RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 K7EQG2 157 aa17.5■□□□□ 0.39
RNF38-208ENST00000488058 ZNF90Q03938 601 aa17.5■□□□□ 0.39
RNF38-208ENST00000488058 C16orf54Q6UWD8 224 aa17.5■□□□□ 0.39
RNF38-208ENST00000488058 RNF125Q96EQ8 232 aa17.5■□□□□ 0.39
RNF38-208ENST00000488058 C20orf85Q9H1P6 137 aa17.5■□□□□ 0.39
RNF38-208ENST00000488058 KMT2CQ8NEZ4 4911 aaKnown RBP17.5■□□□□ 0.39
RNF38-208ENST00000488058 HELTA6NFD8 242 aa17.49■□□□□ 0.39
RNF38-208ENST00000488058 ZNF688P0C7X2 276 aa17.49■□□□□ 0.39
RNF38-208ENST00000488058 POLR2GP62487 172 aaKnown RBP eCLIP17.49■□□□□ 0.39
RNF38-208ENST00000488058 CNPY1Q3B7I2 92 aa17.49■□□□□ 0.39
RNF38-208ENST00000488058 IL17DQ8TAD2 202 aa17.49■□□□□ 0.39
RNF38-208ENST00000488058 GLMPQ8WWB7 406 aa17.49■□□□□ 0.39
RNF38-208ENST00000488058 TP53TG1Q9Y2A0 90 aa17.49■□□□□ 0.39
RNF38-208ENST00000488058 IGKV1D-37A0A075B6S9 117 aa17.48■□□□□ 0.39
RNF38-208ENST00000488058 SCGB1D2O95969 90 aa17.48■□□□□ 0.39
RNF38-208ENST00000488058 FABP1P07148 127 aa17.48■□□□□ 0.39
RNF38-208ENST00000488058 NKX2-1P43699 371 aaPredicted RBP17.48■□□□□ 0.39
RNF38-208ENST00000488058 LYZP61626 148 aa17.48■□□□□ 0.39
RNF38-208ENST00000488058 OR2F1Q13607 317 aa17.48■□□□□ 0.39
RNF38-208ENST00000488058 CSTL1Q9H114 145 aa17.48■□□□□ 0.39
RNF38-208ENST00000488058 STRAPQ9Y3F4 350 aaKnown RBP17.48■□□□□ 0.39
RNF38-208ENST00000488058 DNAH7Q8WXX0 4024 aa17.47■□□□□ 0.39
RNF38-208ENST00000488058 TRAV6A0A075B6T7 132 aa17.47■□□□□ 0.39
RNF38-208ENST00000488058 RNF183Q96D59 192 aa17.47■□□□□ 0.39
RNF38-208ENST00000488058 SSSCA1O60232 199 aa17.46■□□□□ 0.39
RNF38-208ENST00000488058 TCRBP04435 133 aa17.46■□□□□ 0.39
RNF38-208ENST00000488058 AP2S1P53680 142 aaPredicted RBP17.46■□□□□ 0.39
RNF38-208ENST00000488058 ID3Q02535 119 aa17.46■□□□□ 0.39
RNF38-208ENST00000488058 IAH1Q2TAA2 248 aaPredicted RBP17.46■□□□□ 0.39
RNF38-208ENST00000488058 STHQ8IWL8 128 aa17.46■□□□□ 0.39
RNF38-208ENST00000488058 OR4D5Q8NGN0 318 aa17.46■□□□□ 0.39
RNF38-208ENST00000488058 CCDC32Q9BV29 185 aa17.46■□□□□ 0.39
RNF38-208ENST00000488058 PSENENQ9NZ42 101 aa17.46■□□□□ 0.39
RNF38-208ENST00000488058 A0A0J9YWU9 116 aa17.45■□□□□ 0.38
RNF38-208ENST00000488058 BUB3O43684 328 aa17.45■□□□□ 0.38
RNF38-208ENST00000488058 AKR1C1Q04828 323 aa17.45■□□□□ 0.38
RNF38-208ENST00000488058 SIGLEC15Q6ZMC9 328 aa17.45■□□□□ 0.38
RNF38-208ENST00000488058 DCANP1Q8TF63 244 aa17.45■□□□□ 0.38
RNF38-208ENST00000488058 MITD1Q8WV92 249 aa17.45■□□□□ 0.38
RNF38-208ENST00000488058 TRGV9Q99603 122 aa17.45■□□□□ 0.38
RNF38-208ENST00000488058 GSKIPQ9P0R6 139 aa17.45■□□□□ 0.38
RNF38-208ENST00000488058 SNRPGP15A8MWD9 76 aa17.44■□□□□ 0.38
RNF38-208ENST00000488058 NUP62P37198 522 aaPredicted RBP17.44■□□□□ 0.38
RNF38-208ENST00000488058 OR8G2PQ6IF36 304 aa17.44■□□□□ 0.38
RNF38-208ENST00000488058 PPP1R14BQ96C90 147 aa17.44■□□□□ 0.38
RNF38-208ENST00000488058 NUDT15Q9NV35 164 aa17.44■□□□□ 0.38
RNF38-208ENST00000488058 PFDN2Q9UHV9 154 aa17.44■□□□□ 0.38
RNF38-208ENST00000488058 IGKV1OR2-108A0A075B7D4 117 aa17.43■□□□□ 0.38
RNF38-208ENST00000488058 KNCNA6PVL3 124 aa17.43■□□□□ 0.38
RNF38-208ENST00000488058 PRSS46E5RG02 174 aa17.43■□□□□ 0.38
RNF38-208ENST00000488058 CA1P00915 261 aaPredicted RBP17.43■□□□□ 0.38
RNF38-208ENST00000488058 PSMG4Q5JS54 123 aa17.43■□□□□ 0.38
RNF38-208ENST00000488058 ACOT7LQ6ZUV0 252 aa17.43■□□□□ 0.38
RNF38-208ENST00000488058 THAP8Q8NA92 274 aa17.43■□□□□ 0.38
RNF38-208ENST00000488058 ZBTB8BQ8NAP8 495 aaPredicted RBP17.43■□□□□ 0.38
RNF38-208ENST00000488058 S100ZQ8WXG8 99 aa17.43■□□□□ 0.38
RNF38-208ENST00000488058 SMCO3A2RU48 225 aa17.42■□□□□ 0.38
RNF38-208ENST00000488058 CCSO14618 274 aa17.42■□□□□ 0.38
RNF38-208ENST00000488058 SEC22CQ9BRL7 303 aa17.42■□□□□ 0.38
RNF38-208ENST00000488058 NRN1Q9NPD7 142 aa17.42■□□□□ 0.38
RNF38-208ENST00000488058 ACTL10Q5JWF8 245 aa17.41■□□□□ 0.38
RNF38-208ENST00000488058 FAM25EA8MYX2 175 aa17.4■□□□□ 0.38
RNF38-208ENST00000488058 LINC00299Q6ZSB3 139 aa17.4■□□□□ 0.38
RNF38-208ENST00000488058 SMIM8Q96KF7 97 aa17.4■□□□□ 0.38
RNF38-208ENST00000488058 FAM240BA0A1B0GVZ2 78 aa17.39■□□□□ 0.37
RNF38-208ENST00000488058 A6NHS1 94 aa17.39■□□□□ 0.37
RNF38-208ENST00000488058 CCNKO75909 580 aa17.39■□□□□ 0.37
RNF38-208ENST00000488058 H2AFB2P0C5Z0 115 aa17.39■□□□□ 0.37
RNF38-208ENST00000488058 SNRPD3P62318 126 aaKnown RBP17.39■□□□□ 0.37
RNF38-208ENST00000488058 PMS2P11Q13670 270 aa17.39■□□□□ 0.37
RNF38-208ENST00000488058 ZNF846Q147U1 533 aa17.39■□□□□ 0.37
RNF38-208ENST00000488058 GATAD1Q8WUU5 269 aa17.39■□□□□ 0.37
RNF38-208ENST00000488058 RARRES2Q99969 163 aa17.39■□□□□ 0.37
RNF38-208ENST00000488058 AGRNO00468 2067 aa17.38■□□□□ 0.37
RNF38-208ENST00000488058 METTL15P1P0C7V9 234 aa17.38■□□□□ 0.37
RNF38-208ENST00000488058 GATA2P23769 480 aaPredicted RBP17.38■□□□□ 0.37
RNF38-208ENST00000488058 RRAS2P62070 204 aaPredicted RBP17.38■□□□□ 0.37
RNF38-208ENST00000488058 EWSR1Q01844 656 aaKnown RBP eCLIP17.38■□□□□ 0.37
RNF38-208ENST00000488058 MZT2BQ6NZ67 158 aa17.38■□□□□ 0.37
RNF38-208ENST00000488058 TRPT1Q86TN4 253 aaKnown RBP17.38■□□□□ 0.37
RNF38-208ENST00000488058 BPIFCQ8NFQ6 507 aa17.38■□□□□ 0.37
RNF38-208ENST00000488058 ZNF431Q8TF32 576 aaPredicted RBP17.38■□□□□ 0.37
RNF38-208ENST00000488058 RAB40CQ96S21 281 aa17.38■□□□□ 0.37
RNF38-208ENST00000488058 FBXL17Q9UF56 701 aa17.38■□□□□ 0.37
RNF38-208ENST00000488058 TBC1D24Q9ULP9 559 aa17.38■□□□□ 0.37
RNF38-208ENST00000488058 CXorf65A6NEN9 183 aa17.37■□□□□ 0.37
RNF38-208ENST00000488058 CFDP00746 253 aaPredicted RBP17.37■□□□□ 0.37
RNF38-208ENST00000488058 PAX9P55771 341 aa17.37■□□□□ 0.37
RNF38-208ENST00000488058 OR11H2Q8NH07 326 aa17.37■□□□□ 0.37
RNF38-208ENST00000488058 RCL1Q9Y2P8 373 aaKnown RBP17.37■□□□□ 0.37
RNF38-208ENST00000488058 LCE6AA0A183 80 aa17.36■□□□□ 0.37
RNF38-208ENST00000488058 C5orf51A6NDU8 294 aa17.36■□□□□ 0.37
RNF38-208ENST00000488058 MBPP02686 304 aaPredicted RBP17.36■□□□□ 0.37
RNF38-208ENST00000488058 ORM2P19652 201 aa17.36■□□□□ 0.37
RNF38-208ENST00000488058 TMEM182Q6ZP80 229 aaPredicted RBP17.36■□□□□ 0.37
RNF38-208ENST00000488058 TMEM144Q7Z5S9 345 aa17.36■□□□□ 0.37
RNF38-208ENST00000488058 OR8I2Q8N0Y5 310 aa17.36■□□□□ 0.37
RNF38-208ENST00000488058 C12orf45Q8N5I9 185 aaPredicted RBP17.36■□□□□ 0.37
RNF38-208ENST00000488058 SLC25A22Q9H936 323 aa17.36■□□□□ 0.37
RNF38-208ENST00000488058 PMS2P5A8MQ11 134 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms