RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 SEPSECSQ9HD40 501 aaKnown RBP4.83□□□□□ -1.64
VAMP3-203ENST00000487194 TMEM167BQ9NRX6 74 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 TMEM160Q9NX00 188 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 VAX2Q9UIW0 290 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 RNF24Q9Y225 148 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 PDZD2O15018 2839 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 ZFHX3Q15911 3703 aa4.83□□□□□ -1.64
VAMP3-203ENST00000487194 FLNAP21333 2647 aaKnown RBP4.82□□□□□ -1.64
VAMP3-203ENST00000487194 TRBV7-1A0A0A6YYK4 115 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 TMEM89A2RUT3 159 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 PSMB11A5LHX3 300 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 LINC01548A6NM66 108 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 G3V318 75 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 HMGB3O15347 200 aaKnown RBP4.82□□□□□ -1.64
VAMP3-203ENST00000487194 APOC3P02656 99 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 ARL14EPLP0DKL9 152 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 PSG1P11464 419 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 ORM2P19652 201 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 BLCAPP62952 87 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 ATP5G2Q06055 141 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 ICAM4Q14773 271 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 C15orf32Q32M92 178 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 TIGITQ495A1 244 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 FAM209BQ5JX69 171 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 C10orf91Q5T1B1 145 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 MIR17HGQ75NE6 70 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 CCDC28AQ8IWP9 274 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 SVBPQ8N300 66 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 OR51G1Q8NGK1 321 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 ZNF502Q8TBZ5 544 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 RXFP4Q8TDU9 374 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 TMEM37Q8WXS4 190 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 USMG5Q96IX5 58 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 RARRES2Q99969 163 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 NPFFR1Q9GZQ6 430 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 YAE1D1Q9NRH1 226 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 HIGD1AQ9Y241 93 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 CARHSP1Q9Y2V2 147 aaKnown RBP4.82□□□□□ -1.64
VAMP3-203ENST00000487194 ARL2-SNX15V9GYD0 113 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 ZANQ9Y493 2812 aa4.82□□□□□ -1.64
VAMP3-203ENST00000487194 TLN2Q9Y4G6 2542 aa4.81□□□□□ -1.64
VAMP3-203ENST00000487194 A0A0G2JLM5 398 aa4.81□□□□□ -1.64
VAMP3-203ENST00000487194 C9JQL5 133 aa4.81□□□□□ -1.64
VAMP3-203ENST00000487194 TMEM250H0YL14 139 aa4.81□□□□□ -1.64
VAMP3-203ENST00000487194 NUPL2O15504 423 aaKnown RBP4.81□□□□□ -1.64
VAMP3-203ENST00000487194 HOXA3O43365 443 aaPredicted RBP4.81□□□□□ -1.64
VAMP3-203ENST00000487194 PDE6DO43924 150 aa4.81□□□□□ -1.64
VAMP3-203ENST00000487194 OR7C2O60412 319 aa4.81□□□□□ -1.64
VAMP3-203ENST00000487194 EIF3GO75821 320 aaKnown RBP eCLIP4.81□□□□□ -1.64
VAMP3-203ENST00000487194 SNAPINO95295 136 aa4.81□□□□□ -1.64
VAMP3-203ENST00000487194 OR2C1O95371 312 aa4.81□□□□□ -1.64
VAMP3-203ENST00000487194 IGKV1-17P01599 117 aa4.81□□□□□ -1.64
VAMP3-203ENST00000487194 TRGV3P03979 118 aa4.81□□□□□ -1.64
VAMP3-203ENST00000487194 SRP19P09132 144 aaKnown RBP4.81□□□□□ -1.64
VAMP3-203ENST00000487194 GCHFRP30047 84 aa4.81□□□□□ -1.64
VAMP3-203ENST00000487194 PPIFP30405 207 aaKnown RBP4.81□□□□□ -1.64
VAMP3-203ENST00000487194 LYZP61626 148 aa4.81□□□□□ -1.64
VAMP3-203ENST00000487194 DEFA5Q01523 94 aa4.81□□□□□ -1.64
VAMP3-203ENST00000487194 MEF2BQ02080 365 aaPredicted RBP4.81□□□□□ -1.64
VAMP3-203ENST00000487194 KRTAP1-1Q07627 177 aa4.81□□□□□ -1.64
VAMP3-203ENST00000487194 SOHLH1Q5JUK2 328 aa4.81□□□□□ -1.64
VAMP3-203ENST00000487194 SPATA31B1PQ5VZV4 182 aa4.81□□□□□ -1.64
VAMP3-203ENST00000487194 PATE2Q6UY27 113 aa4.81□□□□□ -1.64
VAMP3-203ENST00000487194 LINC00305Q7Z4B0 112 aa4.81□□□□□ -1.64
VAMP3-203ENST00000487194 SIGLECL1Q8N7X8 197 aa4.81□□□□□ -1.64
VAMP3-203ENST00000487194 OR5AU1Q8NGC0 362 aa4.81□□□□□ -1.64
VAMP3-203ENST00000487194 OR1B1Q8NGR6 318 aa4.81□□□□□ -1.64
VAMP3-203ENST00000487194 RNF125Q96EQ8 232 aa4.81□□□□□ -1.64
VAMP3-203ENST00000487194 MS4A10Q96PG2 267 aa4.81□□□□□ -1.64
VAMP3-203ENST00000487194 NKX6-2Q9C056 277 aaPredicted RBP4.81□□□□□ -1.64
VAMP3-203ENST00000487194 TMPRSS5Q9H3S3 457 aa4.81□□□□□ -1.64
VAMP3-203ENST00000487194 MRPL27Q9P0M9 148 aaKnown RBP4.81□□□□□ -1.64
VAMP3-203ENST00000487194 DOK5Q9P104 306 aa4.81□□□□□ -1.64
VAMP3-203ENST00000487194 DNHD1Q96M86 4753 aa4.81□□□□□ -1.64
VAMP3-203ENST00000487194 AKAP9Q99996 3911 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 A0A1W2PRE2 83 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 WI2-2373I1.2A0A1W2PRP0 233 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 OR2T8A6NH00 312 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 C11orf94C9JXX5 98 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 F6UZH7 168 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 F8W735 103 aaPredicted RBP4.8□□□□□ -1.64
VAMP3-203ENST00000487194 PAGE4O60829 102 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 IGLV1-40P01703 118 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 IL4P05112 153 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 CLEC3BP05452 202 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 CTSGP08311 255 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 ADCYAP1P18509 176 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 TPPP2P59282 170 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 UBE2L3P68036 154 aaKnown RBP4.8□□□□□ -1.64
VAMP3-203ENST00000487194 SLC35B1P78383 322 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 CFHR3Q02985 330 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 RELQ04864 619 aaPredicted RBP4.8□□□□□ -1.64
VAMP3-203ENST00000487194 FAM74A3Q4VXF1 159 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 CST9LP1Q5W188 147 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 ZNF600Q6ZNG1 722 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 ZNF491Q8N8L2 437 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 OR4F5Q8NH21 305 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 TMEM190Q8WZ59 177 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 FAM167A-AS1Q96KT0 104 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 UHRF2Q96PU4 802 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms