RNA–Protein interactions for RNA: ENST00000485450.5

USP4-211, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 3,541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-211ENST00000485450 SERPINE2P07093 398 aa6.22□□□□□ -1.41
USP4-211ENST00000485450 IGKV1-13P0DP09 117 aa6.22□□□□□ -1.41
USP4-211ENST00000485450 TNXAQ16473 311 aa6.22□□□□□ -1.41
USP4-211ENST00000485450 DAZAP1Q96EP5 407 aaKnown RBP6.22□□□□□ -1.41
USP4-211ENST00000485450 CACNG5Q9UF02 275 aa6.22□□□□□ -1.41
USP4-211ENST00000485450 CSMD1Q96PZ7 3565 aa6.22□□□□□ -1.41
USP4-211ENST00000485450 A0A087X0K7 114 aa6.22□□□□□ -1.41
USP4-211ENST00000485450 C9JCJ5 164 aa6.22□□□□□ -1.41
USP4-211ENST00000485450 M0R2Z0 102 aa6.22□□□□□ -1.41
USP4-211ENST00000485450 ANGPTL7O43827 346 aa6.22□□□□□ -1.41
USP4-211ENST00000485450 AMY1AP04745 511 aa6.22□□□□□ -1.41
USP4-211ENST00000485450 SPANXN5Q5MJ07 72 aa6.22□□□□□ -1.41
USP4-211ENST00000485450 Q6ZR03 302 aa6.22□□□□□ -1.41
USP4-211ENST00000485450 TMEM70Q9BUB7 260 aa6.22□□□□□ -1.41
USP4-211ENST00000485450 TMEM147Q9BVK8 224 aa6.22□□□□□ -1.41
USP4-211ENST00000485450 CCL28Q9NRJ3 127 aa6.22□□□□□ -1.41
USP4-211ENST00000485450 PIGLQ9Y2B2 252 aa6.22□□□□□ -1.41
USP4-211ENST00000485450 CSDC2Q9Y534 153 aaKnown RBP6.22□□□□□ -1.41
USP4-211ENST00000485450 RER1O15258 196 aa6.21□□□□□ -1.41
USP4-211ENST00000485450 PDCD6O75340 191 aa6.21□□□□□ -1.41
USP4-211ENST00000485450 PSG2P11465 335 aa6.21□□□□□ -1.41
USP4-211ENST00000485450 PRTN3P24158 256 aa6.21□□□□□ -1.41
USP4-211ENST00000485450 GPR183P32249 361 aa6.21□□□□□ -1.41
USP4-211ENST00000485450 GPM6AP51674 278 aa6.21□□□□□ -1.41
USP4-211ENST00000485450 LOXL1Q08397 574 aaPredicted RBP6.21□□□□□ -1.41
USP4-211ENST00000485450 PLCXD3Q63HM9 321 aa6.21□□□□□ -1.41
USP4-211ENST00000485450 ACP7Q6ZNF0 438 aa6.21□□□□□ -1.41
USP4-211ENST00000485450 ZDHHC23Q8IYP9 409 aa6.21□□□□□ -1.41
USP4-211ENST00000485450 MBNL3Q9NUK0 354 aaKnown RBP6.21□□□□□ -1.41
USP4-211ENST00000485450 ZNF816-ZNF321PA0A0X1KG74 233 aa6.21□□□□□ -1.42
USP4-211ENST00000485450 CD300LBA8K4G0 201 aa6.21□□□□□ -1.42
USP4-211ENST00000485450 SPRY1O43609 319 aaPredicted RBP6.21□□□□□ -1.42
USP4-211ENST00000485450 HSBP1O75506 76 aa6.21□□□□□ -1.42
USP4-211ENST00000485450 KLF5Q13887 457 aaPredicted RBP6.21□□□□□ -1.42
USP4-211ENST00000485450 IZUMO4Q1ZYL8 232 aa6.21□□□□□ -1.42
USP4-211ENST00000485450 PIGYQ3MUY2 71 aa6.21□□□□□ -1.42
USP4-211ENST00000485450 TEX36Q5VZQ5 186 aa6.21□□□□□ -1.42
USP4-211ENST00000485450 CARD17Q5XLA6 110 aa6.21□□□□□ -1.42
USP4-211ENST00000485450 MTURNQ8N3F0 131 aa6.21□□□□□ -1.42
USP4-211ENST00000485450 STPG3Q8N7X2 389 aa6.21□□□□□ -1.42
USP4-211ENST00000485450 OR2K2Q8NGT1 345 aa6.21□□□□□ -1.42
USP4-211ENST00000485450 KLF14Q8TD94 323 aaPredicted RBP6.21□□□□□ -1.42
USP4-211ENST00000485450 MED12Q93074 2177 aa6.21□□□□□ -1.42
USP4-211ENST00000485450 AP1S3Q96PC3 154 aa6.21□□□□□ -1.42
USP4-211ENST00000485450 NPCDR1Q9BY65 106 aa6.21□□□□□ -1.42
USP4-211ENST00000485450 SCO2A0A1W2PP80 73 aa6.21□□□□□ -1.42
USP4-211ENST00000485450 IGHV3-9P01782 118 aa6.21□□□□□ -1.42
USP4-211ENST00000485450 IGHG4P01861 327 aa6.21□□□□□ -1.42
USP4-211ENST00000485450 APCSP02743 223 aa6.21□□□□□ -1.42
USP4-211ENST00000485450 MALLQ13021 153 aa6.21□□□□□ -1.42
USP4-211ENST00000485450 SPATA46Q5T0L3 261 aa6.21□□□□□ -1.42
USP4-211ENST00000485450 OSR2Q8N2R0 312 aa6.21□□□□□ -1.42
USP4-211ENST00000485450 ZDHHC16Q969W1 377 aa6.21□□□□□ -1.42
USP4-211ENST00000485450 SRSF8Q9BRL6 282 aaKnown RBP6.21□□□□□ -1.42
USP4-211ENST00000485450 IGHV4-39P01824 125 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 MT-ATP8P03928 68 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 EFNA4P52798 201 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 C8orf86Q6ZUL3 223 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 C11orf53Q8IXP5 236 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 C10orf105Q8TEF2 133 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 FGF23Q9GZV9 251 aaPredicted RBP6.2□□□□□ -1.42
USP4-211ENST00000485450 MS4A6AQ9H2W1 248 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 ARL2-SNX15V9GYD0 113 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 IGKV1-27A0A075B6S5 117 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 A0A096LPE4 126 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 A0A1W2PPZ6 126 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 hDV102S1A0JD36 115 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 FAM90A26D6RGX4 464 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 M0R1B8 84 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 FSHBP01225 129 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 IGKV1-39P01597 117 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 IGKV1D-39P04432 117 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 COL8A1P27658 744 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 VWC2Q2TAL6 325 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 FAM120AOSQ5T036 256 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 OR1L1Q8NH94 360 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 C1QTNF4Q9BXJ3 329 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 MS4A5Q9H3V2 200 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 HSPB8Q9UJY1 196 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 C17orf100A8MU93 164 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 TGFAP01135 160 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 ARL3P36405 182 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 MPV17P39210 176 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 FAM90A1Q86YD7 464 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 OR10AG1Q8NH19 301 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 SPTSSAQ969W0 71 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 PMCHL2Q9BQD1 86 aa6.2□□□□□ -1.42
USP4-211ENST00000485450 TPRP12270 2363 aaKnown RBP6.19□□□□□ -1.42
USP4-211ENST00000485450 TRGV10A0A0A0MS01 117 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 PMS2P5A8MQ11 134 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 IGKV1-5P01602 117 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 DEFA4P12838 97 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 DIAPH2-AS1Q14236 149 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 PDCD1Q15116 288 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 TMEM97Q5BJF2 176 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 OR52E5Q8NH55 327 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 VSTM2AQ8TAG5 236 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 C11orf52Q96A22 123 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 TNFRSF19Q9NS68 423 aa6.19□□□□□ -1.42
USP4-211ENST00000485450 IGKV1-12A0A0C4DH73 117 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms