RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 MRPL36Q9P0J6 103 aaKnown RBP8.11□□□□□ -1.11
SCAMP4-208ENST00000489554 MPDU1O75352 247 aa8.1□□□□□ -1.11
SCAMP4-208ENST00000489554 IFNA10P01566 189 aa8.1□□□□□ -1.11
SCAMP4-208ENST00000489554 ATP6V0CP27449 155 aa8.1□□□□□ -1.11
SCAMP4-208ENST00000489554 SNCAP37840 140 aa8.1□□□□□ -1.11
SCAMP4-208ENST00000489554 SLURP1P55000 103 aa8.1□□□□□ -1.11
SCAMP4-208ENST00000489554 CD69Q07108 199 aa8.1□□□□□ -1.11
SCAMP4-208ENST00000489554 SLC38A11Q08AI6 406 aa8.1□□□□□ -1.11
SCAMP4-208ENST00000489554 BTNL8Q6UX41 500 aa8.1□□□□□ -1.11
SCAMP4-208ENST00000489554 Q6ZRG5 221 aa8.1□□□□□ -1.11
SCAMP4-208ENST00000489554 ZNF709Q8N972 641 aa8.1□□□□□ -1.11
SCAMP4-208ENST00000489554 ZNF414Q96IQ9 312 aa8.1□□□□□ -1.11
SCAMP4-208ENST00000489554 B9D2Q9BPU9 175 aa8.1□□□□□ -1.11
SCAMP4-208ENST00000489554 HRH4Q9H3N8 390 aa8.1□□□□□ -1.11
SCAMP4-208ENST00000489554 KCNIP2Q9NS61 270 aa8.1□□□□□ -1.11
SCAMP4-208ENST00000489554 ZNF256Q9Y2P7 627 aaPredicted RBP8.1□□□□□ -1.11
SCAMP4-208ENST00000489554 F8W735 103 aaPredicted RBP8.09□□□□□ -1.11
SCAMP4-208ENST00000489554 SAP30O75446 220 aa8.09□□□□□ -1.11
SCAMP4-208ENST00000489554 NDUFB8O95169 186 aa8.09□□□□□ -1.11
SCAMP4-208ENST00000489554 M6PRP20645 277 aa8.09□□□□□ -1.11
SCAMP4-208ENST00000489554 RNASEH2CQ8TDP1 164 aaKnown RBP8.09□□□□□ -1.11
SCAMP4-208ENST00000489554 NARS2Q96I59 477 aaKnown RBP8.09□□□□□ -1.11
SCAMP4-208ENST00000489554 USMG5Q96IX5 58 aa8.09□□□□□ -1.11
SCAMP4-208ENST00000489554 TREM1Q9NP99 234 aa8.09□□□□□ -1.11
SCAMP4-208ENST00000489554 UQCC1Q9NVA1 299 aa8.09□□□□□ -1.11
SCAMP4-208ENST00000489554 TMEM218A2RU14 115 aa8.08□□□□□ -1.12
SCAMP4-208ENST00000489554 FNDC10F2Z333 226 aa8.08□□□□□ -1.12
SCAMP4-208ENST00000489554 OR2J3O76001 311 aa8.08□□□□□ -1.12
SCAMP4-208ENST00000489554 MT-CO2P00403 227 aa8.08□□□□□ -1.12
SCAMP4-208ENST00000489554 H2AFB1P0C5Y9 115 aa8.08□□□□□ -1.12
SCAMP4-208ENST00000489554 TAGLN2P37802 199 aaKnown RBP8.08□□□□□ -1.12
SCAMP4-208ENST00000489554 RHOGP84095 191 aa8.08□□□□□ -1.12
SCAMP4-208ENST00000489554 RAB31Q13636 194 aa8.08□□□□□ -1.12
SCAMP4-208ENST00000489554 VWC2Q2TAL6 325 aa8.08□□□□□ -1.12
SCAMP4-208ENST00000489554 OR8G2PQ6IF36 304 aa8.08□□□□□ -1.12
SCAMP4-208ENST00000489554 ACSM6Q6P461 480 aa8.08□□□□□ -1.12
SCAMP4-208ENST00000489554 TMEM182Q6ZP80 229 aaPredicted RBP8.08□□□□□ -1.12
SCAMP4-208ENST00000489554 SVBPQ8N300 66 aa8.08□□□□□ -1.12
SCAMP4-208ENST00000489554 PRR25Q96S07 402 aa8.08□□□□□ -1.12
SCAMP4-208ENST00000489554 ELOVL1Q9BW60 279 aa8.08□□□□□ -1.12
SCAMP4-208ENST00000489554 SEC11CQ9BY50 192 aa8.08□□□□□ -1.12
SCAMP4-208ENST00000489554 WDR61Q9GZS3 305 aaKnown RBP8.08□□□□□ -1.12
SCAMP4-208ENST00000489554 LSM4Q9Y4Z0 139 aaKnown RBP8.08□□□□□ -1.12
SCAMP4-208ENST00000489554 IGKV1OR2-108A0A075B7D4 117 aa8.07□□□□□ -1.12
SCAMP4-208ENST00000489554 IGHV3-21A0A0B4J1V1 117 aa8.07□□□□□ -1.12
SCAMP4-208ENST00000489554 TRAV1-1A0A0B4J248 108 aa8.07□□□□□ -1.12
SCAMP4-208ENST00000489554 FAM223BA6NKX1 122 aa8.07□□□□□ -1.12
SCAMP4-208ENST00000489554 IGHV3-48P01763 117 aa8.07□□□□□ -1.12
SCAMP4-208ENST00000489554 IFNA4P05014 189 aa8.07□□□□□ -1.12
SCAMP4-208ENST00000489554 SUB1P53999 127 aaKnown RBP eCLIP8.07□□□□□ -1.12
SCAMP4-208ENST00000489554 DLK1P80370 383 aa8.07□□□□□ -1.12
SCAMP4-208ENST00000489554 GAMTQ14353 236 aa8.07□□□□□ -1.12
SCAMP4-208ENST00000489554 ZNF343Q6P1L6 599 aa8.07□□□□□ -1.12
SCAMP4-208ENST00000489554 FAM223AQ8IWN6 122 aa8.07□□□□□ -1.12
SCAMP4-208ENST00000489554 BPIFCQ8NFQ6 507 aa8.07□□□□□ -1.12
SCAMP4-208ENST00000489554 OR1L6Q8NGR2 347 aa8.07□□□□□ -1.12
SCAMP4-208ENST00000489554 FAM213BQ8TBF2 198 aa8.07□□□□□ -1.12
SCAMP4-208ENST00000489554 MISP3Q96FF7 219 aa8.07□□□□□ -1.12
SCAMP4-208ENST00000489554 CCDC140Q96MF4 163 aa8.07□□□□□ -1.12
SCAMP4-208ENST00000489554 PEF1Q9UBV8 284 aaKnown RBP8.07□□□□□ -1.12
SCAMP4-208ENST00000489554 S4R3C0 116 aa8.07□□□□□ -1.12
SCAMP4-208ENST00000489554 IGKV1D-37A0A075B6S9 117 aa8.06□□□□□ -1.12
SCAMP4-208ENST00000489554 F8W036 122 aa8.06□□□□□ -1.12
SCAMP4-208ENST00000489554 CORTO00230 105 aa8.06□□□□□ -1.12
SCAMP4-208ENST00000489554 SNAPINO95295 136 aa8.06□□□□□ -1.12
SCAMP4-208ENST00000489554 IFNA1P01562 189 aa8.06□□□□□ -1.12
SCAMP4-208ENST00000489554 NHLRC4P0CG21 123 aaPredicted RBP8.06□□□□□ -1.12
SCAMP4-208ENST00000489554 DEFA4P12838 97 aa8.06□□□□□ -1.12
SCAMP4-208ENST00000489554 HIST1H1BP16401 226 aaKnown RBP8.06□□□□□ -1.12
SCAMP4-208ENST00000489554 GPX4P36969 197 aaPredicted RBP8.06□□□□□ -1.12
SCAMP4-208ENST00000489554 TMEM41BQ5BJD5 291 aa8.06□□□□□ -1.12
SCAMP4-208ENST00000489554 FAM209BQ5JX69 171 aa8.06□□□□□ -1.12
SCAMP4-208ENST00000489554 SLC16A13Q7RTY0 426 aa8.06□□□□□ -1.12
SCAMP4-208ENST00000489554 NECAP1Q8NC96 275 aa8.06□□□□□ -1.12
SCAMP4-208ENST00000489554 ZNF502Q8TBZ5 544 aa8.06□□□□□ -1.12
SCAMP4-208ENST00000489554 VN1R17PQ8TDU5 208 aa8.06□□□□□ -1.12
SCAMP4-208ENST00000489554 CACNG8Q8WXS5 425 aa8.06□□□□□ -1.12
SCAMP4-208ENST00000489554 NPVFQ9HCQ7 196 aa8.06□□□□□ -1.12
SCAMP4-208ENST00000489554 FBXL7Q9UJT9 491 aa8.06□□□□□ -1.12
SCAMP4-208ENST00000489554 CYB5BO43169 146 aa8.05□□□□□ -1.12
SCAMP4-208ENST00000489554 NDUFS6O75380 124 aaKnown RBP8.05□□□□□ -1.12
SCAMP4-208ENST00000489554 APOC3P02656 99 aa8.05□□□□□ -1.12
SCAMP4-208ENST00000489554 CD5P06127 495 aa8.05□□□□□ -1.12
SCAMP4-208ENST00000489554 FCGR2BP31994 310 aaPredicted RBP8.05□□□□□ -1.12
SCAMP4-208ENST00000489554 OPRK1P41145 380 aa8.05□□□□□ -1.12
SCAMP4-208ENST00000489554 PPT1P50897 306 aa8.05□□□□□ -1.12
SCAMP4-208ENST00000489554 ATP5G2Q06055 141 aa8.05□□□□□ -1.12
SCAMP4-208ENST00000489554 PMS2P11Q13670 270 aa8.05□□□□□ -1.12
SCAMP4-208ENST00000489554 KLF5Q13887 457 aaPredicted RBP8.05□□□□□ -1.12
SCAMP4-208ENST00000489554 GUK1Q16774 197 aa8.05□□□□□ -1.12
SCAMP4-208ENST00000489554 C15orf32Q32M92 178 aa8.05□□□□□ -1.12
SCAMP4-208ENST00000489554 ACOT6Q3I5F7 207 aaPredicted RBP8.05□□□□□ -1.12
SCAMP4-208ENST00000489554 TMEM116Q8NCL8 245 aa8.05□□□□□ -1.12
SCAMP4-208ENST00000489554 MBD3L1Q8WWY6 194 aa8.05□□□□□ -1.12
SCAMP4-208ENST00000489554 LINC00052Q96N35 136 aa8.05□□□□□ -1.12
SCAMP4-208ENST00000489554 EIF5A2Q9GZV4 153 aaKnown RBP8.05□□□□□ -1.12
SCAMP4-208ENST00000489554 SH3BGRL3Q9H299 93 aa8.05□□□□□ -1.12
SCAMP4-208ENST00000489554 WDR83OSQ9Y284 106 aa8.05□□□□□ -1.12
SCAMP4-208ENST00000489554 CARHSP1Q9Y2V2 147 aaKnown RBP8.05□□□□□ -1.12
SCAMP4-208ENST00000489554 SMAD5-AS1Q9Y6J3 95 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms