RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 PARVBQ9HBI1 364 aa0.64□□□□□ -2.31
GCFC2-209ENST00000486016 ZFP30Q9Y2G7 519 aa0.64□□□□□ -2.31
GCFC2-209ENST00000486016 EXPH5Q8NEV8 1989 aa0.64□□□□□ -2.31
GCFC2-209ENST00000486016 TNRC6BQ9UPQ9 1833 aaKnown RBP0.64□□□□□ -2.31
GCFC2-209ENST00000486016 SCN10AQ9Y5Y9 1956 aa0.63□□□□□ -2.31
GCFC2-209ENST00000486016 TRAV4A0A0B4J268 109 aa0.63□□□□□ -2.31
GCFC2-209ENST00000486016 FAM159BA6NKW6 160 aa0.63□□□□□ -2.31
GCFC2-209ENST00000486016 TMEM210A6NLX4 147 aa0.63□□□□□ -2.31
GCFC2-209ENST00000486016 CYBAP13498 195 aa0.63□□□□□ -2.31
GCFC2-209ENST00000486016 RNASE4P34096 147 aaKnown RBP0.63□□□□□ -2.31
GCFC2-209ENST00000486016 EIF5AP63241 154 aaKnown RBP0.63□□□□□ -2.31
GCFC2-209ENST00000486016 AKIRIN2Q53H80 203 aa0.63□□□□□ -2.31
GCFC2-209ENST00000486016 LYRM7Q5U5X0 104 aa0.63□□□□□ -2.31
GCFC2-209ENST00000486016 Q8N814 137 aa0.63□□□□□ -2.31
GCFC2-209ENST00000486016 OR11H6Q8NGC7 330 aa0.63□□□□□ -2.31
GCFC2-209ENST00000486016 OR2T10Q8NGZ9 312 aa0.63□□□□□ -2.31
GCFC2-209ENST00000486016 STAG3L4Q8TBR4 150 aa0.63□□□□□ -2.31
GCFC2-209ENST00000486016 SLAMF6Q96DU3 332 aa0.63□□□□□ -2.31
GCFC2-209ENST00000486016 C6orf62Q9GZU0 229 aaPredicted RBP0.63□□□□□ -2.31
GCFC2-209ENST00000486016 BCL2L10Q9HD36 194 aa0.63□□□□□ -2.31
GCFC2-209ENST00000486016 ACER3Q9NUN7 267 aa0.63□□□□□ -2.31
GCFC2-209ENST00000486016 FAM32AQ9Y421 112 aaKnown RBP0.63□□□□□ -2.31
GCFC2-209ENST00000486016 ROS1P08922 2347 aa0.63□□□□□ -2.31
GCFC2-209ENST00000486016 PCF11O94913 1555 aaKnown RBP0.62□□□□□ -2.31
GCFC2-209ENST00000486016 M0R2N4 97 aa0.62□□□□□ -2.31
GCFC2-209ENST00000486016 GADD45GO95257 159 aa0.62□□□□□ -2.31
GCFC2-209ENST00000486016 CST2P09228 141 aa0.62□□□□□ -2.31
GCFC2-209ENST00000486016 SRP14P37108 136 aaKnown RBP0.62□□□□□ -2.31
GCFC2-209ENST00000486016 ANP32AP39687 249 aaKnown RBP0.62□□□□□ -2.31
GCFC2-209ENST00000486016 ATP5G3P48201 142 aa0.62□□□□□ -2.31
GCFC2-209ENST00000486016 PIGPP57054 158 aa0.62□□□□□ -2.31
GCFC2-209ENST00000486016 DYNLT1P63172 113 aa0.62□□□□□ -2.31
GCFC2-209ENST00000486016 PRB3Q04118 309 aaPredicted RBP0.62□□□□□ -2.31
GCFC2-209ENST00000486016 TEX261Q6UWH6 196 aa0.62□□□□□ -2.31
GCFC2-209ENST00000486016 S100A7AQ86SG5 101 aa0.62□□□□□ -2.31
GCFC2-209ENST00000486016 Q8IYB0 196 aa0.62□□□□□ -2.31
GCFC2-209ENST00000486016 CLECL1Q8IZS7 167 aa0.62□□□□□ -2.31
GCFC2-209ENST00000486016 LINC00301Q8NCQ3 95 aa0.62□□□□□ -2.31
GCFC2-209ENST00000486016 SLC30A7Q8NEW0 376 aa0.62□□□□□ -2.31
GCFC2-209ENST00000486016 TEX47Q8TBZ9 253 aa0.62□□□□□ -2.31
GCFC2-209ENST00000486016 LINC00526Q96FQ7 95 aa0.62□□□□□ -2.31
GCFC2-209ENST00000486016 PRADC1Q9BSG0 188 aa0.62□□□□□ -2.31
GCFC2-209ENST00000486016 ENY2Q9NPA8 101 aa0.62□□□□□ -2.31
GCFC2-209ENST00000486016 C14orf132Q9NPU4 83 aa0.62□□□□□ -2.31
GCFC2-209ENST00000486016 RASL12Q9NYN1 266 aa0.62□□□□□ -2.31
GCFC2-209ENST00000486016 ARL2BPQ9Y2Y0 163 aa0.62□□□□□ -2.31
GCFC2-209ENST00000486016 U3KQ87 197 aa0.62□□□□□ -2.31
GCFC2-209ENST00000486016 SBF1O95248 1867 aa0.62□□□□□ -2.31
GCFC2-209ENST00000486016 FMN1Q68DA7 1419 aa0.62□□□□□ -2.31
GCFC2-209ENST00000486016 NCOA6Q14686 2063 aaPredicted RBP0.61□□□□□ -2.31
GCFC2-209ENST00000486016 RIMBP3CA6NJZ7 1639 aa0.61□□□□□ -2.31
GCFC2-209ENST00000486016 RIMBP3BA6NNM3 1639 aa0.61□□□□□ -2.31
GCFC2-209ENST00000486016 RIMBP3Q9UFD9 1639 aa0.61□□□□□ -2.31
GCFC2-209ENST00000486016 TRBV19A0A075B6N1 114 aa0.61□□□□□ -2.31
GCFC2-209ENST00000486016 CCDC160A6NGH7 325 aa0.61□□□□□ -2.31
GCFC2-209ENST00000486016 ZNF736B4DX44 427 aaPredicted RBP0.61□□□□□ -2.31
GCFC2-209ENST00000486016 INE1O15225 51 aa0.61□□□□□ -2.31
GCFC2-209ENST00000486016 SERPINA1P01009 418 aa0.61□□□□□ -2.31
GCFC2-209ENST00000486016 HSD11B1P28845 292 aa0.61□□□□□ -2.31
GCFC2-209ENST00000486016 KRR1Q13601 381 aaKnown RBP0.61□□□□□ -2.31
GCFC2-209ENST00000486016 RRN3P1Q2M238 152 aa0.61□□□□□ -2.31
GCFC2-209ENST00000486016 SOSTDC1Q6X4U4 206 aa0.61□□□□□ -2.31
GCFC2-209ENST00000486016 GOLT1AQ6ZVE7 132 aa0.61□□□□□ -2.31
GCFC2-209ENST00000486016 OR10X1Q8NGY0 326 aa0.61□□□□□ -2.31
GCFC2-209ENST00000486016 CHMP6Q96FZ7 201 aa0.61□□□□□ -2.31
GCFC2-209ENST00000486016 C9orf16Q9BUW7 83 aa0.61□□□□□ -2.31
GCFC2-209ENST00000486016 CDC42SE1Q9NRR8 79 aa0.61□□□□□ -2.31
GCFC2-209ENST00000486016 OPTCQ9UBM4 332 aa0.61□□□□□ -2.31
GCFC2-209ENST00000486016 ADGRB2O60241 1585 aa0.61□□□□□ -2.31
GCFC2-209ENST00000486016 EML6Q6ZMW3 1958 aa0.61□□□□□ -2.31
GCFC2-209ENST00000486016 ARHGEF28Q8N1W1 1705 aaKnown RBP0.61□□□□□ -2.31
GCFC2-209ENST00000486016 DOCK3Q8IZD9 2030 aa0.6□□□□□ -2.31
GCFC2-209ENST00000486016 HMGB3O15347 200 aaKnown RBP0.6□□□□□ -2.31
GCFC2-209ENST00000486016 TIMM17BO60830 172 aa0.6□□□□□ -2.31
GCFC2-209ENST00000486016 CAPZBP47756 277 aa0.6□□□□□ -2.31
GCFC2-209ENST00000486016 GDF5OSQ5U4N7 250 aa0.6□□□□□ -2.31
GCFC2-209ENST00000486016 C22orf39Q6P5X5 142 aa0.6□□□□□ -2.31
GCFC2-209ENST00000486016 PDZD9Q8IXQ8 264 aa0.6□□□□□ -2.31
GCFC2-209ENST00000486016 TMEM126AQ9H061 195 aa0.6□□□□□ -2.31
GCFC2-209ENST00000486016 CEP192Q8TEP8 1941 aa0.6□□□□□ -2.31
GCFC2-209ENST00000486016 TAF1LQ8IZX4 1826 aa0.59□□□□□ -2.31
GCFC2-209ENST00000486016 AHNAKQ09666 5890 aaKnown RBP0.59□□□□□ -2.31
GCFC2-209ENST00000486016 ADGRL3Q9HAR2 1447 aa0.59□□□□□ -2.31
GCFC2-209ENST00000486016 TRGV10A0A0A0MS01 117 aa0.59□□□□□ -2.31
GCFC2-209ENST00000486016 TAX1BP3O14907 124 aa0.59□□□□□ -2.31
GCFC2-209ENST00000486016 NDUFB3O43676 98 aa0.59□□□□□ -2.31
GCFC2-209ENST00000486016 ATP5HO75947 161 aa0.59□□□□□ -2.31
GCFC2-209ENST00000486016 DHFRP00374 187 aa0.59□□□□□ -2.31
GCFC2-209ENST00000486016 ZNF25P17030 456 aaPredicted RBP0.59□□□□□ -2.31
GCFC2-209ENST00000486016 HSPE1P61604 102 aaKnown RBP0.59□□□□□ -2.31
GCFC2-209ENST00000486016 MRPS25P82663 173 aaKnown RBP0.59□□□□□ -2.31
GCFC2-209ENST00000486016 TAF1AQ15573 450 aaPredicted RBP0.59□□□□□ -2.31
GCFC2-209ENST00000486016 MPV17LQ2QL34 196 aa0.59□□□□□ -2.31
GCFC2-209ENST00000486016 C4orf3Q8WVX3 66 aa0.59□□□□□ -2.31
GCFC2-209ENST00000486016 YPEL2Q96QA6 119 aa0.59□□□□□ -2.31
GCFC2-209ENST00000486016 PHB2Q99623 299 aa0.59□□□□□ -2.31
GCFC2-209ENST00000486016 IMUPQ9GZP8 106 aa0.59□□□□□ -2.31
GCFC2-209ENST00000486016 ARMC1Q9NVT9 282 aa0.59□□□□□ -2.31
GCFC2-209ENST00000486016 CHCHD2Q9Y6H1 151 aaPredicted RBP0.59□□□□□ -2.31
GCFC2-209ENST00000486016 DENND4CQ5VZ89 1909 aa0.59□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms