RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 BTCP35070 178 aa5.17□□□□□ -1.58
VPS50-218ENST00000485994 RND2P52198 227 aa5.17□□□□□ -1.58
VPS50-218ENST00000485994 RAB11AP62491 216 aa5.17□□□□□ -1.58
VPS50-218ENST00000485994 RPP30P78346 268 aaKnown RBP5.17□□□□□ -1.58
VPS50-218ENST00000485994 IFITM3Q01628 133 aa5.17□□□□□ -1.58
VPS50-218ENST00000485994 ID3Q02535 119 aa5.17□□□□□ -1.58
VPS50-218ENST00000485994 C16orf54Q6UWD8 224 aa5.17□□□□□ -1.58
VPS50-218ENST00000485994 TCF24Q7RTU0 167 aa5.17□□□□□ -1.58
VPS50-218ENST00000485994 OR1S1Q8NH92 325 aa5.17□□□□□ -1.58
VPS50-218ENST00000485994 GATAD1Q8WUU5 269 aa5.17□□□□□ -1.58
VPS50-218ENST00000485994 ST8SIA2Q92186 375 aa5.17□□□□□ -1.58
VPS50-218ENST00000485994 NPIPB3Q92617 1050 aa5.17□□□□□ -1.58
VPS50-218ENST00000485994 NARS2Q96I59 477 aaKnown RBP5.17□□□□□ -1.58
VPS50-218ENST00000485994 CSTL1Q9H114 145 aa5.17□□□□□ -1.58
VPS50-218ENST00000485994 MS4A6AQ9H2W1 248 aa5.17□□□□□ -1.58
VPS50-218ENST00000485994 RBKSQ9H477 322 aa5.17□□□□□ -1.58
VPS50-218ENST00000485994 PLECQ15149 4684 aaKnown RBP5.16□□□□□ -1.58
VPS50-218ENST00000485994 C9orf170A2RU37 121 aa5.16□□□□□ -1.58
VPS50-218ENST00000485994 HELTA6NFD8 242 aa5.16□□□□□ -1.58
VPS50-218ENST00000485994 K7EQG2 157 aa5.16□□□□□ -1.58
VPS50-218ENST00000485994 DNASE2O00115 360 aaPredicted RBP5.16□□□□□ -1.58
VPS50-218ENST00000485994 SPRY2O43597 315 aa5.16□□□□□ -1.58
VPS50-218ENST00000485994 BUB3O43684 328 aa5.16□□□□□ -1.58
VPS50-218ENST00000485994 SYNGR2O43760 224 aa5.16□□□□□ -1.58
VPS50-218ENST00000485994 CFDP00746 253 aaPredicted RBP5.16□□□□□ -1.58
VPS50-218ENST00000485994 IFNA4P05014 189 aa5.16□□□□□ -1.58
VPS50-218ENST00000485994 HNRNPCP07910 306 aaKnown RBP eCLIP5.16□□□□□ -1.58
VPS50-218ENST00000485994 RD3LP0DJH9 198 aa5.16□□□□□ -1.58
VPS50-218ENST00000485994 NUP62P37198 522 aaPredicted RBP5.16□□□□□ -1.58
VPS50-218ENST00000485994 INPP1P49441 399 aa5.16□□□□□ -1.58
VPS50-218ENST00000485994 EIF2B2P49770 351 aaKnown RBP5.16□□□□□ -1.58
VPS50-218ENST00000485994 PPP1R1AQ13522 171 aa5.16□□□□□ -1.58
VPS50-218ENST00000485994 GAMTQ14353 236 aa5.16□□□□□ -1.58
VPS50-218ENST00000485994 TIGITQ495A1 244 aa5.16□□□□□ -1.58
VPS50-218ENST00000485994 TMEM41BQ5BJD5 291 aa5.16□□□□□ -1.58
VPS50-218ENST00000485994 OR8G2PQ6IF36 304 aa5.16□□□□□ -1.58
VPS50-218ENST00000485994 TMED4Q7Z7H5 227 aa5.16□□□□□ -1.58
VPS50-218ENST00000485994 OR51G1Q8NGK1 321 aa5.16□□□□□ -1.58
VPS50-218ENST00000485994 DCANP1Q8TF63 244 aa5.16□□□□□ -1.58
VPS50-218ENST00000485994 PRR13Q9NZ81 148 aa5.16□□□□□ -1.58
VPS50-218ENST00000485994 UBQLN2Q9UHD9 624 aa5.16□□□□□ -1.58
VPS50-218ENST00000485994 PFDN2Q9UHV9 154 aa5.16□□□□□ -1.58
VPS50-218ENST00000485994 SELENOKQ9Y6D0 94 aa5.16□□□□□ -1.58
VPS50-218ENST00000485994 DNAH1Q9P2D7 4330 aa5.16□□□□□ -1.58
VPS50-218ENST00000485994 RYR2Q92736 4967 aa5.15□□□□□ -1.58
VPS50-218ENST00000485994 IGKV1D-37A0A075B6S9 117 aa5.15□□□□□ -1.59
VPS50-218ENST00000485994 IGHV3OR16-13A0A075B7E8 117 aa5.15□□□□□ -1.59
VPS50-218ENST00000485994 IGHV3-49A0A0A0MS15 119 aa5.15□□□□□ -1.59
VPS50-218ENST00000485994 IGHV3-74A0A0B4J1X5 117 aa5.15□□□□□ -1.59
VPS50-218ENST00000485994 MPTX1A8MV57 137 aa5.15□□□□□ -1.59
VPS50-218ENST00000485994 PRSS46E5RG02 174 aa5.15□□□□□ -1.59
VPS50-218ENST00000485994 FABP1P07148 127 aa5.15□□□□□ -1.59
VPS50-218ENST00000485994 OR4E1P0C645 316 aa5.15□□□□□ -1.59
VPS50-218ENST00000485994 PSG1P11464 419 aa5.15□□□□□ -1.59
VPS50-218ENST00000485994 VAMP1P23763 118 aa5.15□□□□□ -1.59
VPS50-218ENST00000485994 P2RY1P47900 373 aa5.15□□□□□ -1.59
VPS50-218ENST00000485994 TAS2R30P59541 319 aa5.15□□□□□ -1.59
VPS50-218ENST00000485994 C1orf194Q5T5A4 169 aa5.15□□□□□ -1.59
VPS50-218ENST00000485994 LCE5AQ5TCM9 118 aa5.15□□□□□ -1.59
VPS50-218ENST00000485994 GGNBP1Q5YKI7 109 aa5.15□□□□□ -1.59
VPS50-218ENST00000485994 TRIQKQ629K1 86 aa5.15□□□□□ -1.59
VPS50-218ENST00000485994 LYG2Q86SG7 212 aa5.15□□□□□ -1.59
VPS50-218ENST00000485994 GBGT1Q8N5D6 347 aa5.15□□□□□ -1.59
VPS50-218ENST00000485994 THAP8Q8NA92 274 aa5.15□□□□□ -1.59
VPS50-218ENST00000485994 GLMPQ8WWB7 406 aa5.15□□□□□ -1.59
VPS50-218ENST00000485994 S100ZQ8WXG8 99 aa5.15□□□□□ -1.59
VPS50-218ENST00000485994 TRGV9Q99603 122 aa5.15□□□□□ -1.59
VPS50-218ENST00000485994 RETNQ9HD89 108 aa5.15□□□□□ -1.59
VPS50-218ENST00000485994 SLC45A2Q9UMX9 530 aa5.15□□□□□ -1.59
VPS50-218ENST00000485994 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.15□□□□□ -1.59
VPS50-218ENST00000485994 LCE6AA0A183 80 aa5.14□□□□□ -1.59
VPS50-218ENST00000485994 SNRPGP15A8MWD9 76 aa5.14□□□□□ -1.59
VPS50-218ENST00000485994 FNDC10F2Z333 226 aa5.14□□□□□ -1.59
VPS50-218ENST00000485994 IFNA21P01568 189 aa5.14□□□□□ -1.59
VPS50-218ENST00000485994 IL4P05112 153 aa5.14□□□□□ -1.59
VPS50-218ENST00000485994 HOXB5P09067 269 aa5.14□□□□□ -1.59
VPS50-218ENST00000485994 DEFB131AP59861 70 aa5.14□□□□□ -1.59
VPS50-218ENST00000485994 DHRS2Q13268 280 aa5.14□□□□□ -1.59
VPS50-218ENST00000485994 ZNF846Q147U1 533 aa5.14□□□□□ -1.59
VPS50-218ENST00000485994 USF2Q15853 346 aaPredicted RBP5.14□□□□□ -1.59
VPS50-218ENST00000485994 APRG1Q8IVJ8 170 aa5.14□□□□□ -1.59
VPS50-218ENST00000485994 OR4D5Q8NGN0 318 aa5.14□□□□□ -1.59
VPS50-218ENST00000485994 COQ8AQ8NI60 647 aa5.14□□□□□ -1.59
VPS50-218ENST00000485994 MITD1Q8WV92 249 aa5.14□□□□□ -1.59
VPS50-218ENST00000485994 SLC35E1Q96K37 410 aa5.14□□□□□ -1.59
VPS50-218ENST00000485994 SMIM8Q96KF7 97 aa5.14□□□□□ -1.59
VPS50-218ENST00000485994 CCDC32Q9BV29 185 aa5.14□□□□□ -1.59
VPS50-218ENST00000485994 FBXL17Q9UF56 701 aa5.14□□□□□ -1.59
VPS50-218ENST00000485994 RABAC1Q9UI14 185 aa5.14□□□□□ -1.59
VPS50-218ENST00000485994 TBC1D24Q9ULP9 559 aa5.14□□□□□ -1.59
VPS50-218ENST00000485994 IGKV3-7A0A075B6H7 116 aa5.13□□□□□ -1.59
VPS50-218ENST00000485994 IGKV1OR2-108A0A075B7D4 117 aa5.13□□□□□ -1.59
VPS50-218ENST00000485994 LINC00854A0A1B0GVQ3 168 aa5.13□□□□□ -1.59
VPS50-218ENST00000485994 ZFP92A6NM28 416 aa5.13□□□□□ -1.59
VPS50-218ENST00000485994 PMS2P5A8MQ11 134 aa5.13□□□□□ -1.59
VPS50-218ENST00000485994 WRBO00258 174 aa5.13□□□□□ -1.59
VPS50-218ENST00000485994 UPK1BO75841 260 aa5.13□□□□□ -1.59
VPS50-218ENST00000485994 TCRBP04435 133 aa5.13□□□□□ -1.59
VPS50-218ENST00000485994 SPP1P10451 314 aa5.13□□□□□ -1.59
VPS50-218ENST00000485994 S100A7P31151 101 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms