RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 CCL1P22362 96 aa12.55□□□□□ -0.4
RXRA-203ENST00000484822 FXYD7P58549 80 aa12.55□□□□□ -0.4
RXRA-203ENST00000484822 WNK2Q9Y3S1 2297 aa12.55□□□□□ -0.4
RXRA-203ENST00000484822 C9JQL5 133 aa12.55□□□□□ -0.4
RXRA-203ENST00000484822 TRGV3P03979 118 aa12.55□□□□□ -0.4
RXRA-203ENST00000484822 SRSF1Q07955 248 aaKnown RBP eCLIP12.55□□□□□ -0.4
RXRA-203ENST00000484822 H3BRM9 83 aa12.55□□□□□ -0.4
RXRA-203ENST00000484822 MCRIP2Q9BUT9 160 aaKnown RBP12.55□□□□□ -0.4
RXRA-203ENST00000484822 HEATR1Q9H583 2144 aaKnown RBP12.55□□□□□ -0.4
RXRA-203ENST00000484822 IGKV1-12A0A0C4DH73 117 aa12.55□□□□□ -0.4
RXRA-203ENST00000484822 IGKV1D-12P01611 117 aa12.55□□□□□ -0.4
RXRA-203ENST00000484822 IGKV1D-33P01593 117 aa12.54□□□□□ -0.4
RXRA-203ENST00000484822 IGKV1-33P01594 117 aa12.54□□□□□ -0.4
RXRA-203ENST00000484822 CELA3BP08861 270 aa12.54□□□□□ -0.4
RXRA-203ENST00000484822 ESDP10768 282 aa12.54□□□□□ -0.4
RXRA-203ENST00000484822 RNASE4P34096 147 aaKnown RBP12.54□□□□□ -0.4
RXRA-203ENST00000484822 CD69Q07108 199 aa12.54□□□□□ -0.4
RXRA-203ENST00000484822 GGTLC1Q9BX51 225 aa12.54□□□□□ -0.4
RXRA-203ENST00000484822 TP53BP1Q12888 1972 aaPredicted RBP12.54□□□□□ -0.4
RXRA-203ENST00000484822 A0A0G2JMM0 328 aa12.54□□□□□ -0.4
RXRA-203ENST00000484822 A0A1W2PPB8 328 aa12.54□□□□□ -0.4
RXRA-203ENST00000484822 KIR3DP1A8MWS1 328 aa12.54□□□□□ -0.4
RXRA-203ENST00000484822 AGMATQ9BSE5 352 aa12.54□□□□□ -0.4
RXRA-203ENST00000484822 CHTOPQ9Y3Y2 248 aaKnown RBP12.54□□□□□ -0.4
RXRA-203ENST00000484822 CNTFRP26992 372 aa12.54□□□□□ -0.4
RXRA-203ENST00000484822 SNHG12Q9BXW3 62 aa12.54□□□□□ -0.4
RXRA-203ENST00000484822 WDR81Q562E7 1941 aa12.54□□□□□ -0.4
RXRA-203ENST00000484822 TRAV8-1A0A0A6YYK1 113 aa12.54□□□□□ -0.4
RXRA-203ENST00000484822 A0A0U1RRA0 63 aa12.54□□□□□ -0.4
RXRA-203ENST00000484822 NCR2O95944 276 aa12.54□□□□□ -0.4
RXRA-203ENST00000484822 ATP5L2Q7Z4Y8 100 aa12.54□□□□□ -0.4
RXRA-203ENST00000484822 RTN4RL2Q86UN3 420 aa12.54□□□□□ -0.4
RXRA-203ENST00000484822 TCRBV4S1A1TA0A5B7 111 aa12.53□□□□□ -0.4
RXRA-203ENST00000484822 CCL3L1P16619 93 aa12.53□□□□□ -0.4
RXRA-203ENST00000484822 PRB3Q04118 309 aaPredicted RBP12.53□□□□□ -0.4
RXRA-203ENST00000484822 ZNF497Q6ZNH5 498 aa12.53□□□□□ -0.4
RXRA-203ENST00000484822 PPBPP02775 128 aa12.53□□□□□ -0.4
RXRA-203ENST00000484822 SEPSECSQ9HD40 501 aaKnown RBP12.53□□□□□ -0.4
RXRA-203ENST00000484822 DPM3Q9P2X0 92 aa12.53□□□□□ -0.4
RXRA-203ENST00000484822 THADAQ6YHU6 1953 aa12.53□□□□□ -0.4
RXRA-203ENST00000484822 IGHV3-64A0A075B6Q5 118 aa12.53□□□□□ -0.4
RXRA-203ENST00000484822 TM4SF5O14894 197 aa12.53□□□□□ -0.4
RXRA-203ENST00000484822 NOTCH3Q9UM47 2321 aa12.53□□□□□ -0.4
RXRA-203ENST00000484822 SRSF6Q13247 344 aaKnown RBP12.52□□□□□ -0.4
RXRA-203ENST00000484822 PGPEP1Q9NXJ5 209 aa12.52□□□□□ -0.4
RXRA-203ENST00000484822 MORN2Q502X0 79 aa12.52□□□□□ -0.41
RXRA-203ENST00000484822 OCIAD2Q56VL3 154 aa12.52□□□□□ -0.41
RXRA-203ENST00000484822 CLEC19AQ6UXS0 136 aa12.52□□□□□ -0.41
RXRA-203ENST00000484822 DUTP33316 252 aaKnown RBP12.52□□□□□ -0.41
RXRA-203ENST00000484822 KIR3DS1Q14943 382 aa12.52□□□□□ -0.41
RXRA-203ENST00000484822 TMEM101Q96IK0 257 aa12.52□□□□□ -0.41
RXRA-203ENST00000484822 POLR3KQ9Y2Y1 108 aaPredicted RBP12.52□□□□□ -0.41
RXRA-203ENST00000484822 A0A1B0GUS0 222 aa12.52□□□□□ -0.41
RXRA-203ENST00000484822 TMEM155Q4W5P6 130 aa12.52□□□□□ -0.41
RXRA-203ENST00000484822 GLMPQ8WWB7 406 aa12.52□□□□□ -0.41
RXRA-203ENST00000484822 RNF125Q96EQ8 232 aa12.52□□□□□ -0.41
RXRA-203ENST00000484822 ASCL2Q99929 193 aa12.52□□□□□ -0.41
RXRA-203ENST00000484822 YPEL1O60688 119 aa12.51□□□□□ -0.41
RXRA-203ENST00000484822 ZNF138P52744 262 aa12.51□□□□□ -0.41
RXRA-203ENST00000484822 YPEL2Q96QA6 119 aa12.51□□□□□ -0.41
RXRA-203ENST00000484822 SLC25A2Q9BXI2 301 aa12.51□□□□□ -0.41
RXRA-203ENST00000484822 D6R8Y8 96 aa12.51□□□□□ -0.41
RXRA-203ENST00000484822 IFI27P40305 119 aaPredicted RBP12.51□□□□□ -0.41
RXRA-203ENST00000484822 C20orf204Q6ZNR8 217 aa12.51□□□□□ -0.41
RXRA-203ENST00000484822 C5orf24Q7Z6I8 188 aa12.51□□□□□ -0.41
RXRA-203ENST00000484822 COX11Q9Y6N1 276 aa12.51□□□□□ -0.41
RXRA-203ENST00000484822 NMSQ5H8A3 153 aa12.51□□□□□ -0.41
RXRA-203ENST00000484822 RNF182Q8N6D2 247 aa12.51□□□□□ -0.41
RXRA-203ENST00000484822 OR10W1Q8NGF6 305 aa12.51□□□□□ -0.41
RXRA-203ENST00000484822 ERG28Q9UKR5 140 aa12.51□□□□□ -0.41
RXRA-203ENST00000484822 NPIPB5A8MRT5 1133 aa12.51□□□□□ -0.41
RXRA-203ENST00000484822 NPSP0C0P6 89 aa12.51□□□□□ -0.41
RXRA-203ENST00000484822 PLNP26678 52 aa12.51□□□□□ -0.41
RXRA-203ENST00000484822 FAM90A2PQ658T7 463 aa12.5□□□□□ -0.41
RXRA-203ENST00000484822 C1orf122Q6ZSJ8 110 aa12.5□□□□□ -0.41
RXRA-203ENST00000484822 SYS1-DBNDD2H3BUS1 97 aa12.5□□□□□ -0.41
RXRA-203ENST00000484822 IGHV2-70P01814 119 aa12.5□□□□□ -0.41
RXRA-203ENST00000484822 MST1LQ2TV78 715 aa12.5□□□□□ -0.41
RXRA-203ENST00000484822 ARTNQ5T4W7 220 aa12.5□□□□□ -0.41
RXRA-203ENST00000484822 ARPC1AQ92747 370 aa12.5□□□□□ -0.41
RXRA-203ENST00000484822 PRCDQ00LT1 54 aa12.5□□□□□ -0.41
RXRA-203ENST00000484822 RNF144BQ7Z419 303 aa12.5□□□□□ -0.41
RXRA-203ENST00000484822 C7orf69Q9H7B7 122 aa12.5□□□□□ -0.41
RXRA-203ENST00000484822 MSRB2Q9Y3D2 182 aa12.5□□□□□ -0.41
RXRA-203ENST00000484822 FAM27E3Q08E93 113 aa12.5□□□□□ -0.41
RXRA-203ENST00000484822 ORMDL2Q53FV1 153 aa12.5□□□□□ -0.41
RXRA-203ENST00000484822 LHX2P50458 406 aa12.49□□□□□ -0.41
RXRA-203ENST00000484822 PLAURQ03405 335 aa12.49□□□□□ -0.41
RXRA-203ENST00000484822 SLC25A15Q9Y619 301 aa12.49□□□□□ -0.41
RXRA-203ENST00000484822 IGHV2OR16-5A0A0B4J2B6 119 aa12.49□□□□□ -0.41
RXRA-203ENST00000484822 IQCF6A8MYZ5 107 aa12.49□□□□□ -0.41
RXRA-203ENST00000484822 IGKV1-5P01602 117 aa12.49□□□□□ -0.41
RXRA-203ENST00000484822 SLC25A48Q6ZT89 311 aaKnown RBP12.49□□□□□ -0.41
RXRA-203ENST00000484822 PPP1R27Q86WC6 154 aa12.49□□□□□ -0.41
RXRA-203ENST00000484822 NUP35Q8NFH5 326 aa12.49□□□□□ -0.41
RXRA-203ENST00000484822 LINC00312Q9Y6C7 94 aa12.49□□□□□ -0.41
RXRA-203ENST00000484822 CD7P09564 240 aa12.48□□□□□ -0.41
RXRA-203ENST00000484822 CDKN1AP38936 164 aa12.48□□□□□ -0.41
RXRA-203ENST00000484822 MRPL52Q86TS9 123 aaKnown RBP12.48□□□□□ -0.41
RXRA-203ENST00000484822 PEMTQ9UBM1 199 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms