RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 CRXO43186 299 aaPredicted RBP7.67□□□□□ -1.18
HDAC6-233ENST00000489352 ELK1P19419 428 aa7.67□□□□□ -1.18
HDAC6-233ENST00000489352 HNRNPA3P51991 378 aaKnown RBP7.67□□□□□ -1.18
HDAC6-233ENST00000489352 DNAL1Q4LDG9 190 aa7.67□□□□□ -1.18
HDAC6-233ENST00000489352 SAMD13Q5VXD3 122 aa7.67□□□□□ -1.18
HDAC6-233ENST00000489352 LYPD5Q6UWN5 251 aa7.67□□□□□ -1.18
HDAC6-233ENST00000489352 AMTNQ6UX39 209 aa7.67□□□□□ -1.18
HDAC6-233ENST00000489352 ZNF818PQ6ZRF7 136 aa7.67□□□□□ -1.18
HDAC6-233ENST00000489352 CCDC28AQ8IWP9 274 aa7.67□□□□□ -1.18
HDAC6-233ENST00000489352 ZNF485Q8NCK3 441 aa7.67□□□□□ -1.18
HDAC6-233ENST00000489352 OR11H7Q8NGC8 314 aa7.67□□□□□ -1.18
HDAC6-233ENST00000489352 OR1S2Q8NGQ3 325 aa7.67□□□□□ -1.18
HDAC6-233ENST00000489352 CIRBP-AS1Q8TBR5 109 aa7.67□□□□□ -1.18
HDAC6-233ENST00000489352 APH1BQ8WW43 257 aa7.67□□□□□ -1.18
HDAC6-233ENST00000489352 FCAMRQ8WWV6 532 aa7.67□□□□□ -1.18
HDAC6-233ENST00000489352 DAZAP1Q96EP5 407 aaKnown RBP7.67□□□□□ -1.18
HDAC6-233ENST00000489352 C16orf92Q96LL3 132 aa7.67□□□□□ -1.18
HDAC6-233ENST00000489352 ELF5Q9UKW6 265 aaPredicted RBP7.67□□□□□ -1.18
HDAC6-233ENST00000489352 MUC2Q02817 5179 aa7.66□□□□□ -1.18
HDAC6-233ENST00000489352 LOC100130705A0A1B0GUX0 176 aa7.66□□□□□ -1.18
HDAC6-233ENST00000489352 PPYP01298 95 aa7.66□□□□□ -1.18
HDAC6-233ENST00000489352 WNT4P56705 351 aa7.66□□□□□ -1.18
HDAC6-233ENST00000489352 HSPE1P61604 102 aaKnown RBP7.66□□□□□ -1.18
HDAC6-233ENST00000489352 GAMTQ14353 236 aa7.66□□□□□ -1.18
HDAC6-233ENST00000489352 CDNFQ49AH0 187 aa7.66□□□□□ -1.18
HDAC6-233ENST00000489352 SPINK9Q5DT21 86 aa7.66□□□□□ -1.18
HDAC6-233ENST00000489352 HES5Q5TA89 166 aa7.66□□□□□ -1.18
HDAC6-233ENST00000489352 H2BFWTQ7Z2G1 175 aa7.66□□□□□ -1.18
HDAC6-233ENST00000489352 TMEM17Q86X19 198 aa7.66□□□□□ -1.18
HDAC6-233ENST00000489352 TMPRSS5Q9H3S3 457 aa7.66□□□□□ -1.18
HDAC6-233ENST00000489352 MRPL36Q9P0J6 103 aaKnown RBP7.66□□□□□ -1.18
HDAC6-233ENST00000489352 TRGV2A0A075B6R0 118 aa7.65□□□□□ -1.18
HDAC6-233ENST00000489352 PAX4O43316 350 aa7.65□□□□□ -1.18
HDAC6-233ENST00000489352 RLN1P04808 185 aa7.65□□□□□ -1.18
HDAC6-233ENST00000489352 UCHL1P09936 223 aa7.65□□□□□ -1.18
HDAC6-233ENST00000489352 OR10J1P30954 320 aa7.65□□□□□ -1.18
HDAC6-233ENST00000489352 CBX5P45973 191 aa7.65□□□□□ -1.18
HDAC6-233ENST00000489352 CNN1P51911 297 aaKnown RBP7.65□□□□□ -1.18
HDAC6-233ENST00000489352 OR10A3P58181 314 aa7.65□□□□□ -1.18
HDAC6-233ENST00000489352 YPEL3P61236 119 aaPredicted RBP7.65□□□□□ -1.18
HDAC6-233ENST00000489352 MLANAQ16655 118 aa7.65□□□□□ -1.18
HDAC6-233ENST00000489352 LINC01620Q4KN68 170 aa7.65□□□□□ -1.18
HDAC6-233ENST00000489352 IDNKQ5T6J7 187 aa7.65□□□□□ -1.18
HDAC6-233ENST00000489352 SLC35G3Q8N808 338 aa7.65□□□□□ -1.18
HDAC6-233ENST00000489352 RNASE8Q8TDE3 154 aaKnown RBP7.65□□□□□ -1.18
HDAC6-233ENST00000489352 GPR146Q96CH1 333 aa7.65□□□□□ -1.18
HDAC6-233ENST00000489352 ATG5Q9H1Y0 275 aa7.65□□□□□ -1.18
HDAC6-233ENST00000489352 RCL1Q9Y2P8 373 aaKnown RBP7.65□□□□□ -1.18
HDAC6-233ENST00000489352 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.64□□□□□ -1.19
HDAC6-233ENST00000489352 A8MTW9 85 aa7.64□□□□□ -1.19
HDAC6-233ENST00000489352 WBP4O75554 376 aaKnown RBP7.64□□□□□ -1.19
HDAC6-233ENST00000489352 RD3LP0DJH9 198 aa7.64□□□□□ -1.19
HDAC6-233ENST00000489352 HSPA13P48723 471 aa7.64□□□□□ -1.19
HDAC6-233ENST00000489352 GNG2P59768 71 aa7.64□□□□□ -1.19
HDAC6-233ENST00000489352 RHOBP62745 196 aa7.64□□□□□ -1.19
HDAC6-233ENST00000489352 TDRG1Q3Y452 100 aa7.64□□□□□ -1.19
HDAC6-233ENST00000489352 WFDC10BQ8IUB3 73 aa7.64□□□□□ -1.19
HDAC6-233ENST00000489352 LINC00612Q8N6U2 182 aa7.64□□□□□ -1.19
HDAC6-233ENST00000489352 GFI1Q99684 422 aa7.64□□□□□ -1.19
HDAC6-233ENST00000489352 PBDC1Q9BVG4 233 aa7.64□□□□□ -1.19
HDAC6-233ENST00000489352 SLC25A39Q9BZJ4 359 aaPredicted RBP7.64□□□□□ -1.19
HDAC6-233ENST00000489352 Q9HAA7 133 aa7.64□□□□□ -1.19
HDAC6-233ENST00000489352 ENY2Q9NPA8 101 aa7.64□□□□□ -1.19
HDAC6-233ENST00000489352 V9GY05 133 aa7.64□□□□□ -1.19
HDAC6-233ENST00000489352 BOLA2-SMG1P6H3BVE0 249 aa7.63□□□□□ -1.19
HDAC6-233ENST00000489352 SOCS3O14543 225 aa7.63□□□□□ -1.19
HDAC6-233ENST00000489352 ARL6IP5O75915 188 aa7.63□□□□□ -1.19
HDAC6-233ENST00000489352 ATP5HO75947 161 aa7.63□□□□□ -1.19
HDAC6-233ENST00000489352 IGLV2-11P01706 119 aa7.63□□□□□ -1.19
HDAC6-233ENST00000489352 FCER2P06734 321 aa7.63□□□□□ -1.19
HDAC6-233ENST00000489352 RAB6AP20340 208 aa7.63□□□□□ -1.19
HDAC6-233ENST00000489352 MEOX2P50222 304 aa7.63□□□□□ -1.19
HDAC6-233ENST00000489352 HERV-K104P61576 105 aa7.63□□□□□ -1.19
HDAC6-233ENST00000489352 MRPL23Q16540 153 aaKnown RBP7.63□□□□□ -1.19
HDAC6-233ENST00000489352 NEGR1Q7Z3B1 354 aa7.63□□□□□ -1.19
HDAC6-233ENST00000489352 NUDCD2Q8WVJ2 157 aa7.63□□□□□ -1.19
HDAC6-233ENST00000489352 TMEM37Q8WXS4 190 aa7.63□□□□□ -1.19
HDAC6-233ENST00000489352 PPP1R14BQ96C90 147 aa7.63□□□□□ -1.19
HDAC6-233ENST00000489352 PDCD10Q9BUL8 212 aa7.63□□□□□ -1.19
HDAC6-233ENST00000489352 PGLYRP1O75594 196 aaPredicted RBP7.62□□□□□ -1.19
HDAC6-233ENST00000489352 IGLC1P0CG04 106 aa7.62□□□□□ -1.19
HDAC6-233ENST00000489352 PSMB9P28065 219 aa7.62□□□□□ -1.19
HDAC6-233ENST00000489352 RPL5P46777 297 aaKnown RBP7.62□□□□□ -1.19
HDAC6-233ENST00000489352 RND2P52198 227 aa7.62□□□□□ -1.19
HDAC6-233ENST00000489352 RPS25P62851 125 aaKnown RBP7.62□□□□□ -1.19
HDAC6-233ENST00000489352 CD300CQ08708 224 aa7.62□□□□□ -1.19
HDAC6-233ENST00000489352 OR8I2Q8N0Y5 310 aa7.62□□□□□ -1.19
HDAC6-233ENST00000489352 HSD17B11Q8NBQ5 300 aa7.62□□□□□ -1.19
HDAC6-233ENST00000489352 ZNF555Q8NEP9 628 aa7.62□□□□□ -1.19
HDAC6-233ENST00000489352 OR51G1Q8NGK1 321 aa7.62□□□□□ -1.19
HDAC6-233ENST00000489352 OR52E5Q8NH55 327 aa7.62□□□□□ -1.19
HDAC6-233ENST00000489352 RBFOX3A6NFN3 312 aa7.61□□□□□ -1.19
HDAC6-233ENST00000489352 H7BYZ3 331 aa7.61□□□□□ -1.19
HDAC6-233ENST00000489352 RNASE2P10153 161 aaKnown RBP7.61□□□□□ -1.19
HDAC6-233ENST00000489352 PTHLHP12272 177 aa7.61□□□□□ -1.19
HDAC6-233ENST00000489352 CDKN1BP46527 198 aa7.61□□□□□ -1.19
HDAC6-233ENST00000489352 BEST4Q8NFU0 473 aa7.61□□□□□ -1.19
HDAC6-233ENST00000489352 C20orf173Q96LM9 149 aa7.61□□□□□ -1.19
HDAC6-233ENST00000489352 TM2D2Q9BX73 214 aa7.61□□□□□ -1.19
HDAC6-233ENST00000489352 CACNG5Q9UF02 275 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms