RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 MYCNOSP40205 109 aa9.2□□□□□ -0.94
GGPS1-207ENST00000489692 FGF8P55075 233 aaPredicted RBP9.2□□□□□ -0.94
GGPS1-207ENST00000489692 RAB31Q13636 194 aa9.2□□□□□ -0.94
GGPS1-207ENST00000489692 PLGLAQ15195 96 aa9.2□□□□□ -0.94
GGPS1-207ENST00000489692 LINC00482Q8N8I6 264 aa9.2□□□□□ -0.94
GGPS1-207ENST00000489692 RAB24Q969Q5 203 aa9.2□□□□□ -0.94
GGPS1-207ENST00000489692 FLYWCH2Q96CP2 140 aaKnown RBP9.2□□□□□ -0.94
GGPS1-207ENST00000489692 MGST2Q99735 147 aa9.2□□□□□ -0.94
GGPS1-207ENST00000489692 HSPB9Q9BQS6 159 aa9.2□□□□□ -0.94
GGPS1-207ENST00000489692 MCRIP2Q9BUT9 160 aaKnown RBP9.2□□□□□ -0.94
GGPS1-207ENST00000489692 PUS1Q9Y606 427 aaKnown RBP eCLIP9.2□□□□□ -0.94
GGPS1-207ENST00000489692 CXorf65A6NEN9 183 aa9.19□□□□□ -0.94
GGPS1-207ENST00000489692 YIF1AO95070 293 aa9.19□□□□□ -0.94
GGPS1-207ENST00000489692 RPL29P47914 159 aaKnown RBP9.19□□□□□ -0.94
GGPS1-207ENST00000489692 LGALS7P47929 136 aa9.19□□□□□ -0.94
GGPS1-207ENST00000489692 RPS16P62249 146 aaKnown RBP9.19□□□□□ -0.94
GGPS1-207ENST00000489692 RPL8P62917 257 aaKnown RBP9.19□□□□□ -0.94
GGPS1-207ENST00000489692 MEF2BQ02080 365 aaPredicted RBP9.19□□□□□ -0.94
GGPS1-207ENST00000489692 DEFB136Q30KP8 78 aa9.19□□□□□ -0.94
GGPS1-207ENST00000489692 TEPPQ6URK8 271 aa9.19□□□□□ -0.94
GGPS1-207ENST00000489692 ABHD5Q8WTS1 349 aa9.19□□□□□ -0.94
GGPS1-207ENST00000489692 HIST1H2BAQ96A08 127 aa9.19□□□□□ -0.94
GGPS1-207ENST00000489692 TXNDC17Q9BRA2 123 aa9.19□□□□□ -0.94
GGPS1-207ENST00000489692 NDUFA4L2Q9NRX3 87 aa9.19□□□□□ -0.94
GGPS1-207ENST00000489692 MLXQ9UH92 298 aa9.19□□□□□ -0.94
GGPS1-207ENST00000489692 PXMP4Q9Y6I8 212 aa9.19□□□□□ -0.94
GGPS1-207ENST00000489692 CCL24O00175 119 aa9.18□□□□□ -0.94
GGPS1-207ENST00000489692 NBR2O15453 112 aa9.18□□□□□ -0.94
GGPS1-207ENST00000489692 IGLV2-23P01705 113 aa9.18□□□□□ -0.94
GGPS1-207ENST00000489692 ELANEP08246 267 aa9.18□□□□□ -0.94
GGPS1-207ENST00000489692 RNASE2P10153 161 aaKnown RBP9.18□□□□□ -0.94
GGPS1-207ENST00000489692 FOXE3Q13461 319 aa9.18□□□□□ -0.94
GGPS1-207ENST00000489692 VMA21Q3ZAQ7 101 aa9.18□□□□□ -0.94
GGPS1-207ENST00000489692 AKIRIN2Q53H80 203 aa9.18□□□□□ -0.94
GGPS1-207ENST00000489692 TMEM144Q7Z5S9 345 aa9.18□□□□□ -0.94
GGPS1-207ENST00000489692 YPEL4Q96NS1 127 aa9.18□□□□□ -0.94
GGPS1-207ENST00000489692 C20orf24Q9BUV8 137 aa9.18□□□□□ -0.94
GGPS1-207ENST00000489692 COMMD5Q9GZQ3 224 aa9.18□□□□□ -0.94
GGPS1-207ENST00000489692 NOTCH3Q9UM47 2321 aa9.18□□□□□ -0.94
GGPS1-207ENST00000489692 PRELID1Q9Y255 219 aa9.18□□□□□ -0.94
GGPS1-207ENST00000489692 A0A1W2PPV4 95 aa9.17□□□□□ -0.94
GGPS1-207ENST00000489692 CTRB1P17538 263 aa9.17□□□□□ -0.94
GGPS1-207ENST00000489692 CNTFRP26992 372 aa9.17□□□□□ -0.94
GGPS1-207ENST00000489692 GPX4P36969 197 aaPredicted RBP9.17□□□□□ -0.94
GGPS1-207ENST00000489692 CD81P60033 236 aa9.17□□□□□ -0.94
GGPS1-207ENST00000489692 KRTAP10-11P60412 298 aa9.17□□□□□ -0.94
GGPS1-207ENST00000489692 RAB5BP61020 215 aa9.17□□□□□ -0.94
GGPS1-207ENST00000489692 ERHP84090 104 aaKnown RBP9.17□□□□□ -0.94
GGPS1-207ENST00000489692 CTRB2Q6GPI1 263 aa9.17□□□□□ -0.94
GGPS1-207ENST00000489692 CYP2G1PQ6ZSU1 146 aa9.17□□□□□ -0.94
GGPS1-207ENST00000489692 TEX45Q8NA69 505 aa9.17□□□□□ -0.94
GGPS1-207ENST00000489692 CACNG8Q8WXS5 425 aa9.17□□□□□ -0.94
GGPS1-207ENST00000489692 RAX2Q96IS3 184 aa9.17□□□□□ -0.94
GGPS1-207ENST00000489692 SLC35E1Q96K37 410 aa9.17□□□□□ -0.94
GGPS1-207ENST00000489692 HINT2Q9BX68 163 aa9.17□□□□□ -0.94
GGPS1-207ENST00000489692 SDF2L1Q9HCN8 221 aa9.17□□□□□ -0.94
GGPS1-207ENST00000489692 TMEM242Q9NWH2 141 aa9.17□□□□□ -0.94
GGPS1-207ENST00000489692 NAT8Q9UHE5 227 aa9.17□□□□□ -0.94
GGPS1-207ENST00000489692 PRKDCP78527 4128 aaKnown RBP9.16□□□□□ -0.94
GGPS1-207ENST00000489692 WI2-2373I1.2A0A1W2PRP0 233 aa9.16□□□□□ -0.94
GGPS1-207ENST00000489692 K7EIL1 84 aa9.16□□□□□ -0.94
GGPS1-207ENST00000489692 ATP6V0E1O15342 81 aa9.16□□□□□ -0.94
GGPS1-207ENST00000489692 OR2C1O95371 312 aa9.16□□□□□ -0.94
GGPS1-207ENST00000489692 CXorf1O96002 111 aa9.16□□□□□ -0.94
GGPS1-207ENST00000489692 STAG3L2P0CL84 134 aa9.16□□□□□ -0.94
GGPS1-207ENST00000489692 STAG3L3P0CL85 134 aa9.16□□□□□ -0.94
GGPS1-207ENST00000489692 MYOD1P15172 320 aa9.16□□□□□ -0.94
GGPS1-207ENST00000489692 AKR1C3P42330 323 aa9.16□□□□□ -0.94
GGPS1-207ENST00000489692 RHOBP62745 196 aa9.16□□□□□ -0.94
GGPS1-207ENST00000489692 PRR20EP86478 221 aa9.16□□□□□ -0.94
GGPS1-207ENST00000489692 PRR20CP86479 221 aa9.16□□□□□ -0.94
GGPS1-207ENST00000489692 PRR20DP86480 221 aa9.16□□□□□ -0.94
GGPS1-207ENST00000489692 PRR20BP86481 221 aa9.16□□□□□ -0.94
GGPS1-207ENST00000489692 PRR20AP86496 221 aa9.16□□□□□ -0.94
GGPS1-207ENST00000489692 ECSCRQ19T08 205 aa9.16□□□□□ -0.94
GGPS1-207ENST00000489692 C5orf64Q2M2E5 130 aa9.16□□□□□ -0.94
GGPS1-207ENST00000489692 RNASEH2CQ8TDP1 164 aaKnown RBP9.16□□□□□ -0.94
GGPS1-207ENST00000489692 RITA1Q96K30 269 aa9.16□□□□□ -0.94
GGPS1-207ENST00000489692 OR5B12Q96R08 314 aa9.16□□□□□ -0.94
GGPS1-207ENST00000489692 RNF5Q99942 180 aa9.16□□□□□ -0.94
GGPS1-207ENST00000489692 CTDSP1Q9GZU7 261 aa9.16□□□□□ -0.94
GGPS1-207ENST00000489692 ZMAT5Q9UDW3 170 aaKnown RBP9.16□□□□□ -0.94
GGPS1-207ENST00000489692 SLC45A2Q9UMX9 530 aa9.16□□□□□ -0.94
GGPS1-207ENST00000489692 ARL2-SNX15V9GYD0 113 aa9.16□□□□□ -0.94
GGPS1-207ENST00000489692 TRAV41A0A0B4J266 112 aa9.15□□□□□ -0.94
GGPS1-207ENST00000489692 ZNF727A8MUV8 499 aa9.15□□□□□ -0.94
GGPS1-207ENST00000489692 C1orf196B1AJZ1 125 aa9.15□□□□□ -0.94
GGPS1-207ENST00000489692 F6UZH7 168 aa9.15□□□□□ -0.94
GGPS1-207ENST00000489692 G3V318 75 aa9.15□□□□□ -0.94
GGPS1-207ENST00000489692 PDE6DO43924 150 aa9.15□□□□□ -0.94
GGPS1-207ENST00000489692 HLA-DRB1P01911 266 aa9.15□□□□□ -0.94
GGPS1-207ENST00000489692 IGF1P05019 195 aa9.15□□□□□ -0.94
GGPS1-207ENST00000489692 RAB5AP20339 215 aa9.15□□□□□ -0.94
GGPS1-207ENST00000489692 CDX1P47902 265 aaPredicted RBP9.15□□□□□ -0.94
GGPS1-207ENST00000489692 RND2P52198 227 aa9.15□□□□□ -0.94
GGPS1-207ENST00000489692 CEBPGP53567 150 aa9.15□□□□□ -0.94
GGPS1-207ENST00000489692 SUB1P53999 127 aaKnown RBP eCLIP9.15□□□□□ -0.94
GGPS1-207ENST00000489692 B2MP61769 119 aa9.15□□□□□ -0.94
GGPS1-207ENST00000489692 CD69Q07108 199 aa9.15□□□□□ -0.94
GGPS1-207ENST00000489692 MIC13Q5XKP0 118 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms