RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 SMCO1Q147U7 214 aa9.98□□□□□ -0.81
SCAF4-206ENST00000485790 SIGLEC15Q6ZMC9 328 aa9.98□□□□□ -0.81
SCAF4-206ENST00000485790 OR51G1Q8NGK1 321 aa9.98□□□□□ -0.81
SCAF4-206ENST00000485790 DTD1Q8TEA8 209 aa9.98□□□□□ -0.81
SCAF4-206ENST00000485790 RAB2BQ8WUD1 216 aa9.98□□□□□ -0.81
SCAF4-206ENST00000485790 CLEC5AQ9NY25 188 aa9.98□□□□□ -0.81
SCAF4-206ENST00000485790 SHPKQ9UHJ6 478 aa9.98□□□□□ -0.81
SCAF4-206ENST00000485790 APLNQ9ULZ1 77 aa9.98□□□□□ -0.81
SCAF4-206ENST00000485790 ANKRD20A5PA0PJZ0 165 aa9.97□□□□□ -0.81
SCAF4-206ENST00000485790 NOL3O60936 208 aaKnown RBP9.97□□□□□ -0.81
SCAF4-206ENST00000485790 SMIM18P0DKX4 95 aa9.97□□□□□ -0.81
SCAF4-206ENST00000485790 TMBIM6P55061 237 aa9.97□□□□□ -0.81
SCAF4-206ENST00000485790 SPCS2Q15005 226 aa9.97□□□□□ -0.81
SCAF4-206ENST00000485790 USF2Q15853 346 aaPredicted RBP9.97□□□□□ -0.81
SCAF4-206ENST00000485790 CSNK1G2-AS1Q8NCQ2 148 aa9.97□□□□□ -0.81
SCAF4-206ENST00000485790 OR1S1Q8NH92 325 aa9.97□□□□□ -0.81
SCAF4-206ENST00000485790 BCL7BQ9BQE9 202 aa9.97□□□□□ -0.81
SCAF4-206ENST00000485790 PBDC1Q9BVG4 233 aa9.97□□□□□ -0.81
SCAF4-206ENST00000485790 HSPB7Q9UBY9 170 aa9.97□□□□□ -0.81
SCAF4-206ENST00000485790 X6R8D5 127 aa9.97□□□□□ -0.81
SCAF4-206ENST00000485790 H3BMM0 161 aa9.96□□□□□ -0.82
SCAF4-206ENST00000485790 NXPH3O95157 252 aa9.96□□□□□ -0.82
SCAF4-206ENST00000485790 FAUP35544 74 aaKnown RBP9.96□□□□□ -0.82
SCAF4-206ENST00000485790 NKX2-1P43699 371 aaPredicted RBP9.96□□□□□ -0.82
SCAF4-206ENST00000485790 ALDH3B2P48448 385 aa9.96□□□□□ -0.82
SCAF4-206ENST00000485790 RAB11AP62491 216 aa9.96□□□□□ -0.82
SCAF4-206ENST00000485790 RPP30P78346 268 aaKnown RBP9.96□□□□□ -0.82
SCAF4-206ENST00000485790 C1orf194Q5T5A4 169 aa9.96□□□□□ -0.82
SCAF4-206ENST00000485790 OR8G2PQ6IF36 304 aa9.96□□□□□ -0.82
SCAF4-206ENST00000485790 LYZL2Q7Z4W2 148 aa9.96□□□□□ -0.82
SCAF4-206ENST00000485790 RNF125Q96EQ8 232 aa9.96□□□□□ -0.82
SCAF4-206ENST00000485790 SLC35E1Q96K37 410 aa9.96□□□□□ -0.82
SCAF4-206ENST00000485790 LINC00052Q96N35 136 aa9.96□□□□□ -0.82
SCAF4-206ENST00000485790 RNF126Q9BV68 326 aa9.96□□□□□ -0.82
SCAF4-206ENST00000485790 RBKSQ9H477 322 aa9.96□□□□□ -0.82
SCAF4-206ENST00000485790 CCDC59Q9P031 241 aaKnown RBP9.96□□□□□ -0.82
SCAF4-206ENST00000485790 XCL2Q9UBD3 114 aa9.96□□□□□ -0.82
SCAF4-206ENST00000485790 TMEM189A5PLL7 270 aa9.95□□□□□ -0.82
SCAF4-206ENST00000485790 SMIM9A6NGZ8 99 aa9.95□□□□□ -0.82
SCAF4-206ENST00000485790 CFDP00746 253 aaPredicted RBP9.95□□□□□ -0.82
SCAF4-206ENST00000485790 C4BPBP20851 252 aa9.95□□□□□ -0.82
SCAF4-206ENST00000485790 S100A7P31151 101 aa9.95□□□□□ -0.82
SCAF4-206ENST00000485790 AP3S2P59780 193 aa9.95□□□□□ -0.82
SCAF4-206ENST00000485790 SAMD13Q5VXD3 122 aa9.95□□□□□ -0.82
SCAF4-206ENST00000485790 SPATA31B1PQ5VZV4 182 aa9.95□□□□□ -0.82
SCAF4-206ENST00000485790 Q6ZTC4 211 aa9.95□□□□□ -0.82
SCAF4-206ENST00000485790 TMEM170AQ8WVE7 144 aa9.95□□□□□ -0.82
SCAF4-206ENST00000485790 PPP1R14BQ96C90 147 aa9.95□□□□□ -0.82
SCAF4-206ENST00000485790 IGHV4-4A0A075B6R2 117 aa9.94□□□□□ -0.82
SCAF4-206ENST00000485790 ELOA3CA0A087WX78 387 aaPredicted RBP9.94□□□□□ -0.82
SCAF4-206ENST00000485790 DEFB131BA0A096LNP1 70 aa9.94□□□□□ -0.82
SCAF4-206ENST00000485790 MED6O75586 246 aa9.94□□□□□ -0.82
SCAF4-206ENST00000485790 SPART-AS1P0CW21 52 aa9.94□□□□□ -0.82
SCAF4-206ENST00000485790 GAMTQ14353 236 aa9.94□□□□□ -0.82
SCAF4-206ENST00000485790 EBLN2Q6P2I7 272 aa9.94□□□□□ -0.82
SCAF4-206ENST00000485790 COQ8AQ8NI60 647 aa9.94□□□□□ -0.82
SCAF4-206ENST00000485790 DYNC2LI1Q8TCX1 351 aa9.94□□□□□ -0.82
SCAF4-206ENST00000485790 BOLA1Q9Y3E2 137 aa9.94□□□□□ -0.82
SCAF4-206ENST00000485790 DUXBA0A1W2PPF3 345 aa9.93□□□□□ -0.82
SCAF4-206ENST00000485790 P0DMU3 169 aa9.93□□□□□ -0.82
SCAF4-206ENST00000485790 FAM231AP0DMU4 169 aa9.93□□□□□ -0.82
SCAF4-206ENST00000485790 FAM231CP0DMU5 169 aa9.93□□□□□ -0.82
SCAF4-206ENST00000485790 HLA-DRB4P13762 266 aa9.93□□□□□ -0.82
SCAF4-206ENST00000485790 TNFSF8P32971 234 aa9.93□□□□□ -0.82
SCAF4-206ENST00000485790 PRR20EP86478 221 aa9.93□□□□□ -0.82
SCAF4-206ENST00000485790 PRR20CP86479 221 aa9.93□□□□□ -0.82
SCAF4-206ENST00000485790 PRR20DP86480 221 aa9.93□□□□□ -0.82
SCAF4-206ENST00000485790 PRR20BP86481 221 aa9.93□□□□□ -0.82
SCAF4-206ENST00000485790 PRR20AP86496 221 aa9.93□□□□□ -0.82
SCAF4-206ENST00000485790 TMEM128Q5BJH2 165 aa9.93□□□□□ -0.82
SCAF4-206ENST00000485790 GGNBP1Q5YKI7 109 aa9.93□□□□□ -0.82
SCAF4-206ENST00000485790 OR8I2Q8N0Y5 310 aa9.93□□□□□ -0.82
SCAF4-206ENST00000485790 CIB3Q96Q77 187 aaPredicted RBP9.93□□□□□ -0.82
SCAF4-206ENST00000485790 NDUFAF3Q9BU61 184 aa9.93□□□□□ -0.82
SCAF4-206ENST00000485790 PRR13Q9NZ81 148 aa9.93□□□□□ -0.82
SCAF4-206ENST00000485790 PAIP2BQ9ULR5 123 aaKnown RBP9.93□□□□□ -0.82
SCAF4-206ENST00000485790 HLA-DRB4X5D2U9 266 aa9.93□□□□□ -0.82
SCAF4-206ENST00000485790 PSMB3P49720 205 aa9.92□□□□□ -0.82
SCAF4-206ENST00000485790 ZNF90Q03938 601 aa9.92□□□□□ -0.82
SCAF4-206ENST00000485790 C12orf74Q32Q52 190 aa9.92□□□□□ -0.82
SCAF4-206ENST00000485790 FOXI2Q6ZQN5 318 aa9.92□□□□□ -0.82
SCAF4-206ENST00000485790 TMED4Q7Z7H5 227 aa9.92□□□□□ -0.82
SCAF4-206ENST00000485790 MCFD2Q8NI22 146 aa9.92□□□□□ -0.82
SCAF4-206ENST00000485790 CLUHP3Q96NS8 147 aa9.92□□□□□ -0.82
SCAF4-206ENST00000485790 NEU1Q99519 415 aa9.92□□□□□ -0.82
SCAF4-206ENST00000485790 TEX48A0A1B0GUV7 120 aa9.91□□□□□ -0.82
SCAF4-206ENST00000485790 ISLRO14498 428 aa9.91□□□□□ -0.82
SCAF4-206ENST00000485790 IGKV3-20P01619 116 aa9.91□□□□□ -0.82
SCAF4-206ENST00000485790 SLC25A6P12236 298 aa9.91□□□□□ -0.82
SCAF4-206ENST00000485790 MEOX2P50222 304 aa9.91□□□□□ -0.82
SCAF4-206ENST00000485790 EMP1P54849 157 aa9.91□□□□□ -0.82
SCAF4-206ENST00000485790 LYZP61626 148 aa9.91□□□□□ -0.82
SCAF4-206ENST00000485790 SUPT4H1P63272 117 aaKnown RBP9.91□□□□□ -0.82
SCAF4-206ENST00000485790 PYDC2Q56P42 97 aa9.91□□□□□ -0.82
SCAF4-206ENST00000485790 LINC00336Q6ZUF6 198 aa9.91□□□□□ -0.82
SCAF4-206ENST00000485790 TOMM5Q8N4H5 51 aa9.91□□□□□ -0.82
SCAF4-206ENST00000485790 OR4B1Q8NGF8 309 aa9.91□□□□□ -0.82
SCAF4-206ENST00000485790 TRGV9Q99603 122 aa9.91□□□□□ -0.82
SCAF4-206ENST00000485790 SOSTQ9BQB4 213 aa9.91□□□□□ -0.82
SCAF4-206ENST00000485790 SLC25A21Q9BQT8 299 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms