RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 NBEAL2Q6ZNJ1 2754 aa13.29□□□□□ -0.28
SREBF1-213ENST00000485080 IGHV3-49A0A0A0MS15 119 aa13.29□□□□□ -0.28
SREBF1-213ENST00000485080 TRAV2A0A0B4J234 112 aa13.29□□□□□ -0.28
SREBF1-213ENST00000485080 OR4C46A6NHA9 309 aa13.29□□□□□ -0.28
SREBF1-213ENST00000485080 DEDDO75618 318 aa13.29□□□□□ -0.28
SREBF1-213ENST00000485080 IL4P05112 153 aa13.29□□□□□ -0.28
SREBF1-213ENST00000485080 HNRNPCP07910 306 aaKnown RBP eCLIP13.29□□□□□ -0.28
SREBF1-213ENST00000485080 METTL15P1P0C7V9 234 aa13.29□□□□□ -0.28
SREBF1-213ENST00000485080 PVALBP20472 110 aaPredicted RBP13.29□□□□□ -0.28
SREBF1-213ENST00000485080 CYCSP99999 105 aaKnown RBP13.29□□□□□ -0.28
SREBF1-213ENST00000485080 ZNF90Q03938 601 aa13.29□□□□□ -0.28
SREBF1-213ENST00000485080 USF2Q15853 346 aaPredicted RBP13.29□□□□□ -0.28
SREBF1-213ENST00000485080 OR8G2PQ6IF36 304 aa13.29□□□□□ -0.28
SREBF1-213ENST00000485080 LINC00322Q6ZN03 302 aaPredicted RBP13.29□□□□□ -0.28
SREBF1-213ENST00000485080 LILRB2Q8N423 598 aa13.29□□□□□ -0.28
SREBF1-213ENST00000485080 OR10P1Q8NGE3 313 aa13.29□□□□□ -0.28
SREBF1-213ENST00000485080 NARS2Q96I59 477 aaKnown RBP13.29□□□□□ -0.28
SREBF1-213ENST00000485080 SELENOKQ9Y6D0 94 aa13.29□□□□□ -0.28
SREBF1-213ENST00000485080 OR11H12B2RN74 326 aa13.28□□□□□ -0.28
SREBF1-213ENST00000485080 L7N2F9 121 aa13.28□□□□□ -0.28
SREBF1-213ENST00000485080 NUP62P37198 522 aaPredicted RBP13.28□□□□□ -0.28
SREBF1-213ENST00000485080 VAMP2P63027 116 aa13.28□□□□□ -0.28
SREBF1-213ENST00000485080 RAB32Q13637 225 aa13.28□□□□□ -0.28
SREBF1-213ENST00000485080 TCF24Q7RTU0 167 aa13.28□□□□□ -0.28
SREBF1-213ENST00000485080 RNF125Q96EQ8 232 aa13.28□□□□□ -0.28
SREBF1-213ENST00000485080 LSM5Q9Y4Y9 91 aaKnown RBP13.28□□□□□ -0.28
SREBF1-213ENST00000485080 IGHV3OR16-13A0A075B7E8 117 aa13.27□□□□□ -0.29
SREBF1-213ENST00000485080 IGHV3-74A0A0B4J1X5 117 aa13.27□□□□□ -0.29
SREBF1-213ENST00000485080 GOSR2O14653 212 aa13.27□□□□□ -0.29
SREBF1-213ENST00000485080 DFFBO76075 338 aa13.27□□□□□ -0.29
SREBF1-213ENST00000485080 CMC4P56277 68 aaPredicted RBP13.27□□□□□ -0.29
SREBF1-213ENST00000485080 GRAMD2BQ96HH9 432 aa13.27□□□□□ -0.29
SREBF1-213ENST00000485080 TUBA4BQ9H853 241 aa13.27□□□□□ -0.29
SREBF1-213ENST00000485080 NPVFQ9HCQ7 196 aa13.27□□□□□ -0.29
SREBF1-213ENST00000485080 LYRM2Q9NU23 88 aaPredicted RBP13.27□□□□□ -0.29
SREBF1-213ENST00000485080 PFDN2Q9UHV9 154 aa13.27□□□□□ -0.29
SREBF1-213ENST00000485080 RABAC1Q9UI14 185 aa13.27□□□□□ -0.29
SREBF1-213ENST00000485080 TENM3Q9P273 2699 aa13.27□□□□□ -0.29
SREBF1-213ENST00000485080 BUB3O43684 328 aa13.26□□□□□ -0.29
SREBF1-213ENST00000485080 CCNKO75909 580 aa13.26□□□□□ -0.29
SREBF1-213ENST00000485080 P2RY1P47900 373 aa13.26□□□□□ -0.29
SREBF1-213ENST00000485080 EIF2B2P49770 351 aaKnown RBP13.26□□□□□ -0.29
SREBF1-213ENST00000485080 PAFAH1B2P68402 229 aa13.26□□□□□ -0.29
SREBF1-213ENST00000485080 AKR1C1Q04828 323 aa13.26□□□□□ -0.29
SREBF1-213ENST00000485080 ARL16Q0P5N6 197 aa13.26□□□□□ -0.29
SREBF1-213ENST00000485080 C16orf54Q6UWD8 224 aa13.26□□□□□ -0.29
SREBF1-213ENST00000485080 SBSPONQ8IVN8 264 aa13.26□□□□□ -0.29
SREBF1-213ENST00000485080 SLC45A2Q9UMX9 530 aa13.26□□□□□ -0.29
SREBF1-213ENST00000485080 SSNA1O43805 119 aa13.25□□□□□ -0.29
SREBF1-213ENST00000485080 SIX6O95475 246 aa13.25□□□□□ -0.29
SREBF1-213ENST00000485080 H2BFSP57053 126 aa13.25□□□□□ -0.29
SREBF1-213ENST00000485080 S100A10P60903 97 aa13.25□□□□□ -0.29
SREBF1-213ENST00000485080 SELENOTP62341 195 aa13.25□□□□□ -0.29
SREBF1-213ENST00000485080 DEFB125Q8N687 156 aa13.25□□□□□ -0.29
SREBF1-213ENST00000485080 GLMPQ8WWB7 406 aa13.25□□□□□ -0.29
SREBF1-213ENST00000485080 MGAT4CQ9UBM8 478 aa13.25□□□□□ -0.29
SREBF1-213ENST00000485080 IGHV3-66A0A0C4DH42 116 aa13.24□□□□□ -0.29
SREBF1-213ENST00000485080 HELTA6NFD8 242 aa13.24□□□□□ -0.29
SREBF1-213ENST00000485080 CAV2P51636 162 aa13.24□□□□□ -0.29
SREBF1-213ENST00000485080 AP2S1P53680 142 aaPredicted RBP13.24□□□□□ -0.29
SREBF1-213ENST00000485080 ODF3L2Q3SX64 289 aa13.24□□□□□ -0.29
SREBF1-213ENST00000485080 C1orf194Q5T5A4 169 aa13.24□□□□□ -0.29
SREBF1-213ENST00000485080 TM2D3Q9BRN9 247 aa13.24□□□□□ -0.29
SREBF1-213ENST00000485080 MS4A6AQ9H2W1 248 aa13.24□□□□□ -0.29
SREBF1-213ENST00000485080 RLN2P04090 185 aa13.23□□□□□ -0.29
SREBF1-213ENST00000485080 SULT1A1P50225 295 aa13.23□□□□□ -0.29
SREBF1-213ENST00000485080 BCAP31P51572 246 aa13.23□□□□□ -0.29
SREBF1-213ENST00000485080 PLP1P60201 277 aa13.23□□□□□ -0.29
SREBF1-213ENST00000485080 TEPPQ6URK8 271 aa13.23□□□□□ -0.29
SREBF1-213ENST00000485080 TMEM252Q8N6L7 170 aa13.23□□□□□ -0.29
SREBF1-213ENST00000485080 BPIFCQ8NFQ6 507 aa13.23□□□□□ -0.29
SREBF1-213ENST00000485080 ASCL2Q99929 193 aa13.23□□□□□ -0.29
SREBF1-213ENST00000485080 WFDC10AQ9H1F0 79 aa13.23□□□□□ -0.29
SREBF1-213ENST00000485080 SRD5A3Q9H8P0 318 aa13.23□□□□□ -0.29
SREBF1-213ENST00000485080 ALG5Q9Y673 324 aa13.23□□□□□ -0.29
SREBF1-213ENST00000485080 DNAH7Q8WXX0 4024 aa13.23□□□□□ -0.29
SREBF1-213ENST00000485080 SMCO3A2RU48 225 aa13.22□□□□□ -0.29
SREBF1-213ENST00000485080 RBMY1BA6NDE4 496 aaKnown RBP13.22□□□□□ -0.29
SREBF1-213ENST00000485080 RBMY1EA6NEQ0 496 aaKnown RBP13.22□□□□□ -0.29
SREBF1-213ENST00000485080 FAM24AA6NFZ4 105 aa13.22□□□□□ -0.29
SREBF1-213ENST00000485080 E5RGE8 158 aa13.22□□□□□ -0.29
SREBF1-213ENST00000485080 RBMY1DP0C7P1 496 aaKnown RBP13.22□□□□□ -0.29
SREBF1-213ENST00000485080 S100A11P31949 105 aa13.22□□□□□ -0.29
SREBF1-213ENST00000485080 LYZP61626 148 aa13.22□□□□□ -0.29
SREBF1-213ENST00000485080 RRAS2P62070 204 aaPredicted RBP13.22□□□□□ -0.29
SREBF1-213ENST00000485080 SLC38A11Q08AI6 406 aa13.22□□□□□ -0.29
SREBF1-213ENST00000485080 OR2F1Q13607 317 aa13.22□□□□□ -0.29
SREBF1-213ENST00000485080 HAGHQ16775 308 aa13.22□□□□□ -0.29
SREBF1-213ENST00000485080 VWC2Q2TAL6 325 aa13.22□□□□□ -0.29
SREBF1-213ENST00000485080 TMEM182Q6ZP80 229 aaPredicted RBP13.22□□□□□ -0.29
SREBF1-213ENST00000485080 CYP2G1PQ6ZSU1 146 aa13.22□□□□□ -0.29
SREBF1-213ENST00000485080 STPG3Q8N7X2 389 aa13.22□□□□□ -0.29
SREBF1-213ENST00000485080 PBDC1Q9BVG4 233 aa13.22□□□□□ -0.29
SREBF1-213ENST00000485080 SEPSECSQ9HD40 501 aaKnown RBP13.22□□□□□ -0.29
SREBF1-213ENST00000485080 K7EQG2 157 aa13.21□□□□□ -0.29
SREBF1-213ENST00000485080 CST7O76096 145 aa13.21□□□□□ -0.29
SREBF1-213ENST00000485080 S100A7P31151 101 aa13.21□□□□□ -0.29
SREBF1-213ENST00000485080 RGS21Q2M5E4 152 aa13.21□□□□□ -0.29
SREBF1-213ENST00000485080 STX12Q86Y82 276 aa13.21□□□□□ -0.29
SREBF1-213ENST00000485080 DCANP1Q8TF63 244 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms