RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 ANXA7P20073 488 aaKnown RBP13.05□□□□□ -0.32
ITGB1-215ENST00000488494 GPX4P36969 197 aaPredicted RBP13.05□□□□□ -0.32
ITGB1-215ENST00000488494 RAB11AP62491 216 aa13.05□□□□□ -0.32
ITGB1-215ENST00000488494 DHRS2Q13268 280 aa13.05□□□□□ -0.32
ITGB1-215ENST00000488494 C16orf54Q6UWD8 224 aa13.05□□□□□ -0.32
ITGB1-215ENST00000488494 DCANP1Q8TF63 244 aa13.05□□□□□ -0.32
ITGB1-215ENST00000488494 CIB3Q96Q77 187 aaPredicted RBP13.05□□□□□ -0.32
ITGB1-215ENST00000488494 PBDC1Q9BVG4 233 aa13.05□□□□□ -0.32
ITGB1-215ENST00000488494 CSTL1Q9H114 145 aa13.05□□□□□ -0.32
ITGB1-215ENST00000488494 NDUFA13Q9P0J0 144 aa13.05□□□□□ -0.32
ITGB1-215ENST00000488494 IGKV1D-37A0A075B6S9 117 aa13.04□□□□□ -0.32
ITGB1-215ENST00000488494 WRBO00258 174 aa13.04□□□□□ -0.32
ITGB1-215ENST00000488494 SYNGR2O43760 224 aa13.04□□□□□ -0.32
ITGB1-215ENST00000488494 CA1P00915 261 aaPredicted RBP13.04□□□□□ -0.32
ITGB1-215ENST00000488494 OR4E1P0C645 316 aa13.04□□□□□ -0.32
ITGB1-215ENST00000488494 EWSR1Q01844 656 aaKnown RBP eCLIP13.04□□□□□ -0.32
ITGB1-215ENST00000488494 ZNF90Q03938 601 aa13.04□□□□□ -0.32
ITGB1-215ENST00000488494 C4orf46Q504U0 113 aa13.04□□□□□ -0.32
ITGB1-215ENST00000488494 COQ8AQ8NI60 647 aa13.04□□□□□ -0.32
ITGB1-215ENST00000488494 RNF125Q96EQ8 232 aa13.04□□□□□ -0.32
ITGB1-215ENST00000488494 C7orf50Q9BRJ6 194 aaKnown RBP13.04□□□□□ -0.32
ITGB1-215ENST00000488494 H3BP45 60 aa13.03□□□□□ -0.32
ITGB1-215ENST00000488494 KNCNA6PVL3 124 aa13.02□□□□□ -0.33
ITGB1-215ENST00000488494 FABP1P07148 127 aa13.02□□□□□ -0.33
ITGB1-215ENST00000488494 LYZP61626 148 aa13.02□□□□□ -0.33
ITGB1-215ENST00000488494 RPP30P78346 268 aaKnown RBP13.02□□□□□ -0.33
ITGB1-215ENST00000488494 PMS2P11Q13670 270 aa13.02□□□□□ -0.33
ITGB1-215ENST00000488494 STHQ8IWL8 128 aa13.02□□□□□ -0.33
ITGB1-215ENST00000488494 PLECQ15149 4684 aaKnown RBP13.01□□□□□ -0.33
ITGB1-215ENST00000488494 CXorf65A6NEN9 183 aa13.01□□□□□ -0.33
ITGB1-215ENST00000488494 PRSS46E5RG02 174 aa13.01□□□□□ -0.33
ITGB1-215ENST00000488494 BUB3O43684 328 aa13.01□□□□□ -0.33
ITGB1-215ENST00000488494 NUP62P37198 522 aaPredicted RBP13.01□□□□□ -0.33
ITGB1-215ENST00000488494 OR2F1Q13607 317 aa13.01□□□□□ -0.33
ITGB1-215ENST00000488494 PSMG4Q5JS54 123 aa13.01□□□□□ -0.33
ITGB1-215ENST00000488494 SPANXN5Q5MJ07 72 aa13.01□□□□□ -0.33
ITGB1-215ENST00000488494 OR8G2PQ6IF36 304 aa13.01□□□□□ -0.33
ITGB1-215ENST00000488494 SIGLEC15Q6ZMC9 328 aa13.01□□□□□ -0.33
ITGB1-215ENST00000488494 GATAD1Q8WUU5 269 aa13.01□□□□□ -0.33
ITGB1-215ENST00000488494 C20orf85Q9H1P6 137 aa13.01□□□□□ -0.33
ITGB1-215ENST00000488494 NRN1Q9NPD7 142 aa13.01□□□□□ -0.33
ITGB1-215ENST00000488494 IGKV1OR2-108A0A075B7D4 117 aa13□□□□□ -0.33
ITGB1-215ENST00000488494 SSSCA1O60232 199 aa13□□□□□ -0.33
ITGB1-215ENST00000488494 IFNA21P01568 189 aa13□□□□□ -0.33
ITGB1-215ENST00000488494 AP2S1P53680 142 aaPredicted RBP13□□□□□ -0.33
ITGB1-215ENST00000488494 POLR2GP62487 172 aaKnown RBP eCLIP13□□□□□ -0.33
ITGB1-215ENST00000488494 ACTL10Q5JWF8 245 aa13□□□□□ -0.33
ITGB1-215ENST00000488494 ACOT7LQ6ZUV0 252 aa13□□□□□ -0.33
ITGB1-215ENST00000488494 TRPT1Q86TN4 253 aaKnown RBP13□□□□□ -0.33
ITGB1-215ENST00000488494 THAP8Q8NA92 274 aa13□□□□□ -0.33
ITGB1-215ENST00000488494 TRGV9Q99603 122 aa13□□□□□ -0.33
ITGB1-215ENST00000488494 STRAPQ9Y3F4 350 aaKnown RBP13□□□□□ -0.33
ITGB1-215ENST00000488494 PLA2G10O15496 165 aa12.99□□□□□ -0.33
ITGB1-215ENST00000488494 LYRM1O43325 122 aa12.99□□□□□ -0.33
ITGB1-215ENST00000488494 JTBO76095 146 aa12.99□□□□□ -0.33
ITGB1-215ENST00000488494 TMEM217Q8N7C4 229 aa12.99□□□□□ -0.33
ITGB1-215ENST00000488494 OR4D5Q8NGN0 318 aa12.99□□□□□ -0.33
ITGB1-215ENST00000488494 RARRES2Q99969 163 aa12.99□□□□□ -0.33
ITGB1-215ENST00000488494 ALMS1Q8TCU4 4167 aa12.99□□□□□ -0.33
ITGB1-215ENST00000488494 SCGB1D2O95969 90 aa12.98□□□□□ -0.33
ITGB1-215ENST00000488494 C4BPBP20851 252 aa12.98□□□□□ -0.33
ITGB1-215ENST00000488494 NKX2-1P43699 371 aaPredicted RBP12.98□□□□□ -0.33
ITGB1-215ENST00000488494 SNRPD3P62318 126 aaKnown RBP12.98□□□□□ -0.33
ITGB1-215ENST00000488494 ID3Q02535 119 aa12.98□□□□□ -0.33
ITGB1-215ENST00000488494 AKR1C1Q04828 323 aa12.98□□□□□ -0.33
ITGB1-215ENST00000488494 IAH1Q2TAA2 248 aaPredicted RBP12.98□□□□□ -0.33
ITGB1-215ENST00000488494 OR11H2Q8NH07 326 aa12.98□□□□□ -0.33
ITGB1-215ENST00000488494 PFDN2Q9UHV9 154 aa12.98□□□□□ -0.33
ITGB1-215ENST00000488494 SNRPGP15A8MWD9 76 aa12.97□□□□□ -0.33
ITGB1-215ENST00000488494 MITD1Q8WV92 249 aa12.97□□□□□ -0.33
ITGB1-215ENST00000488494 PPP1R14BQ96C90 147 aa12.97□□□□□ -0.33
ITGB1-215ENST00000488494 PSENENQ9NZ42 101 aa12.97□□□□□ -0.33
ITGB1-215ENST00000488494 SMCO3A2RU48 225 aa12.96□□□□□ -0.33
ITGB1-215ENST00000488494 GIG44P09565 113 aaPredicted RBP12.96□□□□□ -0.33
ITGB1-215ENST00000488494 SPP1P10451 314 aa12.96□□□□□ -0.33
ITGB1-215ENST00000488494 ATF4P18848 351 aaPredicted RBP12.96□□□□□ -0.33
ITGB1-215ENST00000488494 CNPY1Q3B7I2 92 aa12.96□□□□□ -0.33
ITGB1-215ENST00000488494 MORN3Q6PF18 240 aaPredicted RBP12.96□□□□□ -0.33
ITGB1-215ENST00000488494 RAB40CQ96S21 281 aa12.96□□□□□ -0.33
ITGB1-215ENST00000488494 CCDC32Q9BV29 185 aa12.96□□□□□ -0.33
ITGB1-215ENST00000488494 C11orf68Q9H3H3 251 aaKnown RBP12.96□□□□□ -0.33
ITGB1-215ENST00000488494 NUDT15Q9NV35 164 aa12.96□□□□□ -0.33
ITGB1-215ENST00000488494 HYDINQ4G0P3 5121 aa12.96□□□□□ -0.34
ITGB1-215ENST00000488494 TRAV6A0A075B6T7 132 aa12.95□□□□□ -0.34
ITGB1-215ENST00000488494 NUPR2A6NF83 97 aa12.95□□□□□ -0.34
ITGB1-215ENST00000488494 C1orf194Q5T5A4 169 aa12.95□□□□□ -0.34
ITGB1-215ENST00000488494 ZBTB8BQ8NAP8 495 aaPredicted RBP12.95□□□□□ -0.34
ITGB1-215ENST00000488494 FBXL17Q9UF56 701 aa12.95□□□□□ -0.34
ITGB1-215ENST00000488494 DNAH1Q9P2D7 4330 aa12.94□□□□□ -0.34
ITGB1-215ENST00000488494 CCSO14618 274 aa12.94□□□□□ -0.34
ITGB1-215ENST00000488494 DEFB4AO15263 64 aa12.94□□□□□ -0.34
ITGB1-215ENST00000488494 TCRBP04435 133 aa12.94□□□□□ -0.34
ITGB1-215ENST00000488494 BPIFCQ8NFQ6 507 aa12.94□□□□□ -0.34
ITGB1-215ENST00000488494 WDR12Q9GZL7 423 aaKnown RBP12.94□□□□□ -0.34
ITGB1-215ENST00000488494 SEPSECSQ9HD40 501 aaKnown RBP12.94□□□□□ -0.34
ITGB1-215ENST00000488494 GSKIPQ9P0R6 139 aa12.94□□□□□ -0.34
ITGB1-215ENST00000488494 RCL1Q9Y2P8 373 aaKnown RBP12.94□□□□□ -0.34
ITGB1-215ENST00000488494 CCNKO75909 580 aa12.93□□□□□ -0.34
ITGB1-215ENST00000488494 CFDP00746 253 aaPredicted RBP12.93□□□□□ -0.34
ITGB1-215ENST00000488494 GATA2P23769 480 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms