR10P1Q8NGE3 313 aa13.03□□□□□ -0.32
ABCF3-217ENST00000489719 TMEM147Q9BVK8 224 aa13.03□□□□□ -0.32
ABCF3-217ENST00000489719 NUDT15Q9NV35 164 aa13.03□□□□□ -0.32
ABCF3-217ENST00000489719 SLC45A2Q9UMX9 530 aa13.03□□□□□ -0.32
ABCF3-217ENST00000489719 NUPR2A6NF83 97 aa13.02□□□□□ -0.33
ABCF3-217ENST00000489719 FAM25EA8MYX2 175 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms