RNA–Protein interactions for RNA: ENST00000486446.2

PUDP-204, Transcript of pseudouridine 5'-phosphatase, human

TSL 2

Gene PUDP, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUDP-204	ENST00000486446	IGHV3-43D	P0DP04	118 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	CCL3L1	P16619	93 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	FGF7	P21781	194 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	S100P	P25815	95 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	OPRK1	P41145	380 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	IER3	P46695	156 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	UBE2E1	P51965	193 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	DLX6	P56179	175 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	ZNF816	Q0VGE8	651 aa	Predicted RBP	5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	KIAA0141	Q14154	515 aa	Predicted RBP	5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	RTL8B	Q17RB0	113 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	TMEM241	Q24JQ0	296 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	ACOT6	Q3I5F7	207 aa	Predicted RBP	5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	AKIRIN2	Q53H80	203 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	RNF152	Q8N8N0	203 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	ZNF383	Q8NA42	475 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	OR10G9	Q8NGN4	311 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	OR10G7	Q8NGN6	311 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	OR5B3	Q8NH48	314 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	ST6GALNAC6	Q969X2	333 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	FAM210B	Q96KR6	192 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	ZNF714	Q96N38	554 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	IMMP2L	Q96T52	175 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	RNF5	Q99942	180 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	SRD5A3	Q9H8P0	318 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	KCNIP2	Q9NS61	270 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	BET1L	Q9NYM9	111 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	C1RL	Q9NZP8	487 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	DOK5	Q9P104	306 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	ZNRD1	Q9P1U0	126 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	ARL2-SNX15	V9GYD0	113 aa		5.72	□□□□□ -1.49
PUDP-204	ENST00000486446	TENM1	Q9UKZ4	2725 aa		5.71	□□□□□ -1.49
PUDP-204	ENST00000486446	TRAV34	A0A0B4J273	112 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446		A0A1B0GUS0	222 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	CLPSL1	A2RUU4	121 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	IFITM10	A6NMD0	228 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	C15orf61	A6NNL5	157 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	CEBPZOS	A8MTT3	80 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446		F6UZH7	168 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	UPK2	O00526	184 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	PDE6D	O43924	150 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	HIST1H2BK	O60814	126 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	GGCT	O75223	188 aa	Known RBP	5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	NDUFA7	O95182	113 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	HIST1H2BJ	P06899	126 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	OR9G9	P0C7N8	305 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	HIST1H2BO	P23527	126 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	CD1B	P29016	333 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	HIST1H2BB	P33778	126 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	RPS10	P46783	165 aa	Known RBP	5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	LGALS7	P47929	136 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	LGALS4	P56470	323 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	HIST1H2BD	P58876	126 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	OR2B8P	P59922	312 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	RPL15	P61313	204 aa	Known RBP	5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	HIST1H2BC	P62807	126 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	RPL23	P62829	140 aa	Known RBP	5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	HIST2H2BE	Q16778	126 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	RPL39P5	Q59GN2	51 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	OR8G2P	Q6IF36	304 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	HCP5	Q6MZN7	132 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	FAM53A	Q6NSI3	398 aa	Predicted RBP	5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	ZNF343	Q6P1L6	599 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	C11orf42	Q8N5U0	333 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	ZNF709	Q8N972	641 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	BEND2	Q8NDZ0	799 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	VSTM2A	Q8TAG5	236 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	CACNG8	Q8WXS5	425 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	HIST1H2BH	Q93079	126 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	RAB24	Q969Q5	203 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	BTF3L4	Q96K17	158 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	HIST1H2BN	Q99877	126 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	HIST1H2BM	Q99879	126 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	SMIM7	Q9BQ49	75 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	QTRT1	Q9BXR0	403 aa	Known RBP	5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	GSN-AS1	Q9NRJ2	163 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	TMEM140	Q9NV12	185 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	VPREB3	Q9UKI3	123 aa		5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	LSM4	Q9Y4Z0	139 aa	Known RBP	5.71	□□□□□ -1.5
PUDP-204	ENST00000486446	TGIF2-C20orf24	A0A0A6YYL0	155 aa		5.7	□□□□□ -1.5
PUDP-204	ENST00000486446		H3BUX3	64 aa		5.7	□□□□□ -1.5
PUDP-204	ENST00000486446		J3QR06	171 aa		5.7	□□□□□ -1.5
PUDP-204	ENST00000486446	SLC31A2	O15432	143 aa		5.7	□□□□□ -1.5
PUDP-204	ENST00000486446	RBMXL2	O75526	392 aa	Known RBP	5.7	□□□□□ -1.5
PUDP-204	ENST00000486446	CLEC3B	P05452	202 aa		5.7	□□□□□ -1.5
PUDP-204	ENST00000486446	STAG3L2	P0CL84	134 aa		5.7	□□□□□ -1.5
PUDP-204	ENST00000486446	CDKN1B	P46527	198 aa		5.7	□□□□□ -1.5
PUDP-204	ENST00000486446	CDC34	P49427	236 aa	Predicted RBP	5.7	□□□□□ -1.5
PUDP-204	ENST00000486446	FGF8	P55075	233 aa	Predicted RBP	5.7	□□□□□ -1.5
PUDP-204	ENST00000486446	ELL	P55199	621 aa	Predicted RBP	5.7	□□□□□ -1.5
PUDP-204	ENST00000486446	RAB31	Q13636	194 aa		5.7	□□□□□ -1.5
PUDP-204	ENST00000486446	LY6E	Q16553	131 aa		5.7	□□□□□ -1.5
PUDP-204	ENST00000486446	BSX	Q3C1V8	233 aa		5.7	□□□□□ -1.5
PUDP-204	ENST00000486446	FFAR4	Q5NUL3	377 aa		5.7	□□□□□ -1.5
PUDP-204	ENST00000486446	PRAMEF5	Q5TYX0	476 aa		5.7	□□□□□ -1.5
PUDP-204	ENST00000486446	OR4A47	Q6IF82	309 aa		5.7	□□□□□ -1.5
PUDP-204	ENST00000486446	PDPN	Q86YL7	162 aa		5.7	□□□□□ -1.5
PUDP-204	ENST00000486446	LYG1	Q8N1E2	194 aa		5.7	□□□□□ -1.5
PUDP-204	ENST00000486446	HIST3H2BB	Q8N257	126 aa		5.7	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms