RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 HIST1H2BKO60814 126 aa16.08■□□□□ 0.17
HPS3-206ENST00000486530 HIST1H2BJP06899 126 aa16.08■□□□□ 0.17
HPS3-206ENST00000486530 PLA2G2AP14555 144 aa16.08■□□□□ 0.17
HPS3-206ENST00000486530 HNF1AP20823 631 aa16.08■□□□□ 0.17
HPS3-206ENST00000486530 HIST1H2BOP23527 126 aa16.08■□□□□ 0.17
HPS3-206ENST00000486530 HIST1H2BBP33778 126 aa16.08■□□□□ 0.17
HPS3-206ENST00000486530 HIST1H2BDP58876 126 aa16.08■□□□□ 0.17
HPS3-206ENST00000486530 HIST1H2BCP62807 126 aa16.08■□□□□ 0.17
HPS3-206ENST00000486530 HIST2H2BEQ16778 126 aa16.08■□□□□ 0.17
HPS3-206ENST00000486530 TIGITQ495A1 244 aa16.08■□□□□ 0.17
HPS3-206ENST00000486530 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.08■□□□□ 0.17
HPS3-206ENST00000486530 OR10G8Q8NGN5 311 aa16.08■□□□□ 0.17
HPS3-206ENST00000486530 HIST1H2BHQ93079 126 aa16.08■□□□□ 0.17
HPS3-206ENST00000486530 HIST1H2BNQ99877 126 aa16.08■□□□□ 0.17
HPS3-206ENST00000486530 HIST1H2BMQ99879 126 aa16.08■□□□□ 0.17
HPS3-206ENST00000486530 HIGD1AQ9Y241 93 aa16.08■□□□□ 0.17
HPS3-206ENST00000486530 IGLV11-55A0A075B6I3 123 aa16.08■□□□□ 0.16
HPS3-206ENST00000486530 J3QKU1 62 aa16.08■□□□□ 0.16
HPS3-206ENST00000486530 TYMSP04818 313 aa16.08■□□□□ 0.16
HPS3-206ENST00000486530 FAM3BP58499 235 aaPredicted RBP16.08■□□□□ 0.16
HPS3-206ENST00000486530 LYZP61626 148 aa16.08■□□□□ 0.16
HPS3-206ENST00000486530 CLEC2AQ6UVW9 174 aa16.08■□□□□ 0.16
HPS3-206ENST00000486530 Q8N9W7 124 aa16.08■□□□□ 0.16
HPS3-206ENST00000486530 VWC2LB2RUY7 222 aa16.07■□□□□ 0.16
HPS3-206ENST00000486530 IGKV1-17P01599 117 aa16.07■□□□□ 0.16
HPS3-206ENST00000486530 COX6B1P14854 86 aa16.07■□□□□ 0.16
HPS3-206ENST00000486530 PAX8Q06710 450 aa16.07■□□□□ 0.16
HPS3-206ENST00000486530 FOXL1Q12952 345 aa16.07■□□□□ 0.16
HPS3-206ENST00000486530 ZNF329Q86UD4 541 aa16.07■□□□□ 0.16
HPS3-206ENST00000486530 IGHV4-61A0A0C4DH41 118 aa16.06■□□□□ 0.16
HPS3-206ENST00000486530 PHOX2AO14813 284 aa16.06■□□□□ 0.16
HPS3-206ENST00000486530 HLA-DRB1P01911 266 aa16.06■□□□□ 0.16
HPS3-206ENST00000486530 RD3LP0DJH9 198 aa16.06■□□□□ 0.16
HPS3-206ENST00000486530 ATP5J2P56134 94 aa16.06■□□□□ 0.16
HPS3-206ENST00000486530 FANCD2OSQ96PS1 177 aa16.06■□□□□ 0.16
HPS3-206ENST00000486530 MED13LQ71F56 2210 aa16.06■□□□□ 0.16
HPS3-206ENST00000486530 IGHV7-81A0A0B4J1V7 117 aa16.05■□□□□ 0.16
HPS3-206ENST00000486530 GP9P14770 177 aa16.05■□□□□ 0.16
HPS3-206ENST00000486530 FAM120AOSQ5T036 256 aa16.05■□□□□ 0.16
HPS3-206ENST00000486530 FRZBQ92765 325 aa16.05■□□□□ 0.16
HPS3-206ENST00000486530 ZNF48Q96MX3 618 aaPredicted RBP16.05■□□□□ 0.16
HPS3-206ENST00000486530 ABCA2Q9BZC7 2435 aa16.05■□□□□ 0.16
HPS3-206ENST00000486530 TRAV30A0A087WSZ9 112 aa16.05■□□□□ 0.16
HPS3-206ENST00000486530 CENPVL3A0A0U1RRI6 287 aa16.05■□□□□ 0.16
HPS3-206ENST00000486530 TRGC1P0CF51 173 aa16.05■□□□□ 0.16
HPS3-206ENST00000486530 TAS2R60P59551 318 aa16.05■□□□□ 0.16
HPS3-206ENST00000486530 CLEC12BQ2HXU8 276 aa16.05■□□□□ 0.16
HPS3-206ENST00000486530 KLF17Q5JT82 389 aaPredicted RBP16.05■□□□□ 0.16
HPS3-206ENST00000486530 SGMS2Q8NHU3 365 aa16.05■□□□□ 0.16
HPS3-206ENST00000486530 IGF2BP2-AS1Q96M15 143 aa16.05■□□□□ 0.16
HPS3-206ENST00000486530 THYN1Q9P016 225 aa16.05■□□□□ 0.16
HPS3-206ENST00000486530 CDC42EP3Q9UKI2 254 aa16.05■□□□□ 0.16
HPS3-206ENST00000486530 TOMM40O96008 361 aa16.04■□□□□ 0.16
HPS3-206ENST00000486530 S100A8P05109 93 aa16.04■□□□□ 0.16
HPS3-206ENST00000486530 MYCNOSP40205 109 aa16.04■□□□□ 0.16
HPS3-206ENST00000486530 CNN1P51911 297 aaKnown RBP16.04■□□□□ 0.16
HPS3-206ENST00000486530 NDUFA6P56556 154 aa16.04■□□□□ 0.16
HPS3-206ENST00000486530 PIP4P2Q8N4L2 257 aa16.04■□□□□ 0.16
HPS3-206ENST00000486530 PEX7O00628 323 aa16.03■□□□□ 0.16
HPS3-206ENST00000486530 NBEAP1P0C6P0 100 aa16.03■□□□□ 0.16
HPS3-206ENST00000486530 HOXA5P20719 270 aa16.03■□□□□ 0.16
HPS3-206ENST00000486530 NRGNQ92686 78 aa16.03■□□□□ 0.16
HPS3-206ENST00000486530 SLC25A39Q9BZJ4 359 aaPredicted RBP16.03■□□□□ 0.16
HPS3-206ENST00000486530 MRPL27Q9P0M9 148 aaKnown RBP16.03■□□□□ 0.16
HPS3-206ENST00000486530 EGR2P11161 476 aaPredicted RBP16.03■□□□□ 0.16
HPS3-206ENST00000486530 MFAP4P55083 255 aa16.03■□□□□ 0.16
HPS3-206ENST00000486530 TMEM14CQ9P0S9 112 aa16.03■□□□□ 0.16
HPS3-206ENST00000486530 ABCA1O95477 2261 aa16.03■□□□□ 0.16
HPS3-206ENST00000486530 GNG7O60262 68 aa16.02■□□□□ 0.16
HPS3-206ENST00000486530 ERVFC1-1P60608 527 aa16.02■□□□□ 0.16
HPS3-206ENST00000486530 BLNKQ8WV28 456 aa16.02■□□□□ 0.16
HPS3-206ENST00000486530 IL36BQ9NZH7 164 aa16.02■□□□□ 0.16
HPS3-206ENST00000486530 UTP20O75691 2785 aaKnown RBP16.02■□□□□ 0.15
HPS3-206ENST00000486530 TRAV9-1A0A075B6T8 112 aa16.01■□□□□ 0.15
HPS3-206ENST00000486530 GCGP01275 180 aa16.01■□□□□ 0.15
HPS3-206ENST00000486530 PAX1P15863 534 aa16.01■□□□□ 0.15
HPS3-206ENST00000486530 YPEL3P61236 119 aaPredicted RBP16.01■□□□□ 0.15
HPS3-206ENST00000486530 RANP62826 216 aaKnown RBP16.01■□□□□ 0.15
HPS3-206ENST00000486530 IGLV2-8P01709 118 aa16.01■□□□□ 0.15
HPS3-206ENST00000486530 OR5I1Q13606 314 aa16.01■□□□□ 0.15
HPS3-206ENST00000486530 LEMD1Q68G75 181 aa16.01■□□□□ 0.15
HPS3-206ENST00000486530 ZNF600Q6ZNG1 722 aa16.01■□□□□ 0.15
HPS3-206ENST00000486530 OSTCQ9NRP0 149 aa16.01■□□□□ 0.15
HPS3-206ENST00000486530 C21orf62Q9NYP8 219 aa16.01■□□□□ 0.15
HPS3-206ENST00000486530 IGHV4-30-2A0A087WSY4 118 aa16■□□□□ 0.15
HPS3-206ENST00000486530 IGHV1-69DA0A0B4J2H0 117 aa16■□□□□ 0.15
HPS3-206ENST00000486530 IGHV1-69P01742 117 aa16■□□□□ 0.15
HPS3-206ENST00000486530 HIST1H1BP16401 226 aaKnown RBP16■□□□□ 0.15
HPS3-206ENST00000486530 CDX1P47902 265 aaPredicted RBP16■□□□□ 0.15
HPS3-206ENST00000486530 ACTL10Q5JWF8 245 aa16■□□□□ 0.15
HPS3-206ENST00000486530 RNF125Q96EQ8 232 aa16■□□□□ 0.15
HPS3-206ENST00000486530 HSPB9Q9BQS6 159 aa16■□□□□ 0.15
HPS3-206ENST00000486530 A0A0U1RQK1 487 aa15.99■□□□□ 0.15
HPS3-206ENST00000486530 ZNF320A2RRD8 509 aa15.99■□□□□ 0.15
HPS3-206ENST00000486530 H3BRN7 92 aa15.99■□□□□ 0.15
HPS3-206ENST00000486530 SLC25A5P05141 298 aaKnown RBP15.99■□□□□ 0.15
HPS3-206ENST00000486530 MEOX2P50222 304 aa15.99■□□□□ 0.15
HPS3-206ENST00000486530 S100A7AQ86SG5 101 aa15.99■□□□□ 0.15
HPS3-206ENST00000486530 ZNF491Q8N8L2 437 aa15.99■□□□□ 0.15
HPS3-206ENST00000486530 FAM110DQ8TAY7 271 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 221.4 ms