RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 HYDINQ4G0P3 5121 aa14.4□□□□□ -0.1
SNX5-213ENST00000486039 K7EQG2 157 aa14.4□□□□□ -0.1
SNX5-213ENST00000486039 LYRM1O43325 122 aa14.4□□□□□ -0.1
SNX5-213ENST00000486039 SPRY2O43597 315 aa14.4□□□□□ -0.1
SNX5-213ENST00000486039 DEFB131AP59861 70 aa14.4□□□□□ -0.1
SNX5-213ENST00000486039 ID3Q02535 119 aa14.4□□□□□ -0.1
SNX5-213ENST00000486039 ZNF90Q03938 601 aa14.4□□□□□ -0.1
SNX5-213ENST00000486039 C4orf46Q504U0 113 aa14.4□□□□□ -0.1
SNX5-213ENST00000486039 LEMD1Q68G75 181 aa14.4□□□□□ -0.1
SNX5-213ENST00000486039 STPG3Q8N7X2 389 aa14.4□□□□□ -0.1
SNX5-213ENST00000486039 STXBP6Q8NFX7 210 aa14.4□□□□□ -0.1
SNX5-213ENST00000486039 GLMPQ8WWB7 406 aa14.4□□□□□ -0.1
SNX5-213ENST00000486039 SLC35E1Q96K37 410 aa14.4□□□□□ -0.1
SNX5-213ENST00000486039 TP53TG1Q9Y2A0 90 aa14.4□□□□□ -0.1
SNX5-213ENST00000486039 ZFP92A6NM28 416 aa14.39□□□□□ -0.11
SNX5-213ENST00000486039 PRSS46E5RG02 174 aa14.39□□□□□ -0.11
SNX5-213ENST00000486039 OR51G1Q8NGK1 321 aa14.39□□□□□ -0.11
SNX5-213ENST00000486039 OR4D5Q8NGN0 318 aa14.39□□□□□ -0.11
SNX5-213ENST00000486039 DCANP1Q8TF63 244 aa14.39□□□□□ -0.11
SNX5-213ENST00000486039 BUB3O43684 328 aa14.38□□□□□ -0.11
SNX5-213ENST00000486039 POLR2GP62487 172 aaKnown RBP eCLIP14.38□□□□□ -0.11
SNX5-213ENST00000486039 RPP30P78346 268 aaKnown RBP14.38□□□□□ -0.11
SNX5-213ENST00000486039 CNPY1Q3B7I2 92 aa14.38□□□□□ -0.11
SNX5-213ENST00000486039 SPANXN5Q5MJ07 72 aa14.38□□□□□ -0.11
SNX5-213ENST00000486039 IL17DQ8TAD2 202 aa14.38□□□□□ -0.11
SNX5-213ENST00000486039 RNF183Q96D59 192 aa14.38□□□□□ -0.11
SNX5-213ENST00000486039 RNF125Q96EQ8 232 aa14.38□□□□□ -0.11
SNX5-213ENST00000486039 CSTL1Q9H114 145 aa14.38□□□□□ -0.11
SNX5-213ENST00000486039 C20orf85Q9H1P6 137 aa14.38□□□□□ -0.11
SNX5-213ENST00000486039 IGKV1OR2-108A0A075B7D4 117 aa14.37□□□□□ -0.11
SNX5-213ENST00000486039 HELTA6NFD8 242 aa14.37□□□□□ -0.11
SNX5-213ENST00000486039 H3BP45 60 aa14.37□□□□□ -0.11
SNX5-213ENST00000486039 IFNA21P01568 189 aa14.37□□□□□ -0.11
SNX5-213ENST00000486039 CCDC32Q9BV29 185 aa14.37□□□□□ -0.11
SNX5-213ENST00000486039 A6NHS1 94 aa14.36□□□□□ -0.11
SNX5-213ENST00000486039 TCRBP04435 133 aa14.36□□□□□ -0.11
SNX5-213ENST00000486039 NKX2-1P43699 371 aaPredicted RBP14.36□□□□□ -0.11
SNX5-213ENST00000486039 LINC00299Q6ZSB3 139 aa14.36□□□□□ -0.11
SNX5-213ENST00000486039 THAP8Q8NA92 274 aa14.36□□□□□ -0.11
SNX5-213ENST00000486039 MITD1Q8WV92 249 aa14.36□□□□□ -0.11
SNX5-213ENST00000486039 TRGV9Q99603 122 aa14.36□□□□□ -0.11
SNX5-213ENST00000486039 PBDC1Q9BVG4 233 aa14.36□□□□□ -0.11
SNX5-213ENST00000486039 BATF3Q9NR55 127 aa14.36□□□□□ -0.11
SNX5-213ENST00000486039 ZNF688P0C7X2 276 aa14.35□□□□□ -0.11
SNX5-213ENST00000486039 EIF2B2P49770 351 aaKnown RBP14.35□□□□□ -0.11
SNX5-213ENST00000486039 AP2S1P53680 142 aaPredicted RBP14.35□□□□□ -0.11
SNX5-213ENST00000486039 OR2F1Q13607 317 aa14.35□□□□□ -0.11
SNX5-213ENST00000486039 STRAPQ9Y3F4 350 aaKnown RBP14.35□□□□□ -0.11
SNX5-213ENST00000486039 TRAV6A0A075B6T7 132 aa14.34□□□□□ -0.11
SNX5-213ENST00000486039 A0A0J9YWU9 116 aa14.34□□□□□ -0.11
SNX5-213ENST00000486039 OR8G2PQ6IF36 304 aa14.34□□□□□ -0.11
SNX5-213ENST00000486039 PSENENQ9NZ42 101 aa14.34□□□□□ -0.11
SNX5-213ENST00000486039 PMS2P5A8MQ11 134 aa14.33□□□□□ -0.12
SNX5-213ENST00000486039 SNRPGP15A8MWD9 76 aa14.33□□□□□ -0.12
SNX5-213ENST00000486039 SSSCA1O60232 199 aa14.33□□□□□ -0.12
SNX5-213ENST00000486039 PAX9P55771 341 aa14.33□□□□□ -0.12
SNX5-213ENST00000486039 LYZP61626 148 aa14.33□□□□□ -0.12
SNX5-213ENST00000486039 EWSR1Q01844 656 aaKnown RBP eCLIP14.33□□□□□ -0.12
SNX5-213ENST00000486039 IAH1Q2TAA2 248 aaPredicted RBP14.33□□□□□ -0.12
SNX5-213ENST00000486039 SIGLEC15Q6ZMC9 328 aa14.33□□□□□ -0.12
SNX5-213ENST00000486039 KNCNA6PVL3 124 aa14.32□□□□□ -0.12
SNX5-213ENST00000486039 FABP1P07148 127 aa14.32□□□□□ -0.12
SNX5-213ENST00000486039 ACOT7LQ6ZUV0 252 aa14.32□□□□□ -0.12
SNX5-213ENST00000486039 STHQ8IWL8 128 aa14.32□□□□□ -0.12
SNX5-213ENST00000486039 ZBTB8BQ8NAP8 495 aaPredicted RBP14.32□□□□□ -0.12
SNX5-213ENST00000486039 SMIM8Q96KF7 97 aa14.32□□□□□ -0.12
SNX5-213ENST00000486039 NRN1Q9NPD7 142 aa14.32□□□□□ -0.12
SNX5-213ENST00000486039 NUDT15Q9NV35 164 aa14.32□□□□□ -0.12
SNX5-213ENST00000486039 JTBO76095 146 aa14.31□□□□□ -0.12
SNX5-213ENST00000486039 SCGB1D2O95969 90 aa14.31□□□□□ -0.12
SNX5-213ENST00000486039 CA1P00915 261 aaPredicted RBP14.31□□□□□ -0.12
SNX5-213ENST00000486039 TMEM182Q6ZP80 229 aaPredicted RBP14.31□□□□□ -0.12
SNX5-213ENST00000486039 TRPT1Q86TN4 253 aaKnown RBP14.31□□□□□ -0.12
SNX5-213ENST00000486039 S100ZQ8WXG8 99 aa14.31□□□□□ -0.12
SNX5-213ENST00000486039 SEC22CQ9BRL7 303 aa14.31□□□□□ -0.12
SNX5-213ENST00000486039 GSKIPQ9P0R6 139 aa14.31□□□□□ -0.12
SNX5-213ENST00000486039 TBC1D24Q9ULP9 559 aa14.31□□□□□ -0.12
SNX5-213ENST00000486039 CCSO14618 274 aa14.3□□□□□ -0.12
SNX5-213ENST00000486039 CCNKO75909 580 aa14.3□□□□□ -0.12
SNX5-213ENST00000486039 GATA2P23769 480 aaPredicted RBP14.3□□□□□ -0.12
SNX5-213ENST00000486039 NUP62P37198 522 aaPredicted RBP14.3□□□□□ -0.12
SNX5-213ENST00000486039 PSMG4Q5JS54 123 aa14.3□□□□□ -0.12
SNX5-213ENST00000486039 TMEM14EPQ6UXP3 125 aa14.3□□□□□ -0.12
SNX5-213ENST00000486039 GATAD1Q8WUU5 269 aa14.3□□□□□ -0.12
SNX5-213ENST00000486039 RCL1Q9Y2P8 373 aaKnown RBP14.3□□□□□ -0.12
SNX5-213ENST00000486039 GIG44P09565 113 aaPredicted RBP14.29□□□□□ -0.12
SNX5-213ENST00000486039 H2AFB2P0C5Z0 115 aa14.29□□□□□ -0.12
SNX5-213ENST00000486039 AKR1C1Q04828 323 aa14.29□□□□□ -0.12
SNX5-213ENST00000486039 ACTL10Q5JWF8 245 aa14.29□□□□□ -0.12
SNX5-213ENST00000486039 TMEM144Q7Z5S9 345 aa14.29□□□□□ -0.12
SNX5-213ENST00000486039 ZNF431Q8TF32 576 aaPredicted RBP14.29□□□□□ -0.12
SNX5-213ENST00000486039 RAB40CQ96S21 281 aa14.29□□□□□ -0.12
SNX5-213ENST00000486039 RARRES2Q99969 163 aa14.29□□□□□ -0.12
SNX5-213ENST00000486039 SEPSECSQ9HD40 501 aaKnown RBP14.29□□□□□ -0.12
SNX5-213ENST00000486039 PFDN2Q9UHV9 154 aa14.29□□□□□ -0.12
SNX5-213ENST00000486039 FAM240BA0A1B0GVZ2 78 aa14.28□□□□□ -0.12
SNX5-213ENST00000486039 CFDP00746 253 aaPredicted RBP14.28□□□□□ -0.12
SNX5-213ENST00000486039 MBPP02686 304 aaPredicted RBP14.28□□□□□ -0.12
SNX5-213ENST00000486039 C1orf194Q5T5A4 169 aa14.28□□□□□ -0.12
SNX5-213ENST00000486039 ALMS1Q8TCU4 4167 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms