RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 MED6O75586 246 aa18.35■□□□□ 0.53
HMGN1-217ENST00000489072 OR51G1Q8NGK1 321 aa18.35■□□□□ 0.53
HMGN1-217ENST00000489072 MPTX1A8MV57 137 aa18.34■□□□□ 0.53
HMGN1-217ENST00000489072 OR4E1P0C645 316 aa18.34■□□□□ 0.53
HMGN1-217ENST00000489072 RAB11AP62491 216 aa18.34■□□□□ 0.53
HMGN1-217ENST00000489072 ZNF90Q03938 601 aa18.34■□□□□ 0.53
HMGN1-217ENST00000489072 DHRS2Q13268 280 aa18.34■□□□□ 0.53
HMGN1-217ENST00000489072 C7orf50Q9BRJ6 194 aaKnown RBP18.34■□□□□ 0.53
HMGN1-217ENST00000489072 PAIP2BQ9ULR5 123 aaKnown RBP18.34■□□□□ 0.53
HMGN1-217ENST00000489072 PLECQ15149 4684 aaKnown RBP18.34■□□□□ 0.53
HMGN1-217ENST00000489072 HELTA6NFD8 242 aa18.33■□□□□ 0.52
HMGN1-217ENST00000489072 ZFP92A6NM28 416 aa18.33■□□□□ 0.52
HMGN1-217ENST00000489072 WRBO00258 174 aa18.33■□□□□ 0.52
HMGN1-217ENST00000489072 BUB3O43684 328 aa18.33■□□□□ 0.52
HMGN1-217ENST00000489072 ZNF688P0C7X2 276 aa18.33■□□□□ 0.52
HMGN1-217ENST00000489072 ANXA7P20073 488 aaKnown RBP18.33■□□□□ 0.52
HMGN1-217ENST00000489072 RNF125Q96EQ8 232 aa18.33■□□□□ 0.52
HMGN1-217ENST00000489072 CIB3Q96Q77 187 aaPredicted RBP18.33■□□□□ 0.52
HMGN1-217ENST00000489072 DNAH1Q9P2D7 4330 aa18.32■□□□□ 0.52
HMGN1-217ENST00000489072 CENPXA8MT69 81 aa18.32■□□□□ 0.52
HMGN1-217ENST00000489072 PRSS46E5RG02 174 aa18.32■□□□□ 0.52
HMGN1-217ENST00000489072 IGKV1OR2-108A0A075B7D4 117 aa18.31■□□□□ 0.52
HMGN1-217ENST00000489072 PLA2G10O15496 165 aa18.31■□□□□ 0.52
HMGN1-217ENST00000489072 EIF2B2P49770 351 aaKnown RBP18.31■□□□□ 0.52
HMGN1-217ENST00000489072 COQ8AQ8NI60 647 aa18.31■□□□□ 0.52
HMGN1-217ENST00000489072 PBDC1Q9BVG4 233 aa18.31■□□□□ 0.52
HMGN1-217ENST00000489072 CA1P00915 261 aaPredicted RBP18.3■□□□□ 0.52
HMGN1-217ENST00000489072 ID3Q02535 119 aa18.3■□□□□ 0.52
HMGN1-217ENST00000489072 GATAD1Q8WUU5 269 aa18.3■□□□□ 0.52
HMGN1-217ENST00000489072 KNCNA6PVL3 124 aa18.29■□□□□ 0.52
HMGN1-217ENST00000489072 H3BP45 60 aa18.29■□□□□ 0.52
HMGN1-217ENST00000489072 AP2S1P53680 142 aaPredicted RBP18.29■□□□□ 0.52
HMGN1-217ENST00000489072 C4orf46Q504U0 113 aa18.29■□□□□ 0.52
HMGN1-217ENST00000489072 SPANXN5Q5MJ07 72 aa18.29■□□□□ 0.52
HMGN1-217ENST00000489072 SIGLEC15Q6ZMC9 328 aa18.29■□□□□ 0.52
HMGN1-217ENST00000489072 TRPT1Q86TN4 253 aaKnown RBP18.29■□□□□ 0.52
HMGN1-217ENST00000489072 STHQ8IWL8 128 aa18.29■□□□□ 0.52
HMGN1-217ENST00000489072 THAP8Q8NA92 274 aa18.29■□□□□ 0.52
HMGN1-217ENST00000489072 OR4D5Q8NGN0 318 aa18.29■□□□□ 0.52
HMGN1-217ENST00000489072 TRGV9Q99603 122 aa18.29■□□□□ 0.52
HMGN1-217ENST00000489072 POLR2GP62487 172 aaKnown RBP eCLIP18.28■□□□□ 0.52
HMGN1-217ENST00000489072 RPP30P78346 268 aaKnown RBP18.28■□□□□ 0.52
HMGN1-217ENST00000489072 OR2F1Q13607 317 aa18.28■□□□□ 0.52
HMGN1-217ENST00000489072 OR8G2PQ6IF36 304 aa18.28■□□□□ 0.52
HMGN1-217ENST00000489072 ALMS1Q8TCU4 4167 aa18.27■□□□□ 0.52
HMGN1-217ENST00000489072 GIG44P09565 113 aaPredicted RBP18.27■□□□□ 0.52
HMGN1-217ENST00000489072 LYZP61626 148 aa18.27■□□□□ 0.52
HMGN1-217ENST00000489072 RARRES2Q99969 163 aa18.27■□□□□ 0.52
HMGN1-217ENST00000489072 NRN1Q9NPD7 142 aa18.27■□□□□ 0.52
HMGN1-217ENST00000489072 LYRM1O43325 122 aa18.26■□□□□ 0.51
HMGN1-217ENST00000489072 IFNA21P01568 189 aa18.26■□□□□ 0.51
HMGN1-217ENST00000489072 FABP1P07148 127 aa18.26■□□□□ 0.51
HMGN1-217ENST00000489072 PMS2P11Q13670 270 aa18.26■□□□□ 0.51
HMGN1-217ENST00000489072 PSMG4Q5JS54 123 aa18.26■□□□□ 0.51
HMGN1-217ENST00000489072 C20orf85Q9H1P6 137 aa18.26■□□□□ 0.51
HMGN1-217ENST00000489072 STRAPQ9Y3F4 350 aaKnown RBP18.26■□□□□ 0.51
HMGN1-217ENST00000489072 ATF4P18848 351 aaPredicted RBP18.25■□□□□ 0.51
HMGN1-217ENST00000489072 NKX2-1P43699 371 aaPredicted RBP18.25■□□□□ 0.51
HMGN1-217ENST00000489072 ACTL10Q5JWF8 245 aa18.25■□□□□ 0.51
HMGN1-217ENST00000489072 OR11H2Q8NH07 326 aa18.25■□□□□ 0.51
HMGN1-217ENST00000489072 HYDINQ4G0P3 5121 aa18.25■□□□□ 0.51
HMGN1-217ENST00000489072 CXorf65A6NEN9 183 aa18.24■□□□□ 0.51
HMGN1-217ENST00000489072 SNRPGP15A8MWD9 76 aa18.24■□□□□ 0.51
HMGN1-217ENST00000489072 NUP62P37198 522 aaPredicted RBP18.24■□□□□ 0.51
HMGN1-217ENST00000489072 CNPY1Q3B7I2 92 aa18.24■□□□□ 0.51
HMGN1-217ENST00000489072 MITD1Q8WV92 249 aa18.24■□□□□ 0.51
HMGN1-217ENST00000489072 RAB40CQ96S21 281 aa18.24■□□□□ 0.51
HMGN1-217ENST00000489072 SSSCA1O60232 199 aa18.23■□□□□ 0.51
HMGN1-217ENST00000489072 C4BPBP20851 252 aa18.23■□□□□ 0.51
HMGN1-217ENST00000489072 ACOT7LQ6ZUV0 252 aa18.23■□□□□ 0.51
HMGN1-217ENST00000489072 PSENENQ9NZ42 101 aa18.23■□□□□ 0.51
HMGN1-217ENST00000489072 PAX9P55771 341 aa18.22■□□□□ 0.51
HMGN1-217ENST00000489072 IAH1Q2TAA2 248 aaPredicted RBP18.22■□□□□ 0.51
HMGN1-217ENST00000489072 TMEM182Q6ZP80 229 aaPredicted RBP18.22■□□□□ 0.51
HMGN1-217ENST00000489072 SEPSECSQ9HD40 501 aaKnown RBP18.22■□□□□ 0.51
HMGN1-217ENST00000489072 PFDN2Q9UHV9 154 aa18.22■□□□□ 0.51
HMGN1-217ENST00000489072 PMS2P5A8MQ11 134 aa18.21■□□□□ 0.51
HMGN1-217ENST00000489072 JTBO76095 146 aa18.21■□□□□ 0.51
HMGN1-217ENST00000489072 TCRBP04435 133 aa18.21■□□□□ 0.51
HMGN1-217ENST00000489072 SPP1P10451 314 aa18.21■□□□□ 0.51
HMGN1-217ENST00000489072 GATA2P23769 480 aaPredicted RBP18.21■□□□□ 0.51
HMGN1-217ENST00000489072 SNRPD3P62318 126 aaKnown RBP18.21■□□□□ 0.51
HMGN1-217ENST00000489072 MORN3Q6PF18 240 aaPredicted RBP18.21■□□□□ 0.51
HMGN1-217ENST00000489072 TMEM217Q8N7C4 229 aa18.21■□□□□ 0.51
HMGN1-217ENST00000489072 ZBTB8BQ8NAP8 495 aaPredicted RBP18.21■□□□□ 0.51
HMGN1-217ENST00000489072 SMIM8Q96KF7 97 aa18.21■□□□□ 0.51
HMGN1-217ENST00000489072 WDR12Q9GZL7 423 aaKnown RBP18.21■□□□□ 0.51
HMGN1-217ENST00000489072 CCNKO75909 580 aa18.2■□□□□ 0.5
HMGN1-217ENST00000489072 SCGB1D2O95969 90 aa18.2■□□□□ 0.5
HMGN1-217ENST00000489072 AKR1C1Q04828 323 aa18.2■□□□□ 0.5
HMGN1-217ENST00000489072 C1orf194Q5T5A4 169 aa18.2■□□□□ 0.5
HMGN1-217ENST00000489072 GSG1LQ6UXU4 331 aa18.2■□□□□ 0.5
HMGN1-217ENST00000489072 CCDC32Q9BV29 185 aa18.2■□□□□ 0.5
HMGN1-217ENST00000489072 C11orf68Q9H3H3 251 aaKnown RBP18.2■□□□□ 0.5
HMGN1-217ENST00000489072 TRAV6A0A075B6T7 132 aa18.19■□□□□ 0.5
HMGN1-217ENST00000489072 PPP1R14BQ96C90 147 aa18.19■□□□□ 0.5
HMGN1-217ENST00000489072 GSKIPQ9P0R6 139 aa18.19■□□□□ 0.5
HMGN1-217ENST00000489072 FBXL17Q9UF56 701 aa18.19■□□□□ 0.5
HMGN1-217ENST00000489072 RCL1Q9Y2P8 373 aaKnown RBP18.19■□□□□ 0.5
HMGN1-217ENST00000489072 CCSO14618 274 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms