RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 IFNA10P01566 189 aa6.72□□□□□ -1.33
SNX17-207ENST00000489402 IFNA21P01568 189 aa6.72□□□□□ -1.33
SNX17-207ENST00000489402 CD74P04233 296 aa6.72□□□□□ -1.33
SNX17-207ENST00000489402 RD3LP0DJH9 198 aa6.72□□□□□ -1.33
SNX17-207ENST00000489402 HLA-DRB4P13762 266 aa6.72□□□□□ -1.33
SNX17-207ENST00000489402 NKX2-1P43699 371 aaPredicted RBP6.72□□□□□ -1.33
SNX17-207ENST00000489402 ZNF705AQ6ZN79 300 aaPredicted RBP6.72□□□□□ -1.33
SNX17-207ENST00000489402 TMEM229BQ8NBD8 167 aa6.72□□□□□ -1.33
SNX17-207ENST00000489402 OR4D10Q8NGI6 311 aa6.72□□□□□ -1.33
SNX17-207ENST00000489402 NPIPB3Q92617 1050 aa6.72□□□□□ -1.33
SNX17-207ENST00000489402 NEU1Q99519 415 aa6.72□□□□□ -1.33
SNX17-207ENST00000489402 MRPS26Q9BYN8 205 aaKnown RBP6.72□□□□□ -1.33
SNX17-207ENST00000489402 NAA60Q9H7X0 242 aa6.72□□□□□ -1.33
SNX17-207ENST00000489402 HLA-DRB4X5D2U9 266 aa6.72□□□□□ -1.33
SNX17-207ENST00000489402 IGHV3OR16-12A0A075B7B8 117 aa6.71□□□□□ -1.34
SNX17-207ENST00000489402 NXPH3O95157 252 aa6.71□□□□□ -1.34
SNX17-207ENST00000489402 ZNF182P17025 639 aaPredicted RBP6.71□□□□□ -1.34
SNX17-207ENST00000489402 ID1P41134 155 aa6.71□□□□□ -1.34
SNX17-207ENST00000489402 EMP1P54849 157 aa6.71□□□□□ -1.34
SNX17-207ENST00000489402 SSBP1Q04837 148 aaKnown RBP6.71□□□□□ -1.34
SNX17-207ENST00000489402 MEF2DQ14814 521 aa6.71□□□□□ -1.34
SNX17-207ENST00000489402 SURF2Q15527 256 aaPredicted RBP6.71□□□□□ -1.34
SNX17-207ENST00000489402 LGALS9BQ3B8N2 356 aa6.71□□□□□ -1.34
SNX17-207ENST00000489402 GPR107Q5VW38 600 aa6.71□□□□□ -1.34
SNX17-207ENST00000489402 TMEM268Q5VZI3 342 aa6.71□□□□□ -1.34
SNX17-207ENST00000489402 STEAP1BQ6NZ63 245 aa6.71□□□□□ -1.34
SNX17-207ENST00000489402 SELENOHQ8IZQ5 122 aaKnown RBP6.71□□□□□ -1.34
SNX17-207ENST00000489402 OR51G1Q8NGK1 321 aa6.71□□□□□ -1.34
SNX17-207ENST00000489402 LHFPL5Q8TAF8 219 aa6.71□□□□□ -1.34
SNX17-207ENST00000489402 GLYATL2Q8WU03 294 aa6.71□□□□□ -1.34
SNX17-207ENST00000489402 GPR146Q96CH1 333 aa6.71□□□□□ -1.34
SNX17-207ENST00000489402 FAM210BQ96KR6 192 aa6.71□□□□□ -1.34
SNX17-207ENST00000489402 PBDC1Q9BVG4 233 aa6.71□□□□□ -1.34
SNX17-207ENST00000489402 RFNGQ9Y644 331 aa6.71□□□□□ -1.34
SNX17-207ENST00000489402 HSPG2P98160 4391 aa6.7□□□□□ -1.34
SNX17-207ENST00000489402 ZNF705FA8MVS1 300 aaPredicted RBP6.7□□□□□ -1.34
SNX17-207ENST00000489402 DISC1C4P0D8 188 aa6.7□□□□□ -1.34
SNX17-207ENST00000489402 GABARAPH6UMI1 98 aa6.7□□□□□ -1.34
SNX17-207ENST00000489402 RTL8CO15255 209 aa6.7□□□□□ -1.34
SNX17-207ENST00000489402 GABARAPO95166 117 aa6.7□□□□□ -1.34
SNX17-207ENST00000489402 IGKV3-20P01619 116 aa6.7□□□□□ -1.34
SNX17-207ENST00000489402 ZNF705DP0CH99 300 aaPredicted RBP6.7□□□□□ -1.34
SNX17-207ENST00000489402 ZNF705BP0CI00 300 aaPredicted RBP6.7□□□□□ -1.34
SNX17-207ENST00000489402 SULT1A3P0DMM9 295 aa6.7□□□□□ -1.34
SNX17-207ENST00000489402 SULT1A4P0DMN0 295 aa6.7□□□□□ -1.34
SNX17-207ENST00000489402 PSG1P11464 419 aa6.7□□□□□ -1.34
SNX17-207ENST00000489402 ALDH3B2P48448 385 aa6.7□□□□□ -1.34
SNX17-207ENST00000489402 DEFB1P60022 68 aa6.7□□□□□ -1.34
SNX17-207ENST00000489402 MRPS10P82664 201 aaKnown RBP6.7□□□□□ -1.34
SNX17-207ENST00000489402 SOHLH1Q5JUK2 328 aa6.7□□□□□ -1.34
SNX17-207ENST00000489402 LCE2AQ5TA79 106 aaPredicted RBP6.7□□□□□ -1.34
SNX17-207ENST00000489402 OR8G2PQ6IF36 304 aa6.7□□□□□ -1.34
SNX17-207ENST00000489402 FAAP20Q6NZ36 180 aa6.7□□□□□ -1.34
SNX17-207ENST00000489402 FOXI2Q6ZQN5 318 aa6.7□□□□□ -1.34
SNX17-207ENST00000489402 COQ8AQ8NI60 647 aa6.7□□□□□ -1.34
SNX17-207ENST00000489402 RNF125Q96EQ8 232 aa6.7□□□□□ -1.34
SNX17-207ENST00000489402 LINC00052Q96N35 136 aa6.7□□□□□ -1.34
SNX17-207ENST00000489402 NDUFA13Q9P0J0 144 aa6.7□□□□□ -1.34
SNX17-207ENST00000489402 U3KQ87 197 aa6.7□□□□□ -1.34
SNX17-207ENST00000489402 CRYM-AS1A6NIL9 109 aa6.69□□□□□ -1.34
SNX17-207ENST00000489402 ZFP92A6NM28 416 aa6.69□□□□□ -1.34
SNX17-207ENST00000489402 RGS5O15539 181 aa6.69□□□□□ -1.34
SNX17-207ENST00000489402 HBE1P02100 147 aa6.69□□□□□ -1.34
SNX17-207ENST00000489402 FABP1P07148 127 aa6.69□□□□□ -1.34
SNX17-207ENST00000489402 HTN3P15516 51 aa6.69□□□□□ -1.34
SNX17-207ENST00000489402 PSMB3P49720 205 aa6.69□□□□□ -1.34
SNX17-207ENST00000489402 FXYD7P58549 80 aa6.69□□□□□ -1.34
SNX17-207ENST00000489402 KLF9Q13886 244 aaPredicted RBP6.69□□□□□ -1.34
SNX17-207ENST00000489402 NMSQ5H8A3 153 aa6.69□□□□□ -1.34
SNX17-207ENST00000489402 GDF5OSQ5U4N7 250 aa6.69□□□□□ -1.34
SNX17-207ENST00000489402 FAM222AQ5U5X8 452 aa6.69□□□□□ -1.34
SNX17-207ENST00000489402 SPATA31B1PQ5VZV4 182 aa6.69□□□□□ -1.34
SNX17-207ENST00000489402 EBLN2Q6P2I7 272 aa6.69□□□□□ -1.34
SNX17-207ENST00000489402 OR4B1Q8NGF8 309 aa6.69□□□□□ -1.34
SNX17-207ENST00000489402 TMEM170AQ8WVE7 144 aa6.69□□□□□ -1.34
SNX17-207ENST00000489402 IL22RA2Q969J5 263 aa6.69□□□□□ -1.34
SNX17-207ENST00000489402 SLC35E1Q96K37 410 aa6.69□□□□□ -1.34
SNX17-207ENST00000489402 NIPSNAP3BQ9BS92 247 aa6.69□□□□□ -1.34
SNX17-207ENST00000489402 RTBDNQ9BSG5 229 aaPredicted RBP6.69□□□□□ -1.34
SNX17-207ENST00000489402 NAA50Q9GZZ1 169 aaKnown RBP6.69□□□□□ -1.34
SNX17-207ENST00000489402 SAV1Q9H4B6 383 aaPredicted RBP6.69□□□□□ -1.34
SNX17-207ENST00000489402 KCNIP3Q9Y2W7 256 aa6.69□□□□□ -1.34
SNX17-207ENST00000489402 GOLT1BQ9Y3E0 138 aa6.69□□□□□ -1.34
SNX17-207ENST00000489402 IGLV2-18A0A075B6J9 118 aa6.68□□□□□ -1.34
SNX17-207ENST00000489402 AKAIN1P0CW23 69 aa6.68□□□□□ -1.34
SNX17-207ENST00000489402 ATP5IP56385 69 aaPredicted RBP6.68□□□□□ -1.34
SNX17-207ENST00000489402 LYZP61626 148 aa6.68□□□□□ -1.34
SNX17-207ENST00000489402 SUPT4H1P63272 117 aaKnown RBP6.68□□□□□ -1.34
SNX17-207ENST00000489402 RNF212Q495C1 297 aa6.68□□□□□ -1.34
SNX17-207ENST00000489402 C1orf194Q5T5A4 169 aa6.68□□□□□ -1.34
SNX17-207ENST00000489402 SAMD13Q5VXD3 122 aa6.68□□□□□ -1.34
SNX17-207ENST00000489402 LGI3Q8N145 548 aa6.68□□□□□ -1.34
SNX17-207ENST00000489402 DTD1Q8TEA8 209 aa6.68□□□□□ -1.34
SNX17-207ENST00000489402 PPP1R14BQ96C90 147 aa6.68□□□□□ -1.34
SNX17-207ENST00000489402 CLUHP3Q96NS8 147 aa6.68□□□□□ -1.34
SNX17-207ENST00000489402 PRRT1Q99946 306 aa6.68□□□□□ -1.34
SNX17-207ENST00000489402 C7orf50Q9BRJ6 194 aaKnown RBP6.68□□□□□ -1.34
SNX17-207ENST00000489402 RBM38Q9H0Z9 239 aaKnown RBP6.68□□□□□ -1.34
SNX17-207ENST00000489402 DKK2Q9UBU2 259 aa6.68□□□□□ -1.34
SNX17-207ENST00000489402 GPR132Q9UNW8 380 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms