RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 INSIG2Q9Y5U4 225 aa13.17□□□□□ -0.3
MCF2L-229ENST00000488765 MRPL33O75394 65 aaKnown RBP13.17□□□□□ -0.3
MCF2L-229ENST00000488765 OR13A1Q8NGR1 328 aa13.17□□□□□ -0.3
MCF2L-229ENST00000488765 PRSS3P2Q8NHM4 247 aa13.17□□□□□ -0.3
MCF2L-229ENST00000488765 GRAMD2BQ96HH9 432 aa13.17□□□□□ -0.3
MCF2L-229ENST00000488765 ADTRPQ96IZ2 230 aa13.17□□□□□ -0.3
MCF2L-229ENST00000488765 CYC1P08574 325 aa13.17□□□□□ -0.3
MCF2L-229ENST00000488765 LIFP15018 202 aa13.17□□□□□ -0.3
MCF2L-229ENST00000488765 GPR12P47775 334 aa13.17□□□□□ -0.3
MCF2L-229ENST00000488765 SSR4P51571 173 aa13.17□□□□□ -0.3
MCF2L-229ENST00000488765 C3AR1Q16581 482 aa13.17□□□□□ -0.3
MCF2L-229ENST00000488765 SHISA2Q6UWI4 295 aa13.17□□□□□ -0.3
MCF2L-229ENST00000488765 FAM222BQ8WU58 562 aa13.17□□□□□ -0.3
MCF2L-229ENST00000488765 FAM173AQ9BQD7 235 aa13.17□□□□□ -0.3
MCF2L-229ENST00000488765 PRO3102Q9H379 93 aa13.17□□□□□ -0.3
MCF2L-229ENST00000488765 DMXL2Q8TDJ6 3036 aa13.16□□□□□ -0.3
MCF2L-229ENST00000488765 CEP295Q9C0D2 2601 aa13.16□□□□□ -0.3
MCF2L-229ENST00000488765 IGLV3-12A0A075B6K2 115 aa13.16□□□□□ -0.3
MCF2L-229ENST00000488765 ZNF716A6NP11 495 aa13.16□□□□□ -0.3
MCF2L-229ENST00000488765 VDAC2P45880 294 aaPredicted RBP13.16□□□□□ -0.3
MCF2L-229ENST00000488765 TACC2O95359 2948 aa13.16□□□□□ -0.3
MCF2L-229ENST00000488765 TRAV8-1A0A0A6YYK1 113 aa13.16□□□□□ -0.3
MCF2L-229ENST00000488765 PRSS46E5RG02 174 aa13.16□□□□□ -0.3
MCF2L-229ENST00000488765 PET117Q6UWS5 81 aa13.16□□□□□ -0.3
MCF2L-229ENST00000488765 HES7Q9BYE0 225 aa13.16□□□□□ -0.3
MCF2L-229ENST00000488765 MBNL3Q9NUK0 354 aaKnown RBP13.16□□□□□ -0.3
MCF2L-229ENST00000488765 KBTBD11-OT1A0A1B0GTJ5 212 aa13.15□□□□□ -0.3
MCF2L-229ENST00000488765 LTAP01374 205 aa13.15□□□□□ -0.3
MCF2L-229ENST00000488765 FTH1P19P0C7X4 201 aa13.15□□□□□ -0.3
MCF2L-229ENST00000488765 FGF6P10767 208 aa13.15□□□□□ -0.3
MCF2L-229ENST00000488765 SSBP2P81877 361 aaPredicted RBP13.15□□□□□ -0.3
MCF2L-229ENST00000488765 MRPL14Q6P1L8 145 aaKnown RBP13.15□□□□□ -0.3
MCF2L-229ENST00000488765 BCL6BQ8N143 479 aaPredicted RBP13.15□□□□□ -0.3
MCF2L-229ENST00000488765 PRDM14Q9GZV8 571 aa13.15□□□□□ -0.3
MCF2L-229ENST00000488765 SP9P0CG40 484 aa13.15□□□□□ -0.3
MCF2L-229ENST00000488765 RAC3P60763 192 aa13.15□□□□□ -0.3
MCF2L-229ENST00000488765 ERVK-16P61578 105 aa13.15□□□□□ -0.3
MCF2L-229ENST00000488765 FLYWCH2Q96CP2 140 aaKnown RBP13.15□□□□□ -0.3
MCF2L-229ENST00000488765 TAAR6Q96RI8 345 aa13.15□□□□□ -0.3
MCF2L-229ENST00000488765 MS4A6AQ9H2W1 248 aa13.15□□□□□ -0.3
MCF2L-229ENST00000488765 ENY2Q9NPA8 101 aa13.15□□□□□ -0.3
MCF2L-229ENST00000488765 TRBV6-6A0A0A6YYG2 114 aa13.15□□□□□ -0.31
MCF2L-229ENST00000488765 AP5S1Q9NUS5 200 aa13.15□□□□□ -0.31
MCF2L-229ENST00000488765 IGHV1-45A0A0A0MS14 117 aa13.14□□□□□ -0.31
MCF2L-229ENST00000488765 FCER1GP30273 86 aa13.14□□□□□ -0.31
MCF2L-229ENST00000488765 FAM169BQ8N8A8 192 aa13.14□□□□□ -0.31
MCF2L-229ENST00000488765 MGST3O14880 152 aa13.14□□□□□ -0.31
MCF2L-229ENST00000488765 SMIM13P0DJ93 91 aa13.14□□□□□ -0.31
MCF2L-229ENST00000488765 COX6A1P12074 109 aa13.14□□□□□ -0.31
MCF2L-229ENST00000488765 PPP1R32Q7Z5V6 425 aa13.14□□□□□ -0.31
MCF2L-229ENST00000488765 TUSC5Q8IXB3 177 aa13.14□□□□□ -0.31
MCF2L-229ENST00000488765 C12orf49Q9H741 205 aa13.14□□□□□ -0.31
MCF2L-229ENST00000488765 LOXL2Q9Y4K0 774 aa13.14□□□□□ -0.31
MCF2L-229ENST00000488765 ZGRF1Q86YA3 2104 aa13.13□□□□□ -0.31
MCF2L-229ENST00000488765 OTOGLQ3ZCN5 2332 aa13.13□□□□□ -0.31
MCF2L-229ENST00000488765 OR2J3O76001 311 aa13.13□□□□□ -0.31
MCF2L-229ENST00000488765 DSCR4P56555 118 aaPredicted RBP13.13□□□□□ -0.31
MCF2L-229ENST00000488765 OR5A1Q8NGJ0 315 aa13.13□□□□□ -0.31
MCF2L-229ENST00000488765 ZNF747Q9BV97 191 aa13.13□□□□□ -0.31
MCF2L-229ENST00000488765 AGRNO00468 2067 aa13.13□□□□□ -0.31
MCF2L-229ENST00000488765 IGLV3-32A0A0A0MS00 114 aa13.13□□□□□ -0.31
MCF2L-229ENST00000488765 SLC25A5P05141 298 aaKnown RBP13.13□□□□□ -0.31
MCF2L-229ENST00000488765 IFI27P40305 119 aaPredicted RBP13.13□□□□□ -0.31
MCF2L-229ENST00000488765 TAS2R45P59539 299 aa13.13□□□□□ -0.31
MCF2L-229ENST00000488765 PRR20EP86478 221 aa13.13□□□□□ -0.31
MCF2L-229ENST00000488765 PRR20CP86479 221 aa13.13□□□□□ -0.31
MCF2L-229ENST00000488765 PRR20DP86480 221 aa13.13□□□□□ -0.31
MCF2L-229ENST00000488765 PRR20BP86481 221 aa13.13□□□□□ -0.31
MCF2L-229ENST00000488765 PRR20AP86496 221 aa13.13□□□□□ -0.31
MCF2L-229ENST00000488765 LINC01545Q5VT33 79 aa13.13□□□□□ -0.31
MCF2L-229ENST00000488765 PIP4P2Q8N4L2 257 aa13.13□□□□□ -0.31
MCF2L-229ENST00000488765 NPIPB11E5RHQ5 1161 aa13.13□□□□□ -0.31
MCF2L-229ENST00000488765 FAM87AP0C7U9 286 aa13.13□□□□□ -0.31
MCF2L-229ENST00000488765 OR1C1Q15619 314 aa13.13□□□□□ -0.31
MCF2L-229ENST00000488765 COLCA1Q6ZS62 124 aa13.13□□□□□ -0.31
MCF2L-229ENST00000488765 FNDC10F2Z333 226 aa13.12□□□□□ -0.31
MCF2L-229ENST00000488765 PEX7O00628 323 aa13.12□□□□□ -0.31
MCF2L-229ENST00000488765 KRTAP27-1Q3LI81 207 aa13.12□□□□□ -0.31
MCF2L-229ENST00000488765 ATP1A1-AS1Q5TC04 95 aa13.12□□□□□ -0.31
MCF2L-229ENST00000488765 C1orf229Q6ZS94 237 aaPredicted RBP13.12□□□□□ -0.31
MCF2L-229ENST00000488765 RNF183Q96D59 192 aa13.12□□□□□ -0.31
MCF2L-229ENST00000488765 POLDIP2Q9Y2S7 368 aa13.12□□□□□ -0.31
MCF2L-229ENST00000488765 DUTP33316 252 aaKnown RBP13.12□□□□□ -0.31
MCF2L-229ENST00000488765 IL11RAQ14626 422 aa13.12□□□□□ -0.31
MCF2L-229ENST00000488765 FA2HQ7L5A8 372 aa13.12□□□□□ -0.31
MCF2L-229ENST00000488765 WIPF2Q8TF74 440 aaPredicted RBP13.12□□□□□ -0.31
MCF2L-229ENST00000488765 VGLL1Q99990 258 aa13.12□□□□□ -0.31
MCF2L-229ENST00000488765 A0A1W2PRD5 423 aa13.11□□□□□ -0.31
MCF2L-229ENST00000488765 A0A1W2PRF3 423 aa13.11□□□□□ -0.31
MCF2L-229ENST00000488765 A0A1W2PRM7 423 aa13.11□□□□□ -0.31
MCF2L-229ENST00000488765 TMEM30CPA0ZSE6 113 aa13.11□□□□□ -0.31
MCF2L-229ENST00000488765 P01737 135 aa13.11□□□□□ -0.31
MCF2L-229ENST00000488765 COQ2Q96H96 371 aa13.11□□□□□ -0.31
MCF2L-229ENST00000488765 DKK2Q9UBU2 259 aa13.11□□□□□ -0.31
MCF2L-229ENST00000488765 TEX50A0A1B0GTY4 177 aa13.11□□□□□ -0.31
MCF2L-229ENST00000488765 PGPA6NDG6 321 aa13.11□□□□□ -0.31
MCF2L-229ENST00000488765 SPINT2O43291 252 aa13.11□□□□□ -0.31
MCF2L-229ENST00000488765 MOSP00540 346 aa13.11□□□□□ -0.31
MCF2L-229ENST00000488765 C8orf88P0DMB2 117 aa13.11□□□□□ -0.31
MCF2L-229ENST00000488765 CHCHD1Q96BP2 118 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms