RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 MRPS12O15235 138 aaKnown RBP5.29□□□□□ -1.56
HDAC3-209ENST00000486618 HPRT1P00492 218 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 RBP4P02753 201 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 AMBPP02760 352 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 PFN1P07737 140 aaKnown RBP5.29□□□□□ -1.56
HDAC3-209ENST00000486618 MRPL3P09001 348 aaKnown RBP5.29□□□□□ -1.56
HDAC3-209ENST00000486618 SNRPCP09234 159 aaKnown RBP5.29□□□□□ -1.56
HDAC3-209ENST00000486618 OR5G3P0C626 314 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 CCL3L1P16619 93 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 MYL9P24844 172 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 TNFSF8P32971 234 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 MYCNOSP40205 109 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 THBS3P49746 956 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 GNG4P50150 75 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 ERVFC1-1P60608 527 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 LRRC37A5PQ49AS3 106 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 PHLDA2Q53GA4 152 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 ZNF626Q68DY1 528 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 LCN8Q6JVE9 175 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 TCTE3Q8IZS6 198 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 OR8I2Q8N0Y5 310 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 LRTM2Q8N967 370 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 OR2T33Q8NG76 320 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 OR11H6Q8NGC7 330 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 OR4M1Q8NGD0 313 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 EEF1AKMT3Q96AZ1 226 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 ACY3Q96HD9 319 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 PGLYRP3Q96LB9 341 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 AP4S1Q9Y587 144 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 HILPDAQ9Y5L2 63 aa5.29□□□□□ -1.56
HDAC3-209ENST00000486618 DHRS12A0PJE2 317 aa5.28□□□□□ -1.56
HDAC3-209ENST00000486618 NME4O00746 187 aa5.28□□□□□ -1.56
HDAC3-209ENST00000486618 BUB3O43684 328 aa5.28□□□□□ -1.56
HDAC3-209ENST00000486618 MOSP00540 346 aa5.28□□□□□ -1.56
HDAC3-209ENST00000486618 TTRP02766 147 aa5.28□□□□□ -1.56
HDAC3-209ENST00000486618 TFAP2AP05549 437 aa5.28□□□□□ -1.56
HDAC3-209ENST00000486618 PGA5P0DJD9 388 aa5.28□□□□□ -1.56
HDAC3-209ENST00000486618 ZNF728P0DKX0 622 aa5.28□□□□□ -1.56
HDAC3-209ENST00000486618 SRIP30626 198 aa5.28□□□□□ -1.56
HDAC3-209ENST00000486618 OPRL1P41146 370 aa5.28□□□□□ -1.56
HDAC3-209ENST00000486618 GPM6AP51674 278 aa5.28□□□□□ -1.56
HDAC3-209ENST00000486618 GNG5P63218 68 aa5.28□□□□□ -1.56
HDAC3-209ENST00000486618 RHOGP84095 191 aa5.28□□□□□ -1.56
HDAC3-209ENST00000486618 ABCA11PQ4W5N1 156 aa5.28□□□□□ -1.56
HDAC3-209ENST00000486618 ZNF66Q6ZN08 573 aa5.28□□□□□ -1.56
HDAC3-209ENST00000486618 ACP7Q6ZNF0 438 aa5.28□□□□□ -1.56
HDAC3-209ENST00000486618 GOLT1AQ6ZVE7 132 aa5.28□□□□□ -1.56
HDAC3-209ENST00000486618 MRPL55Q7Z7F7 128 aaKnown RBP5.28□□□□□ -1.56
HDAC3-209ENST00000486618 TEX45Q8NA69 505 aa5.28□□□□□ -1.56
HDAC3-209ENST00000486618 OR13C8Q8NGS7 320 aa5.28□□□□□ -1.56
HDAC3-209ENST00000486618 DEDD2Q8WXF8 326 aa5.28□□□□□ -1.56
HDAC3-209ENST00000486618 NRIP2Q9BQI9 281 aa5.28□□□□□ -1.56
HDAC3-209ENST00000486618 OR2D2Q9H210 308 aa5.28□□□□□ -1.56
HDAC3-209ENST00000486618 OR51I2Q9H344 312 aa5.28□□□□□ -1.56
HDAC3-209ENST00000486618 RBKSQ9H477 322 aa5.28□□□□□ -1.56
HDAC3-209ENST00000486618 HES4Q9HCC6 221 aa5.28□□□□□ -1.56
HDAC3-209ENST00000486618 BIRC6Q9NR09 4857 aa5.28□□□□□ -1.56
HDAC3-209ENST00000486618 KIAA2026Q5HYC2 2103 aa5.27□□□□□ -1.57
HDAC3-209ENST00000486618 FAM240AA0A1B0GVK7 77 aa5.27□□□□□ -1.57
HDAC3-209ENST00000486618 FABP5P3A8MUU1 101 aa5.27□□□□□ -1.57
HDAC3-209ENST00000486618 J3QR89 54 aa5.27□□□□□ -1.57
HDAC3-209ENST00000486618 PHOX2AO14813 284 aa5.27□□□□□ -1.57
HDAC3-209ENST00000486618 CYB5AP00167 134 aa5.27□□□□□ -1.57
HDAC3-209ENST00000486618 GYPBP06028 91 aa5.27□□□□□ -1.57
HDAC3-209ENST00000486618 IGHV1-8P0DP01 117 aa5.27□□□□□ -1.57
HDAC3-209ENST00000486618 PIPP12273 146 aaPredicted RBP5.27□□□□□ -1.57
HDAC3-209ENST00000486618 GALR1P47211 349 aa5.27□□□□□ -1.57
HDAC3-209ENST00000486618 REG1BP48304 166 aa5.27□□□□□ -1.57
HDAC3-209ENST00000486618 TAS2R20P59543 309 aa5.27□□□□□ -1.57
HDAC3-209ENST00000486618 CX3CL1P78423 397 aa5.27□□□□□ -1.57
HDAC3-209ENST00000486618 HIST1H1AQ02539 215 aaPredicted RBP5.27□□□□□ -1.57
HDAC3-209ENST00000486618 LAGE3Q14657 143 aa5.27□□□□□ -1.57
HDAC3-209ENST00000486618 CLINT1Q14677 625 aa5.27□□□□□ -1.57
HDAC3-209ENST00000486618 RBMS2Q15434 407 aaKnown RBP5.27□□□□□ -1.57
HDAC3-209ENST00000486618 C9orf66Q5T8R8 295 aa5.27□□□□□ -1.57
HDAC3-209ENST00000486618 GTF2H5Q6ZYL4 71 aa5.27□□□□□ -1.57
HDAC3-209ENST00000486618 CD177Q8N6Q3 437 aa5.27□□□□□ -1.57
HDAC3-209ENST00000486618 AQP3Q92482 292 aa5.27□□□□□ -1.57
HDAC3-209ENST00000486618 RASL10AQ92737 203 aa5.27□□□□□ -1.57
HDAC3-209ENST00000486618 NRN1Q9NPD7 142 aa5.27□□□□□ -1.57
HDAC3-209ENST00000486618 NAT8Q9UHE5 227 aa5.27□□□□□ -1.57
HDAC3-209ENST00000486618 RFNGQ9Y644 331 aa5.27□□□□□ -1.57
HDAC3-209ENST00000486618 GAGE12JA6NER3 117 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 C15orf62A8K5M9 175 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 H3BMQ9 156 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 K7N7A8 449 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 DHRS3O75911 302 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 GAGE7O76087 117 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 KBTBD11O94819 623 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 YIF1AO95070 293 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 CD2P06729 351 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 GAGE12FP0CL80 117 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 GAGE12GP0CL81 117 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 GAGE12IP0CL82 117 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 MYOD1P15172 320 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 GNB3P16520 340 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 ATF1P18846 271 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 PSMB9P28065 219 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 GPR183P32249 361 aa5.26□□□□□ -1.57
HDAC3-209ENST00000486618 G6PCP35575 357 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms