RNA–Protein interactions for RNA: ENST00000487647.5

FGFR1-222, Transcript of fibroblast growth factor receptor 1, human

TSL 1 (best)

Gene FGFR1, Length 1,608 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-222	ENST00000487647	SPATA31B1P	Q5VZV4	182 aa		11.52	□□□□□ -0.57
FGFR1-222	ENST00000487647	PATE2	Q6UY27	113 aa		11.52	□□□□□ -0.57
FGFR1-222	ENST00000487647	FAM223A	Q8IWN6	122 aa		11.52	□□□□□ -0.57
FGFR1-222	ENST00000487647	OR51G1	Q8NGK1	321 aa		11.52	□□□□□ -0.57
FGFR1-222	ENST00000487647	SVEP1	Q4LDE5	3571 aa		11.52	□□□□□ -0.57
FGFR1-222	ENST00000487647	TRBV7-1	A0A0A6YYK4	115 aa		11.51	□□□□□ -0.57
FGFR1-222	ENST00000487647	ORM2	P19652	201 aa		11.51	□□□□□ -0.57
FGFR1-222	ENST00000487647	BLCAP	P62952	87 aa		11.51	□□□□□ -0.57
FGFR1-222	ENST00000487647	C15orf32	Q32M92	178 aa		11.51	□□□□□ -0.57
FGFR1-222	ENST00000487647	TMEM86B	Q8N661	226 aa		11.51	□□□□□ -0.57
FGFR1-222	ENST00000487647	OR1B1	Q8NGR6	318 aa		11.51	□□□□□ -0.57
FGFR1-222	ENST00000487647	ZNF502	Q8TBZ5	544 aa		11.51	□□□□□ -0.57
FGFR1-222	ENST00000487647		Q8WTZ3	238 aa		11.51	□□□□□ -0.57
FGFR1-222	ENST00000487647	CCDC168	Q8NDH2	2452 aa		11.5	□□□□□ -0.57
FGFR1-222	ENST00000487647		F8W735	103 aa	Predicted RBP	11.5	□□□□□ -0.57
FGFR1-222	ENST00000487647	PAGE4	O60829	102 aa		11.5	□□□□□ -0.57
FGFR1-222	ENST00000487647	LINC00305	Q7Z4B0	112 aa		11.5	□□□□□ -0.57
FGFR1-222	ENST00000487647	EEF1AKMT3	Q96AZ1	226 aa		11.5	□□□□□ -0.57
FGFR1-222	ENST00000487647	GSX1	Q9H4S2	264 aa	Predicted RBP	11.5	□□□□□ -0.57
FGFR1-222	ENST00000487647	DOK5	Q9P104	306 aa		11.5	□□□□□ -0.57
FGFR1-222	ENST00000487647	HIGD1A	Q9Y241	93 aa		11.5	□□□□□ -0.57
FGFR1-222	ENST00000487647	PDE6D	O43924	150 aa		11.49	□□□□□ -0.57
FGFR1-222	ENST00000487647	OR7C2	O60412	319 aa		11.49	□□□□□ -0.57
FGFR1-222	ENST00000487647	OR2C1	O95371	312 aa		11.49	□□□□□ -0.57
FGFR1-222	ENST00000487647	PPIF	P30405	207 aa	Known RBP	11.49	□□□□□ -0.57
FGFR1-222	ENST00000487647	S100A7	P31151	101 aa		11.49	□□□□□ -0.57
FGFR1-222	ENST00000487647	CD81	P60033	236 aa		11.49	□□□□□ -0.57
FGFR1-222	ENST00000487647	ATP5G2	Q06055	141 aa		11.49	□□□□□ -0.57
FGFR1-222	ENST00000487647	CYB561D1	Q8N8Q1	229 aa		11.49	□□□□□ -0.57
FGFR1-222	ENST00000487647	USMG5	Q96IX5	58 aa		11.49	□□□□□ -0.57
FGFR1-222	ENST00000487647	FAM167A-AS1	Q96KT0	104 aa		11.49	□□□□□ -0.57
FGFR1-222	ENST00000487647	SLC25A2	Q9BXI2	301 aa		11.49	□□□□□ -0.57
FGFR1-222	ENST00000487647	MRPL27	Q9P0M9	148 aa	Known RBP	11.49	□□□□□ -0.57
FGFR1-222	ENST00000487647	RNF24	Q9Y225	148 aa		11.49	□□□□□ -0.57
FGFR1-222	ENST00000487647	FASN	P49327	2511 aa	Known RBP	11.49	□□□□□ -0.57
FGFR1-222	ENST00000487647	PDZD2	O15018	2839 aa		11.49	□□□□□ -0.57
FGFR1-222	ENST00000487647	C11orf94	C9JXX5	98 aa		11.49	□□□□□ -0.57
FGFR1-222	ENST00000487647	NUPL2	O15504	423 aa	Known RBP	11.49	□□□□□ -0.57
FGFR1-222	ENST00000487647	SCGB2A2	Q13296	93 aa		11.49	□□□□□ -0.57
FGFR1-222	ENST00000487647	FAM74A3	Q4VXF1	159 aa		11.49	□□□□□ -0.57
FGFR1-222	ENST00000487647	NKX6-2	Q9C056	277 aa	Predicted RBP	11.49	□□□□□ -0.57
FGFR1-222	ENST00000487647	NPFFR1	Q9GZQ6	430 aa		11.49	□□□□□ -0.57
FGFR1-222	ENST00000487647	WI2-2373I1.2	A0A1W2PRP0	233 aa		11.48	□□□□□ -0.57
FGFR1-222	ENST00000487647	TMEM89	A2RUT3	159 aa		11.48	□□□□□ -0.57
FGFR1-222	ENST00000487647		F6UZH7	168 aa		11.48	□□□□□ -0.57
FGFR1-222	ENST00000487647	CTSG	P08311	255 aa		11.48	□□□□□ -0.57
FGFR1-222	ENST00000487647	HNF1A	P20823	631 aa		11.48	□□□□□ -0.57
FGFR1-222	ENST00000487647	SRP14	P37108	136 aa	Known RBP	11.48	□□□□□ -0.57
FGFR1-222	ENST00000487647	LYZ	P61626	148 aa		11.48	□□□□□ -0.57
FGFR1-222	ENST00000487647	GUCA2B	Q16661	112 aa		11.48	□□□□□ -0.57
FGFR1-222	ENST00000487647	ZNF491	Q8N8L2	437 aa		11.48	□□□□□ -0.57
FGFR1-222	ENST00000487647	OR5AU1	Q8NGC0	362 aa		11.48	□□□□□ -0.57
FGFR1-222	ENST00000487647	OR4F5	Q8NH21	305 aa		11.48	□□□□□ -0.57
FGFR1-222	ENST00000487647	RNF125	Q96EQ8	232 aa		11.48	□□□□□ -0.57
FGFR1-222	ENST00000487647	OR4F4	Q96R69	305 aa		11.48	□□□□□ -0.57
FGFR1-222	ENST00000487647	PRSS22	Q9GZN4	317 aa		11.48	□□□□□ -0.57
FGFR1-222	ENST00000487647	OR51M1	Q9H341	326 aa		11.48	□□□□□ -0.57
FGFR1-222	ENST00000487647	TMEM160	Q9NX00	188 aa		11.48	□□□□□ -0.57
FGFR1-222	ENST00000487647	ITPR3	Q14573	2671 aa		11.47	□□□□□ -0.57
FGFR1-222	ENST00000487647		A0A1W2PRE2	83 aa		11.47	□□□□□ -0.57
FGFR1-222	ENST00000487647	HOXA3	O43365	443 aa	Predicted RBP	11.47	□□□□□ -0.57
FGFR1-222	ENST00000487647	TRGV3	P03979	118 aa		11.47	□□□□□ -0.57
FGFR1-222	ENST00000487647	KRTAP1-1	Q07627	177 aa		11.47	□□□□□ -0.57
FGFR1-222	ENST00000487647	CST9LP1	Q5W188	147 aa		11.47	□□□□□ -0.57
FGFR1-222	ENST00000487647	ZNF503	Q96F45	646 aa		11.47	□□□□□ -0.57
FGFR1-222	ENST00000487647	UHRF2	Q96PU4	802 aa		11.47	□□□□□ -0.57
FGFR1-222	ENST00000487647	PAXX	Q9BUH6	204 aa		11.47	□□□□□ -0.57
FGFR1-222	ENST00000487647	OR2T8	A6NH00	312 aa		11.46	□□□□□ -0.57
FGFR1-222	ENST00000487647	FAM74A7	A6NL05	159 aa		11.46	□□□□□ -0.57
FGFR1-222	ENST00000487647	IGLV1-40	P01703	118 aa		11.46	□□□□□ -0.57
FGFR1-222	ENST00000487647	CLEC3B	P05452	202 aa		11.46	□□□□□ -0.57
FGFR1-222	ENST00000487647	CFHR3	Q02985	330 aa		11.46	□□□□□ -0.57
FGFR1-222	ENST00000487647	FAM209B	Q5JX69	171 aa		11.46	□□□□□ -0.57
FGFR1-222	ENST00000487647	FAM90A2P	Q658T7	463 aa		11.46	□□□□□ -0.57
FGFR1-222	ENST00000487647	ZNF600	Q6ZNG1	722 aa		11.46	□□□□□ -0.57
FGFR1-222	ENST00000487647	CLRN3	Q8NCR9	226 aa		11.46	□□□□□ -0.57
FGFR1-222	ENST00000487647	TMEM190	Q8WZ59	177 aa		11.46	□□□□□ -0.57
FGFR1-222	ENST00000487647	MS4A10	Q96PG2	267 aa		11.46	□□□□□ -0.57
FGFR1-222	ENST00000487647	NIPSNAP3B	Q9BS92	247 aa		11.46	□□□□□ -0.57
FGFR1-222	ENST00000487647	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	11.46	□□□□□ -0.57
FGFR1-222	ENST00000487647	TMEM14C	Q9P0S9	112 aa		11.46	□□□□□ -0.57
FGFR1-222	ENST00000487647		S4R3C0	116 aa		11.46	□□□□□ -0.57
FGFR1-222	ENST00000487647	TRAV5	A0A0B4J249	113 aa		11.46	□□□□□ -0.58
FGFR1-222	ENST00000487647		A0A0G2JLM5	398 aa		11.46	□□□□□ -0.58
FGFR1-222	ENST00000487647	IL4	P05112	153 aa		11.46	□□□□□ -0.58
FGFR1-222	ENST00000487647	UBE2G2	P60604	165 aa		11.46	□□□□□ -0.58
FGFR1-222	ENST00000487647	UBE2L3	P68036	154 aa	Known RBP	11.46	□□□□□ -0.58
FGFR1-222	ENST00000487647	SIGLECL1	Q8N7X8	197 aa		11.46	□□□□□ -0.58
FGFR1-222	ENST00000487647	SHANK2-AS3	Q9BTD1	123 aa		11.46	□□□□□ -0.58
FGFR1-222	ENST00000487647	YAE1D1	Q9NRH1	226 aa		11.46	□□□□□ -0.58
FGFR1-222	ENST00000487647	LINC00527	Q9UJ94	153 aa		11.46	□□□□□ -0.58
FGFR1-222	ENST00000487647	ITPR2	Q14571	2701 aa		11.45	□□□□□ -0.58
FGFR1-222	ENST00000487647	ADM	P35318	185 aa		11.45	□□□□□ -0.58
FGFR1-222	ENST00000487647	CEBPG	P53567	150 aa		11.45	□□□□□ -0.58
FGFR1-222	ENST00000487647	REL	Q04864	619 aa	Predicted RBP	11.45	□□□□□ -0.58
FGFR1-222	ENST00000487647	PNRC1	Q12796	327 aa	Predicted RBP	11.45	□□□□□ -0.58
FGFR1-222	ENST00000487647	MORN5	Q5VZ52	161 aa		11.45	□□□□□ -0.58
FGFR1-222	ENST00000487647		Q6ZS46	218 aa		11.45	□□□□□ -0.58
FGFR1-222	ENST00000487647	NOL4L	Q96MY1	436 aa	Predicted RBP	11.45	□□□□□ -0.58
FGFR1-222	ENST00000487647	CSMD1	Q96PZ7	3565 aa		11.45	□□□□□ -0.58

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