RNA–Protein interactions for RNA: ENST00000489318.1

C9orf3-220, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-220ENST00000489318 TMEM37Q8WXS4 190 aa8.91□□□□□ -0.98
C9orf3-220ENST00000489318 RAB24Q969Q5 203 aa8.91□□□□□ -0.98
C9orf3-220ENST00000489318 MS4A10Q96PG2 267 aa8.91□□□□□ -0.98
C9orf3-220ENST00000489318 HRH4Q9H3N8 390 aa8.91□□□□□ -0.98
C9orf3-220ENST00000489318 SEPSECSQ9HD40 501 aaKnown RBP8.91□□□□□ -0.98
C9orf3-220ENST00000489318 FUT9Q9Y231 359 aa8.91□□□□□ -0.98
C9orf3-220ENST00000489318 S4R3C0 116 aa8.91□□□□□ -0.98
C9orf3-220ENST00000489318 ELOA3CA0A087WX78 387 aaPredicted RBP8.9□□□□□ -0.98
C9orf3-220ENST00000489318 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.9□□□□□ -0.98
C9orf3-220ENST00000489318 A0A0G2JLM5 398 aa8.9□□□□□ -0.98
C9orf3-220ENST00000489318 WI2-2373I1.2A0A1W2PRP0 233 aa8.9□□□□□ -0.98
C9orf3-220ENST00000489318 CYSRT1A8MQ03 144 aa8.9□□□□□ -0.98
C9orf3-220ENST00000489318 TEX46H3BTG2 121 aa8.9□□□□□ -0.98
C9orf3-220ENST00000489318 TGOLN2O43493 480 aa8.9□□□□□ -0.98
C9orf3-220ENST00000489318 ATP6V1G1O75348 118 aa8.9□□□□□ -0.98
C9orf3-220ENST00000489318 CRLF1O75462 422 aa8.9□□□□□ -0.98
C9orf3-220ENST00000489318 RAB9AP51151 201 aa8.9□□□□□ -0.98
C9orf3-220ENST00000489318 KIAA0141Q14154 515 aaPredicted RBP8.9□□□□□ -0.98
C9orf3-220ENST00000489318 ZNF343Q6P1L6 599 aa8.9□□□□□ -0.98
C9orf3-220ENST00000489318 TEX38Q6PEX7 206 aa8.9□□□□□ -0.98
C9orf3-220ENST00000489318 PATE2Q6UY27 113 aa8.9□□□□□ -0.98
C9orf3-220ENST00000489318 OR51G1Q8NGK1 321 aa8.9□□□□□ -0.98
C9orf3-220ENST00000489318 SFT2D1Q8WV19 159 aa8.9□□□□□ -0.98
C9orf3-220ENST00000489318 MARC2Q969Z3 335 aa8.9□□□□□ -0.98
C9orf3-220ENST00000489318 CHRDL1Q9BU40 450 aa8.9□□□□□ -0.98
C9orf3-220ENST00000489318 SCRT1Q9BWW7 348 aa8.9□□□□□ -0.98
C9orf3-220ENST00000489318 KLK15Q9H2R5 256 aa8.9□□□□□ -0.98
C9orf3-220ENST00000489318 C16orf95Q9H693 158 aa8.9□□□□□ -0.98
C9orf3-220ENST00000489318 A0A1W2PPV4 95 aa8.89□□□□□ -0.99
C9orf3-220ENST00000489318 OR2T8A6NH00 312 aa8.89□□□□□ -0.99
C9orf3-220ENST00000489318 NUPL2O15504 423 aaKnown RBP8.89□□□□□ -0.99
C9orf3-220ENST00000489318 COX7A2P2O60397 106 aa8.89□□□□□ -0.99
C9orf3-220ENST00000489318 NDUFA7O95182 113 aa8.89□□□□□ -0.99
C9orf3-220ENST00000489318 IGHV3-23P01764 117 aa8.89□□□□□ -0.99
C9orf3-220ENST00000489318 RD3LP0DJH9 198 aa8.89□□□□□ -0.99
C9orf3-220ENST00000489318 PF4V1P10720 104 aa8.89□□□□□ -0.99
C9orf3-220ENST00000489318 GPR183P32249 361 aa8.89□□□□□ -0.99
C9orf3-220ENST00000489318 FAM78BQ5VT40 261 aa8.89□□□□□ -0.99
C9orf3-220ENST00000489318 C10orf113Q5VZT2 155 aa8.89□□□□□ -0.99
C9orf3-220ENST00000489318 UQCC3Q6UW78 93 aa8.89□□□□□ -0.99
C9orf3-220ENST00000489318 LCN15Q6UWW0 184 aa8.89□□□□□ -0.99
C9orf3-220ENST00000489318 ZNF600Q6ZNG1 722 aa8.89□□□□□ -0.99
C9orf3-220ENST00000489318 ZNF491Q8N8L2 437 aa8.89□□□□□ -0.99
C9orf3-220ENST00000489318 RNF125Q96EQ8 232 aa8.89□□□□□ -0.99
C9orf3-220ENST00000489318 FAM210AQ96ND0 272 aa8.89□□□□□ -0.99
C9orf3-220ENST00000489318 DNAJC4Q9NNZ3 241 aa8.89□□□□□ -0.99
C9orf3-220ENST00000489318 MRPL27Q9P0M9 148 aaKnown RBP8.89□□□□□ -0.99
C9orf3-220ENST00000489318 CLEC3BP05452 202 aa8.88□□□□□ -0.99
C9orf3-220ENST00000489318 CCL20P78556 96 aa8.88□□□□□ -0.99
C9orf3-220ENST00000489318 SPATA31B1PQ5VZV4 182 aa8.88□□□□□ -0.99
C9orf3-220ENST00000489318 C10orf99Q6UWK7 81 aa8.88□□□□□ -0.99
C9orf3-220ENST00000489318 CLEC19AQ6UXS0 136 aa8.88□□□□□ -0.99
C9orf3-220ENST00000489318 Q71RC1 249 aaPredicted RBP8.88□□□□□ -0.99
C9orf3-220ENST00000489318 MIR17HGQ75NE6 70 aa8.88□□□□□ -0.99
C9orf3-220ENST00000489318 ZNF329Q86UD4 541 aa8.88□□□□□ -0.99
C9orf3-220ENST00000489318 Q8WTZ3 238 aa8.88□□□□□ -0.99
C9orf3-220ENST00000489318 ZFAND3Q9H8U3 227 aa8.88□□□□□ -0.99
C9orf3-220ENST00000489318 MTORP42345 2549 aa8.87□□□□□ -0.99
C9orf3-220ENST00000489318 NDUFS6O75380 124 aaKnown RBP8.87□□□□□ -0.99
C9orf3-220ENST00000489318 HYPMO75409 117 aa8.87□□□□□ -0.99
C9orf3-220ENST00000489318 CXorf1O96002 111 aa8.87□□□□□ -0.99
C9orf3-220ENST00000489318 IL4P05112 153 aa8.87□□□□□ -0.99
C9orf3-220ENST00000489318 CD5P06127 495 aa8.87□□□□□ -0.99
C9orf3-220ENST00000489318 C8orf88P0DMB2 117 aa8.87□□□□□ -0.99
C9orf3-220ENST00000489318 PSMB3P49720 205 aa8.87□□□□□ -0.99
C9orf3-220ENST00000489318 FGF8P55075 233 aaPredicted RBP8.87□□□□□ -0.99
C9orf3-220ENST00000489318 TAS2R45P59539 299 aa8.87□□□□□ -0.99
C9orf3-220ENST00000489318 RELQ04864 619 aaPredicted RBP8.87□□□□□ -0.99
C9orf3-220ENST00000489318 USF2Q15853 346 aaPredicted RBP8.87□□□□□ -0.99
C9orf3-220ENST00000489318 KHDC3LQ587J8 217 aa8.87□□□□□ -0.99
C9orf3-220ENST00000489318 MORN5Q5VZ52 161 aa8.87□□□□□ -0.99
C9orf3-220ENST00000489318 PQLC2Q6ZP29 291 aa8.87□□□□□ -0.99
C9orf3-220ENST00000489318 OR1B1Q8NGR6 318 aa8.87□□□□□ -0.99
C9orf3-220ENST00000489318 SUN5Q8TC36 379 aa8.87□□□□□ -0.99
C9orf3-220ENST00000489318 FAM167A-AS1Q96KT0 104 aa8.87□□□□□ -0.99
C9orf3-220ENST00000489318 UBE2E2Q96LR5 201 aa8.87□□□□□ -0.99
C9orf3-220ENST00000489318 SLC25A2Q9BXI2 301 aa8.87□□□□□ -0.99
C9orf3-220ENST00000489318 SMDT1Q9H4I9 107 aa8.87□□□□□ -0.99
C9orf3-220ENST00000489318 TECRQ9NZ01 308 aaKnown RBP8.87□□□□□ -0.99
C9orf3-220ENST00000489318 DOK5Q9P104 306 aa8.87□□□□□ -0.99
C9orf3-220ENST00000489318 HIGD1AQ9Y241 93 aa8.87□□□□□ -0.99
C9orf3-220ENST00000489318 ARL2-SNX15V9GYD0 113 aa8.87□□□□□ -0.99
C9orf3-220ENST00000489318 FN1P02751 2386 aaKnown RBP8.86□□□□□ -0.99
C9orf3-220ENST00000489318 LOC102723971A0A1B0GUV8 181 aa8.86□□□□□ -0.99
C9orf3-220ENST00000489318 H3BRN7 92 aa8.86□□□□□ -0.99
C9orf3-220ENST00000489318 HMGB3O15347 200 aaKnown RBP8.86□□□□□ -0.99
C9orf3-220ENST00000489318 TCF21O43680 179 aa8.86□□□□□ -0.99
C9orf3-220ENST00000489318 EIF3GO75821 320 aaKnown RBP eCLIP8.86□□□□□ -0.99
C9orf3-220ENST00000489318 RPLP1P05386 114 aaKnown RBP8.86□□□□□ -0.99
C9orf3-220ENST00000489318 ARL14EPLP0DKL9 152 aa8.86□□□□□ -0.99
C9orf3-220ENST00000489318 BCL2P10415 239 aa8.86□□□□□ -0.99
C9orf3-220ENST00000489318 ORM2P19652 201 aa8.86□□□□□ -0.99
C9orf3-220ENST00000489318 ARL3P36405 182 aa8.86□□□□□ -0.99
C9orf3-220ENST00000489318 TAGLN2P37802 199 aaKnown RBP8.86□□□□□ -0.99
C9orf3-220ENST00000489318 PPT1P50897 306 aa8.86□□□□□ -0.99
C9orf3-220ENST00000489318 LYZP61626 148 aa8.86□□□□□ -0.99
C9orf3-220ENST00000489318 ZNF506Q5JVG8 444 aa8.86□□□□□ -0.99
C9orf3-220ENST00000489318 LCNL1Q6ZST4 164 aa8.86□□□□□ -0.99
C9orf3-220ENST00000489318 LINC00305Q7Z4B0 112 aa8.86□□□□□ -0.99
C9orf3-220ENST00000489318 KLHDC1Q8N7A1 406 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms