RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 DNASE2O00115 360 aaPredicted RBP8.48□□□□□ -1.05
TRIM56-204ENST00000487252 APOC3P02656 99 aa8.48□□□□□ -1.05
TRIM56-204ENST00000487252 DEFA5Q01523 94 aa8.48□□□□□ -1.05
TRIM56-204ENST00000487252 ZNF266Q14584 549 aa8.48□□□□□ -1.05
TRIM56-204ENST00000487252 SERTAD4-AS1Q5TG53 156 aa8.48□□□□□ -1.05
TRIM56-204ENST00000487252 ZNF66Q6ZN08 573 aa8.48□□□□□ -1.05
TRIM56-204ENST00000487252 SEC11CQ9BY50 192 aa8.48□□□□□ -1.05
TRIM56-204ENST00000487252 UQCC1Q9NVA1 299 aa8.48□□□□□ -1.05
TRIM56-204ENST00000487252 MLXQ9UH92 298 aa8.48□□□□□ -1.05
TRIM56-204ENST00000487252 DMRT1Q9Y5R6 373 aa8.48□□□□□ -1.05
TRIM56-204ENST00000487252 UMAD1C9J7I0 102 aa8.47□□□□□ -1.05
TRIM56-204ENST00000487252 WRBO00258 174 aa8.47□□□□□ -1.05
TRIM56-204ENST00000487252 ITGB1BP1O14713 200 aa8.47□□□□□ -1.05
TRIM56-204ENST00000487252 SPINT2O43291 252 aa8.47□□□□□ -1.05
TRIM56-204ENST00000487252 SYNGR2O43760 224 aa8.47□□□□□ -1.05
TRIM56-204ENST00000487252 SCAF4O95104 1147 aaKnown RBP8.47□□□□□ -1.05
TRIM56-204ENST00000487252 SULT1A1P50225 295 aa8.47□□□□□ -1.05
TRIM56-204ENST00000487252 BRWD1-AS2P59051 145 aa8.47□□□□□ -1.05
TRIM56-204ENST00000487252 SSBP2P81877 361 aaPredicted RBP8.47□□□□□ -1.05
TRIM56-204ENST00000487252 TAGLNQ01995 201 aaKnown RBP8.47□□□□□ -1.05
TRIM56-204ENST00000487252 BTN1A1Q13410 526 aa8.47□□□□□ -1.05
TRIM56-204ENST00000487252 Q5VSD8 79 aa8.47□□□□□ -1.05
TRIM56-204ENST00000487252 ZNF833PQ6ZTB9 187 aa8.47□□□□□ -1.05
TRIM56-204ENST00000487252 PRR18Q8N4B5 295 aa8.47□□□□□ -1.05
TRIM56-204ENST00000487252 OR11H2Q8NH07 326 aa8.47□□□□□ -1.05
TRIM56-204ENST00000487252 CACNG8Q8WXS5 425 aa8.47□□□□□ -1.05
TRIM56-204ENST00000487252 CACNG5Q9UF02 275 aa8.47□□□□□ -1.05
TRIM56-204ENST00000487252 TMA7Q9Y2S6 64 aaKnown RBP8.47□□□□□ -1.05
TRIM56-204ENST00000487252 RBM7Q9Y580 266 aaKnown RBP8.47□□□□□ -1.05
TRIM56-204ENST00000487252 SELENOKQ9Y6D0 94 aa8.47□□□□□ -1.05
TRIM56-204ENST00000487252 TRAV25A0A0B4J276 109 aa8.46□□□□□ -1.06
TRIM56-204ENST00000487252 J3QL48 77 aa8.46□□□□□ -1.06
TRIM56-204ENST00000487252 DEFB4AO15263 64 aa8.46□□□□□ -1.06
TRIM56-204ENST00000487252 YPEL1O60688 119 aa8.46□□□□□ -1.06
TRIM56-204ENST00000487252 DFFBO76075 338 aa8.46□□□□□ -1.06
TRIM56-204ENST00000487252 CA2P00918 260 aa8.46□□□□□ -1.06
TRIM56-204ENST00000487252 ATP6V0CP27449 155 aa8.46□□□□□ -1.06
TRIM56-204ENST00000487252 PPP1CCP36873 323 aaKnown RBP8.46□□□□□ -1.06
TRIM56-204ENST00000487252 SNCAP37840 140 aa8.46□□□□□ -1.06
TRIM56-204ENST00000487252 RPS16P62249 146 aaKnown RBP8.46□□□□□ -1.06
TRIM56-204ENST00000487252 RPL30P62888 115 aaKnown RBP8.46□□□□□ -1.06
TRIM56-204ENST00000487252 CATR1Q13166 79 aa8.46□□□□□ -1.06
TRIM56-204ENST00000487252 TMEM30BQ3MIR4 351 aa8.46□□□□□ -1.06
TRIM56-204ENST00000487252 Q6ZTC4 211 aa8.46□□□□□ -1.06
TRIM56-204ENST00000487252 LYPD1Q8N2G4 141 aa8.46□□□□□ -1.06
TRIM56-204ENST00000487252 SVBPQ8N300 66 aa8.46□□□□□ -1.06
TRIM56-204ENST00000487252 OR5C1Q8NGR4 320 aa8.46□□□□□ -1.06
TRIM56-204ENST00000487252 GNPNAT1Q96EK6 184 aaPredicted RBP8.46□□□□□ -1.06
TRIM56-204ENST00000487252 YPEL2Q96QA6 119 aa8.46□□□□□ -1.06
TRIM56-204ENST00000487252 ATP5SQ99766 215 aa8.46□□□□□ -1.06
TRIM56-204ENST00000487252 AGMATQ9BSE5 352 aa8.46□□□□□ -1.06
TRIM56-204ENST00000487252 PARD6GQ9BYG4 376 aaPredicted RBP8.46□□□□□ -1.06
TRIM56-204ENST00000487252 NKX6-2Q9C056 277 aaPredicted RBP8.46□□□□□ -1.06
TRIM56-204ENST00000487252 OR2D2Q9H210 308 aa8.46□□□□□ -1.06
TRIM56-204ENST00000487252 SH3BGRL3Q9H299 93 aa8.46□□□□□ -1.06
TRIM56-204ENST00000487252 TREM1Q9NP99 234 aa8.46□□□□□ -1.06
TRIM56-204ENST00000487252 JPT1Q9UK76 154 aa8.46□□□□□ -1.06
TRIM56-204ENST00000487252 NACAE9PAV3 2078 aa8.45□□□□□ -1.06
TRIM56-204ENST00000487252 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.45□□□□□ -1.06
TRIM56-204ENST00000487252 LOC105371267A0A1B0GV96 52 aa8.45□□□□□ -1.06
TRIM56-204ENST00000487252 RAB29O14966 203 aa8.45□□□□□ -1.06
TRIM56-204ENST00000487252 HLA-DMBP28068 263 aa8.45□□□□□ -1.06
TRIM56-204ENST00000487252 ADMP35318 185 aa8.45□□□□□ -1.06
TRIM56-204ENST00000487252 CAMLGP49069 296 aa8.45□□□□□ -1.06
TRIM56-204ENST00000487252 AKR1C2P52895 323 aa8.45□□□□□ -1.06
TRIM56-204ENST00000487252 AKR1C1Q04828 323 aa8.45□□□□□ -1.06
TRIM56-204ENST00000487252 PLGLAQ15195 96 aa8.45□□□□□ -1.06
TRIM56-204ENST00000487252 IZUMO4Q1ZYL8 232 aa8.45□□□□□ -1.06
TRIM56-204ENST00000487252 ODF3L2Q3SX64 289 aa8.45□□□□□ -1.06
TRIM56-204ENST00000487252 AARDQ4LEZ3 155 aa8.45□□□□□ -1.06
TRIM56-204ENST00000487252 DPPA3Q6W0C5 159 aa8.45□□□□□ -1.06
TRIM56-204ENST00000487252 PUSL1Q8N0Z8 303 aaKnown RBP8.45□□□□□ -1.06
TRIM56-204ENST00000487252 HSD17B11Q8NBQ5 300 aa8.45□□□□□ -1.06
TRIM56-204ENST00000487252 OR1L6Q8NGR2 347 aa8.45□□□□□ -1.06
TRIM56-204ENST00000487252 NARS2Q96I59 477 aaKnown RBP8.45□□□□□ -1.06
TRIM56-204ENST00000487252 TMEM68Q96MH6 324 aa8.45□□□□□ -1.06
TRIM56-204ENST00000487252 HSD17B10Q99714 261 aaKnown RBP8.45□□□□□ -1.06
TRIM56-204ENST00000487252 HSPB7Q9UBY9 170 aa8.45□□□□□ -1.06
TRIM56-204ENST00000487252 TMEM213A2RRL7 107 aa8.44□□□□□ -1.06
TRIM56-204ENST00000487252 A8MWP6 167 aa8.44□□□□□ -1.06
TRIM56-204ENST00000487252 C9JQL5 133 aa8.44□□□□□ -1.06
TRIM56-204ENST00000487252 F8W036 122 aa8.44□□□□□ -1.06
TRIM56-204ENST00000487252 CST7O76096 145 aa8.44□□□□□ -1.06
TRIM56-204ENST00000487252 S1PR2O95136 353 aa8.44□□□□□ -1.06
TRIM56-204ENST00000487252 RPL35AP18077 110 aaKnown RBP8.44□□□□□ -1.06
TRIM56-204ENST00000487252 CLINT1Q14677 625 aa8.44□□□□□ -1.06
TRIM56-204ENST00000487252 FXYD3Q14802 87 aa8.44□□□□□ -1.06
TRIM56-204ENST00000487252 MORN2Q502X0 79 aa8.44□□□□□ -1.06
TRIM56-204ENST00000487252 TMEM182Q6ZP80 229 aaPredicted RBP8.44□□□□□ -1.06
TRIM56-204ENST00000487252 SPATA12Q7Z6I5 190 aa8.44□□□□□ -1.06
TRIM56-204ENST00000487252 STX12Q86Y82 276 aa8.44□□□□□ -1.06
TRIM56-204ENST00000487252 Q8NAQ8 132 aa8.44□□□□□ -1.06
TRIM56-204ENST00000487252 OR2G3Q8NGZ4 309 aa8.44□□□□□ -1.06
TRIM56-204ENST00000487252 RNASE11Q8TAA1 199 aaKnown RBP8.44□□□□□ -1.06
TRIM56-204ENST00000487252 EDARADDQ8WWZ3 215 aa8.44□□□□□ -1.06
TRIM56-204ENST00000487252 ZNF503Q96F45 646 aa8.44□□□□□ -1.06
TRIM56-204ENST00000487252 CLCC1Q96S66 551 aa8.44□□□□□ -1.06
TRIM56-204ENST00000487252 RNF5Q99942 180 aa8.44□□□□□ -1.06
TRIM56-204ENST00000487252 SMDT1Q9H4I9 107 aa8.44□□□□□ -1.06
TRIM56-204ENST00000487252 TMEM231Q9H6L2 316 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms