RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 NEU1Q99519 415 aa8.56□□□□□ -1.04
SFXN3-207ENST00000489434 EXTL2Q9UBQ6 330 aa8.56□□□□□ -1.04
SFXN3-207ENST00000489434 RFNGQ9Y644 331 aa8.56□□□□□ -1.04
SFXN3-207ENST00000489434 HLA-DRB4X5D2U9 266 aa8.56□□□□□ -1.04
SFXN3-207ENST00000489434 IGHV3OR16-12A0A075B7B8 117 aa8.55□□□□□ -1.04
SFXN3-207ENST00000489434 CD74P04233 296 aa8.55□□□□□ -1.04
SFXN3-207ENST00000489434 FABP1P07148 127 aa8.55□□□□□ -1.04
SFXN3-207ENST00000489434 SSBP1Q04837 148 aaKnown RBP8.55□□□□□ -1.04
SFXN3-207ENST00000489434 SURF2Q15527 256 aaPredicted RBP8.55□□□□□ -1.04
SFXN3-207ENST00000489434 GPR107Q5VW38 600 aa8.55□□□□□ -1.04
SFXN3-207ENST00000489434 TMEM268Q5VZI3 342 aa8.55□□□□□ -1.04
SFXN3-207ENST00000489434 ZNF705AQ6ZN79 300 aaPredicted RBP8.55□□□□□ -1.04
SFXN3-207ENST00000489434 OR4D10Q8NGI6 311 aa8.55□□□□□ -1.04
SFXN3-207ENST00000489434 OR51G1Q8NGK1 321 aa8.55□□□□□ -1.04
SFXN3-207ENST00000489434 COQ8AQ8NI60 647 aa8.55□□□□□ -1.04
SFXN3-207ENST00000489434 GLYATL2Q8WU03 294 aa8.55□□□□□ -1.04
SFXN3-207ENST00000489434 LINC00052Q96N35 136 aa8.55□□□□□ -1.04
SFXN3-207ENST00000489434 NAA60Q9H7X0 242 aa8.55□□□□□ -1.04
SFXN3-207ENST00000489434 DNAH2Q9P225 4427 aa8.55□□□□□ -1.04
SFXN3-207ENST00000489434 ZNF705FA8MVS1 300 aaPredicted RBP8.54□□□□□ -1.04
SFXN3-207ENST00000489434 DISC1C4P0D8 188 aa8.54□□□□□ -1.04
SFXN3-207ENST00000489434 ZNF701M0R085 212 aaPredicted RBP8.54□□□□□ -1.04
SFXN3-207ENST00000489434 RTL8CO15255 209 aa8.54□□□□□ -1.04
SFXN3-207ENST00000489434 IGKV3-20P01619 116 aa8.54□□□□□ -1.04
SFXN3-207ENST00000489434 ZNF705DP0CH99 300 aaPredicted RBP8.54□□□□□ -1.04
SFXN3-207ENST00000489434 ZNF705BP0CI00 300 aaPredicted RBP8.54□□□□□ -1.04
SFXN3-207ENST00000489434 SULT1A3P0DMM9 295 aa8.54□□□□□ -1.04
SFXN3-207ENST00000489434 SULT1A4P0DMN0 295 aa8.54□□□□□ -1.04
SFXN3-207ENST00000489434 PSG1P11464 419 aa8.54□□□□□ -1.04
SFXN3-207ENST00000489434 ZNF182P17025 639 aaPredicted RBP8.54□□□□□ -1.04
SFXN3-207ENST00000489434 MRPS10P82664 201 aaKnown RBP8.54□□□□□ -1.04
SFXN3-207ENST00000489434 KLF9Q13886 244 aaPredicted RBP8.54□□□□□ -1.04
SFXN3-207ENST00000489434 SPATA31B1PQ5VZV4 182 aa8.54□□□□□ -1.04
SFXN3-207ENST00000489434 FOXI2Q6ZQN5 318 aa8.54□□□□□ -1.04
SFXN3-207ENST00000489434 SELENOHQ8IZQ5 122 aaKnown RBP8.54□□□□□ -1.04
SFXN3-207ENST00000489434 RNF125Q96EQ8 232 aa8.54□□□□□ -1.04
SFXN3-207ENST00000489434 NIPSNAP3BQ9BS92 247 aa8.54□□□□□ -1.04
SFXN3-207ENST00000489434 PBDC1Q9BVG4 233 aa8.54□□□□□ -1.04
SFXN3-207ENST00000489434 KCNIP3Q9Y2W7 256 aa8.54□□□□□ -1.04
SFXN3-207ENST00000489434 GOLT1BQ9Y3E0 138 aa8.54□□□□□ -1.04
SFXN3-207ENST00000489434 U3KQ87 197 aa8.54□□□□□ -1.04
SFXN3-207ENST00000489434 ZFP92A6NM28 416 aa8.53□□□□□ -1.04
SFXN3-207ENST00000489434 GABARAPH6UMI1 98 aa8.53□□□□□ -1.04
SFXN3-207ENST00000489434 GABARAPO95166 117 aa8.53□□□□□ -1.04
SFXN3-207ENST00000489434 PSMB3P49720 205 aa8.53□□□□□ -1.04
SFXN3-207ENST00000489434 ATP5IP56385 69 aaPredicted RBP8.53□□□□□ -1.04
SFXN3-207ENST00000489434 NMSQ5H8A3 153 aa8.53□□□□□ -1.04
SFXN3-207ENST00000489434 C1orf194Q5T5A4 169 aa8.53□□□□□ -1.04
SFXN3-207ENST00000489434 SAMD13Q5VXD3 122 aa8.53□□□□□ -1.04
SFXN3-207ENST00000489434 OR8G2PQ6IF36 304 aa8.53□□□□□ -1.04
SFXN3-207ENST00000489434 EBLN2Q6P2I7 272 aa8.53□□□□□ -1.04
SFXN3-207ENST00000489434 GPR146Q96CH1 333 aa8.53□□□□□ -1.04
SFXN3-207ENST00000489434 CLUHP3Q96NS8 147 aa8.53□□□□□ -1.04
SFXN3-207ENST00000489434 C7orf50Q9BRJ6 194 aaKnown RBP8.53□□□□□ -1.04
SFXN3-207ENST00000489434 RTBDNQ9BSG5 229 aaPredicted RBP8.53□□□□□ -1.04
SFXN3-207ENST00000489434 MRPS26Q9BYN8 205 aaKnown RBP8.53□□□□□ -1.04
SFXN3-207ENST00000489434 IGLV2-18A0A075B6J9 118 aa8.52□□□□□ -1.05
SFXN3-207ENST00000489434 CRYM-AS1A6NIL9 109 aa8.52□□□□□ -1.05
SFXN3-207ENST00000489434 NXPH3O95157 252 aa8.52□□□□□ -1.05
SFXN3-207ENST00000489434 HBE1P02100 147 aa8.52□□□□□ -1.05
SFXN3-207ENST00000489434 HTN3P15516 51 aa8.52□□□□□ -1.05
SFXN3-207ENST00000489434 FXYD7P58549 80 aa8.52□□□□□ -1.05
SFXN3-207ENST00000489434 RNF212Q495C1 297 aa8.52□□□□□ -1.05
SFXN3-207ENST00000489434 LGI3Q8N145 548 aa8.52□□□□□ -1.05
SFXN3-207ENST00000489434 OR4B1Q8NGF8 309 aa8.52□□□□□ -1.05
SFXN3-207ENST00000489434 LHFPL5Q8TAF8 219 aa8.52□□□□□ -1.05
SFXN3-207ENST00000489434 TMEM170AQ8WVE7 144 aa8.52□□□□□ -1.05
SFXN3-207ENST00000489434 IL22RA2Q969J5 263 aa8.52□□□□□ -1.05
SFXN3-207ENST00000489434 SLC35E1Q96K37 410 aa8.52□□□□□ -1.05
SFXN3-207ENST00000489434 PRRT1Q99946 306 aa8.52□□□□□ -1.05
SFXN3-207ENST00000489434 SCRT1Q9BWW7 348 aa8.52□□□□□ -1.05
SFXN3-207ENST00000489434 SAV1Q9H4B6 383 aaPredicted RBP8.52□□□□□ -1.05
SFXN3-207ENST00000489434 DKK2Q9UBU2 259 aa8.52□□□□□ -1.05
SFXN3-207ENST00000489434 TMEM56-RWDD3S4R434 201 aa8.52□□□□□ -1.05
SFXN3-207ENST00000489434 PIGBOS1A0A0B4J2F0 54 aa8.51□□□□□ -1.05
SFXN3-207ENST00000489434 SNRPGP15A8MWD9 76 aa8.51□□□□□ -1.05
SFXN3-207ENST00000489434 ISLRO14498 428 aa8.51□□□□□ -1.05
SFXN3-207ENST00000489434 RGS5O15539 181 aa8.51□□□□□ -1.05
SFXN3-207ENST00000489434 AKAIN1P0CW23 69 aa8.51□□□□□ -1.05
SFXN3-207ENST00000489434 GPX4P36969 197 aaPredicted RBP8.51□□□□□ -1.05
SFXN3-207ENST00000489434 CCR6P51684 374 aa8.51□□□□□ -1.05
SFXN3-207ENST00000489434 SUPT4H1P63272 117 aaKnown RBP8.51□□□□□ -1.05
SFXN3-207ENST00000489434 PSG9Q00887 426 aa8.51□□□□□ -1.05
SFXN3-207ENST00000489434 OXA1LQ15070 435 aa8.51□□□□□ -1.05
SFXN3-207ENST00000489434 GDF5OSQ5U4N7 250 aa8.51□□□□□ -1.05
SFXN3-207ENST00000489434 FAM222AQ5U5X8 452 aa8.51□□□□□ -1.05
SFXN3-207ENST00000489434 FAAP20Q6NZ36 180 aa8.51□□□□□ -1.05
SFXN3-207ENST00000489434 OR8I2Q8N0Y5 310 aa8.51□□□□□ -1.05
SFXN3-207ENST00000489434 DTD1Q8TEA8 209 aa8.51□□□□□ -1.05
SFXN3-207ENST00000489434 SCGB3A2Q96PL1 93 aa8.51□□□□□ -1.05
SFXN3-207ENST00000489434 WDR12Q9GZL7 423 aaKnown RBP8.51□□□□□ -1.05
SFXN3-207ENST00000489434 PKD1P98161 4303 aa8.5□□□□□ -1.05
SFXN3-207ENST00000489434 DNAH11Q96DT5 4516 aa8.5□□□□□ -1.05
SFXN3-207ENST00000489434 MEOX2P50222 304 aa8.5□□□□□ -1.05
SFXN3-207ENST00000489434 LYZP61626 148 aa8.5□□□□□ -1.05
SFXN3-207ENST00000489434 SRPXP78539 464 aa8.5□□□□□ -1.05
SFXN3-207ENST00000489434 SMCO1Q147U7 214 aa8.5□□□□□ -1.05
SFXN3-207ENST00000489434 RRN3P1Q2M238 152 aa8.5□□□□□ -1.05
SFXN3-207ENST00000489434 C1orf134Q5TEV5 83 aa8.5□□□□□ -1.05
SFXN3-207ENST00000489434 Q6ZR54 194 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms