RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 NDUFS7O75251 213 aa10.75□□□□□ -0.69
HMGN1-216ENST00000486741 NHLH1Q02575 133 aa10.75□□□□□ -0.69
HMGN1-216ENST00000486741 FA2HQ7L5A8 372 aa10.75□□□□□ -0.69
HMGN1-216ENST00000486741 C19orf24Q9BVV8 132 aa10.75□□□□□ -0.69
HMGN1-216ENST00000486741 MRPL32Q9BYC8 188 aaKnown RBP10.75□□□□□ -0.69
HMGN1-216ENST00000486741 GPR183P32249 361 aa10.75□□□□□ -0.69
HMGN1-216ENST00000486741 LINC00479Q96M42 142 aa10.75□□□□□ -0.69
HMGN1-216ENST00000486741 ZNF257Q9Y2Q1 563 aa10.75□□□□□ -0.69
HMGN1-216ENST00000486741 OR2T8A6NH00 312 aa10.75□□□□□ -0.69
HMGN1-216ENST00000486741 RNASE2P10153 161 aaKnown RBP10.75□□□□□ -0.69
HMGN1-216ENST00000486741 ATP5IP56385 69 aaPredicted RBP10.75□□□□□ -0.69
HMGN1-216ENST00000486741 MAJINQ3KP22 176 aa10.75□□□□□ -0.69
HMGN1-216ENST00000486741 NCKAP5O14513 1909 aa10.75□□□□□ -0.69
HMGN1-216ENST00000486741 PEX7O00628 323 aa10.75□□□□□ -0.69
HMGN1-216ENST00000486741 SCGB2A2Q13296 93 aa10.75□□□□□ -0.69
HMGN1-216ENST00000486741 C14orf144Q96I85 54 aa10.75□□□□□ -0.69
HMGN1-216ENST00000486741 NEU1Q99519 415 aa10.75□□□□□ -0.69
HMGN1-216ENST00000486741 FBXL7Q9UJT9 491 aa10.75□□□□□ -0.69
HMGN1-216ENST00000486741 KIAA1549Q9HCM3 1950 aa10.75□□□□□ -0.69
HMGN1-216ENST00000486741 FBLL1A6NHQ2 334 aaKnown RBP10.74□□□□□ -0.69
HMGN1-216ENST00000486741 A6NNC1 897 aa10.74□□□□□ -0.69
HMGN1-216ENST00000486741 A8MWL6 223 aa10.74□□□□□ -0.69
HMGN1-216ENST00000486741 K7ERU9 68 aa10.74□□□□□ -0.69
HMGN1-216ENST00000486741 VDAC2P45880 294 aaPredicted RBP10.74□□□□□ -0.69
HMGN1-216ENST00000486741 TFPI2P48307 235 aa10.74□□□□□ -0.69
HMGN1-216ENST00000486741 LINC01551Q86U37 167 aa10.74□□□□□ -0.69
HMGN1-216ENST00000486741 CCL19Q99731 98 aa10.74□□□□□ -0.69
HMGN1-216ENST00000486741 CTSZQ9UBR2 303 aa10.74□□□□□ -0.69
HMGN1-216ENST00000486741 TCRBV4S1A1TA0A5B7 111 aa10.74□□□□□ -0.69
HMGN1-216ENST00000486741 TCTAP57738 103 aa10.74□□□□□ -0.69
HMGN1-216ENST00000486741 C2orf83Q53S99 150 aa10.74□□□□□ -0.69
HMGN1-216ENST00000486741 ARPC1AQ92747 370 aa10.74□□□□□ -0.69
HMGN1-216ENST00000486741 TMEM167AQ8TBQ9 72 aa10.74□□□□□ -0.69
HMGN1-216ENST00000486741 NDUFAF3Q9BU61 184 aa10.74□□□□□ -0.69
HMGN1-216ENST00000486741 SETD2Q9BYW2 2564 aaPredicted RBP10.73□□□□□ -0.69
HMGN1-216ENST00000486741 LOC389332A0A1B0GUA5 103 aa10.73□□□□□ -0.69
HMGN1-216ENST00000486741 A0A1B0GW64 132 aa10.73□□□□□ -0.69
HMGN1-216ENST00000486741 A0A1W2PPI3 338 aa10.73□□□□□ -0.69
HMGN1-216ENST00000486741 ASPHD1Q5U4P2 390 aa10.73□□□□□ -0.69
HMGN1-216ENST00000486741 ZNF738Q8NE65 137 aa10.73□□□□□ -0.69
HMGN1-216ENST00000486741 UFC1Q9Y3C8 167 aa10.73□□□□□ -0.69
HMGN1-216ENST00000486741 ARHGAP32A7KAX9 2087 aa10.73□□□□□ -0.69
HMGN1-216ENST00000486741 NAV2Q8IVL1 2488 aa10.73□□□□□ -0.69
HMGN1-216ENST00000486741 BUB1B-PAK6H3BSN5 160 aa10.73□□□□□ -0.69
HMGN1-216ENST00000486741 GCGP01275 180 aa10.73□□□□□ -0.69
HMGN1-216ENST00000486741 TMEM14BQ9NUH8 114 aa10.73□□□□□ -0.69
HMGN1-216ENST00000486741 C21orf62Q9NYP8 219 aa10.73□□□□□ -0.69
HMGN1-216ENST00000486741 RABAC1Q9UI14 185 aa10.73□□□□□ -0.69
HMGN1-216ENST00000486741 TEX38Q6PEX7 206 aa10.73□□□□□ -0.69
HMGN1-216ENST00000486741 UNQ6494/PRO21346Q6UXR6 183 aa10.73□□□□□ -0.69
HMGN1-216ENST00000486741 TMEM219Q86XT9 240 aa10.73□□□□□ -0.69
HMGN1-216ENST00000486741 TEX45Q8NA69 505 aa10.73□□□□□ -0.69
HMGN1-216ENST00000486741 ASCL2Q99929 193 aa10.73□□□□□ -0.69
HMGN1-216ENST00000486741 AARDQ4LEZ3 155 aa10.72□□□□□ -0.69
HMGN1-216ENST00000486741 TMEM155Q4W5P6 130 aa10.72□□□□□ -0.69
HMGN1-216ENST00000486741 SIGLEC9Q9Y336 463 aa10.72□□□□□ -0.69
HMGN1-216ENST00000486741 FCER1GP30273 86 aa10.72□□□□□ -0.69
HMGN1-216ENST00000486741 PDLIM4P50479 330 aa10.72□□□□□ -0.69
HMGN1-216ENST00000486741 Q8NA96 180 aa10.72□□□□□ -0.69
HMGN1-216ENST00000486741 Q8TCH9 128 aa10.72□□□□□ -0.69
HMGN1-216ENST00000486741 IL36BQ9NZH7 164 aa10.72□□□□□ -0.69
HMGN1-216ENST00000486741 SONP18583 2426 aaKnown RBP10.72□□□□□ -0.69
HMGN1-216ENST00000486741 PSG1P11464 419 aa10.72□□□□□ -0.69
HMGN1-216ENST00000486741 HTN1P15515 57 aa10.72□□□□□ -0.69
HMGN1-216ENST00000486741 Q9H3A6 140 aa10.72□□□□□ -0.69
HMGN1-216ENST00000486741 J3QR89 54 aa10.72□□□□□ -0.69
HMGN1-216ENST00000486741 ISLRO14498 428 aa10.72□□□□□ -0.69
HMGN1-216ENST00000486741 LHBP01229 141 aa10.72□□□□□ -0.69
HMGN1-216ENST00000486741 IGHV3-11P01762 117 aa10.72□□□□□ -0.69
HMGN1-216ENST00000486741 DAZAP2Q15038 168 aaPredicted RBP10.72□□□□□ -0.69
HMGN1-216ENST00000486741 ERASQ7Z444 233 aa10.72□□□□□ -0.69
HMGN1-216ENST00000486741 FAM168AQ92567 244 aa10.72□□□□□ -0.69
HMGN1-216ENST00000486741 WNK1Q9H4A3 2382 aa10.71□□□□□ -0.69
HMGN1-216ENST00000486741 SHISA9B4DS77 424 aa10.71□□□□□ -0.69
HMGN1-216ENST00000486741 BMPR1BO00238 502 aa10.71□□□□□ -0.69
HMGN1-216ENST00000486741 BRD3OSQ6XYD6 125 aa10.71□□□□□ -0.69
HMGN1-216ENST00000486741 PIMREGQ9BSJ6 248 aa10.71□□□□□ -0.69
HMGN1-216ENST00000486741 SSBP4Q9BWG4 385 aaPredicted RBP10.71□□□□□ -0.69
HMGN1-216ENST00000486741 SPTBN5Q9NRC6 3674 aaKnown RBP10.71□□□□□ -0.69
HMGN1-216ENST00000486741 PROP1O75360 226 aa10.71□□□□□ -0.69
HMGN1-216ENST00000486741 WT1-ASQ06250 92 aa10.71□□□□□ -0.69
HMGN1-216ENST00000486741 CLEC19AQ6UXS0 136 aa10.71□□□□□ -0.69
HMGN1-216ENST00000486741 TCF24Q7RTU0 167 aa10.71□□□□□ -0.69
HMGN1-216ENST00000486741 VMO1Q7Z5L0 202 aa10.71□□□□□ -0.69
HMGN1-216ENST00000486741 ATOH7Q8N100 152 aa10.71□□□□□ -0.69
HMGN1-216ENST00000486741 SCRT1Q9BWW7 348 aa10.71□□□□□ -0.69
HMGN1-216ENST00000486741 C7orf69Q9H7B7 122 aa10.71□□□□□ -0.69
HMGN1-216ENST00000486741 USP9XQ93008 2570 aaPredicted RBP10.71□□□□□ -0.7
HMGN1-216ENST00000486741 BPESC1Q9GZL8 116 aa10.71□□□□□ -0.7
HMGN1-216ENST00000486741 FRYLO94915 3013 aa10.71□□□□□ -0.7
HMGN1-216ENST00000486741 DYSFO75923 2080 aa10.71□□□□□ -0.7
HMGN1-216ENST00000486741 DIRC3C9JPN6 131 aa10.7□□□□□ -0.7
HMGN1-216ENST00000486741 COMPP49747 757 aaPredicted RBP10.7□□□□□ -0.7
HMGN1-216ENST00000486741 C10orf91Q5T1B1 145 aa10.7□□□□□ -0.7
HMGN1-216ENST00000486741 TEX36Q5VZQ5 186 aa10.7□□□□□ -0.7
HMGN1-216ENST00000486741 TMEM183AQ8IXX5 376 aa10.7□□□□□ -0.7
HMGN1-216ENST00000486741 EXOC3-AS1Q8N2X6 119 aa10.7□□□□□ -0.7
HMGN1-216ENST00000486741 HIVEP3Q5T1R4 2406 aa10.7□□□□□ -0.7
HMGN1-216ENST00000486741 ABCA2Q9BZC7 2435 aa10.7□□□□□ -0.7
HMGN1-216ENST00000486741 TRAV8-1A0A0A6YYK1 113 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms