RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 TOR1AO14656 332 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 SLC22A5O76082 557 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 LY6HO94772 140 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 PPYP01298 95 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 IL5P05113 134 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 S100A9P06702 114 aaKnown RBP2.75□□□□□ -1.97
PTCD3-216ENST00000487043 NFYAP23511 347 aaPredicted RBP2.75□□□□□ -1.97
PTCD3-216ENST00000487043 F2RP25116 425 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 BMI1P35226 326 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 CEACAM6P40199 344 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 NMUP48645 174 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 RAB7AP51149 207 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 EDDM3BP56851 147 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 HLA-DRB3P79483 266 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 LCN2P80188 198 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 EDDM3AQ14507 147 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 SURF2Q15527 256 aaPredicted RBP2.75□□□□□ -1.97
PTCD3-216ENST00000487043 TMEM183BQ1AE95 376 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 SCGB2B2Q4G0G5 96 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 TPTE2P1Q5T6R2 138 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 LPCAT3Q6P1A2 487 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 CAMK2N1Q7Z7J9 78 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 TMEM183AQ8IXX5 376 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 H1FOOQ8IZA3 346 aaPredicted RBP2.75□□□□□ -1.97
PTCD3-216ENST00000487043 SPICQ8N5J4 248 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 FAM216BQ8N7L0 139 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 OR10J6PQ8NGY7 276 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 OR10J5Q8NHC4 309 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 TMEM158Q8WZ71 300 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 TMEM230Q96A57 120 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 GALMQ96C23 342 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 SLC35E1Q96K37 410 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 CCL19Q99731 98 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 ZNF2Q9BSG1 426 aaPredicted RBP2.75□□□□□ -1.97
PTCD3-216ENST00000487043 RTBDNQ9BSG5 229 aaPredicted RBP2.75□□□□□ -1.97
PTCD3-216ENST00000487043 LINC00574Q9H8X3 128 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 TP53TG3Q9ULZ0 132 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 FLVCR2Q9UPI3 526 aa2.75□□□□□ -1.97
PTCD3-216ENST00000487043 USP9YO00507 2555 aaPredicted RBP2.75□□□□□ -1.97
PTCD3-216ENST00000487043 HELZ2Q9BYK8 2649 aaKnown RBP2.74□□□□□ -1.97
PTCD3-216ENST00000487043 A6NDX4 124 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 ZNF729A6NN14 1252 aaPredicted RBP2.74□□□□□ -1.97
PTCD3-216ENST00000487043 I3L521 148 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 NDUFS8O00217 210 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 YPEL1O60688 119 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 HBZP02008 142 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 S100A6P06703 90 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 CTSDP07339 412 aaPredicted RBP2.74□□□□□ -1.97
PTCD3-216ENST00000487043 OR4E1P0C645 316 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 ZNF728P0DKX0 622 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 PMCHP20382 165 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 GNRHRP30968 328 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 CEACAM3P40198 252 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 TAS2R31P59538 309 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 FXYD4P59646 89 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 RRAS2P62070 204 aaPredicted RBP2.74□□□□□ -1.97
PTCD3-216ENST00000487043 RPL31P62899 125 aaKnown RBP2.74□□□□□ -1.97
PTCD3-216ENST00000487043 RPEL1Q2QD12 228 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 MORN2Q502X0 79 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 TMEM128Q5BJH2 165 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 CLLU1Q5K131 121 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 AVPI1Q5T686 147 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 TEX261Q6UWH6 196 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 TCF23Q7RTU1 214 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 MRPL55Q7Z7F7 128 aaKnown RBP2.74□□□□□ -1.97
PTCD3-216ENST00000487043 TMED4Q7Z7H5 227 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 STPG2Q8N412 459 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 Q8N9W7 124 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 LY6G5BQ8NDX9 201 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 OR8B3Q8NGG8 313 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 OR4S2Q8NH73 311 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 OR1L1Q8NH94 360 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 UBALD1Q8TB05 177 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 ZNF431Q8TF32 576 aaPredicted RBP2.74□□□□□ -1.97
PTCD3-216ENST00000487043 MITD1Q8WV92 249 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 ARL11Q969Q4 196 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 ISOC2Q96AB3 205 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 YPEL2Q96QA6 119 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 OR8B2Q96RD0 313 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 BEX2Q9BXY8 128 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 GAL3ST2Q9H3Q3 398 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 PATZ1Q9HBE1 687 aaKnown RBP2.74□□□□□ -1.97
PTCD3-216ENST00000487043 OR2S2Q9NQN1 319 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 C19orf12Q9NSK7 152 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 PRR34Q9NV39 138 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 MED9Q9NWA0 146 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 IDI2-AS1Q9NZ38 188 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 JPT1Q9UK76 154 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 KPTNQ9Y664 436 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 ALG5Q9Y673 324 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 LINC00312Q9Y6C7 94 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 U3KQ87 197 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 DCHS2Q6V1P9 2916 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 KIAA2026Q5HYC2 2103 aa2.74□□□□□ -1.97
PTCD3-216ENST00000487043 DSCAML1Q8TD84 2053 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 USF3Q68DE3 2245 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 CENPEQ02224 2701 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 PLAC8L1A1L4L8 177 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 C9orf170A2RU37 121 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 NCBP2LA6PVI3 153 aaKnown RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms