RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 CRPP02741 224 aa1.48□□□□□ -2.17
SMC4-215ENST00000484799 UBBP0CG47 229 aa1.48□□□□□ -2.17
SMC4-215ENST00000484799 CRYGAP11844 174 aa1.48□□□□□ -2.17
SMC4-215ENST00000484799 SERPINB1P30740 379 aa1.48□□□□□ -2.17
SMC4-215ENST00000484799 C22orf39Q6P5X5 142 aa1.48□□□□□ -2.17
SMC4-215ENST00000484799 Q6ZRN7 208 aaPredicted RBP1.48□□□□□ -2.17
SMC4-215ENST00000484799 STX19Q8N4C7 294 aa1.48□□□□□ -2.17
SMC4-215ENST00000484799 TEX37Q96LM6 180 aa1.48□□□□□ -2.17
SMC4-215ENST00000484799 LYSMD1Q96S90 227 aa1.48□□□□□ -2.17
SMC4-215ENST00000484799 LINC00467Q9BRT7 94 aa1.48□□□□□ -2.17
SMC4-215ENST00000484799 HS3ST2Q9Y278 367 aa1.48□□□□□ -2.17
SMC4-215ENST00000484799 UFC1Q9Y3C8 167 aa1.48□□□□□ -2.17
SMC4-215ENST00000484799 COL5A3P25940 1745 aaPredicted RBP1.48□□□□□ -2.17
SMC4-215ENST00000484799 FCGBPQ9Y6R7 5405 aaPredicted RBP1.47□□□□□ -2.17
SMC4-215ENST00000484799 RIIAD1A6NNX1 92 aa1.47□□□□□ -2.17
SMC4-215ENST00000484799 PIAS1O75925 651 aa1.47□□□□□ -2.17
SMC4-215ENST00000484799 FABP1P07148 127 aa1.47□□□□□ -2.17
SMC4-215ENST00000484799 ZNF705BP0CI00 300 aaPredicted RBP1.47□□□□□ -2.17
SMC4-215ENST00000484799 IDO1P14902 403 aa1.47□□□□□ -2.17
SMC4-215ENST00000484799 FKBP2P26885 142 aaKnown RBP1.47□□□□□ -2.17
SMC4-215ENST00000484799 RNASE4P34096 147 aaKnown RBP1.47□□□□□ -2.17
SMC4-215ENST00000484799 CRYBA4P53673 196 aa1.47□□□□□ -2.17
SMC4-215ENST00000484799 UBE2BP63146 152 aa1.47□□□□□ -2.17
SMC4-215ENST00000484799 MYL5Q02045 173 aa1.47□□□□□ -2.17
SMC4-215ENST00000484799 ZNF846Q147U1 533 aa1.47□□□□□ -2.17
SMC4-215ENST00000484799 FP248Q71RG6 208 aaPredicted RBP1.47□□□□□ -2.17
SMC4-215ENST00000484799 SMIM20Q8N5G0 67 aa1.47□□□□□ -2.17
SMC4-215ENST00000484799 NUP35Q8NFH5 326 aa1.47□□□□□ -2.17
SMC4-215ENST00000484799 TEX47Q8TBZ9 253 aa1.47□□□□□ -2.17
SMC4-215ENST00000484799 AQP3Q92482 292 aa1.47□□□□□ -2.17
SMC4-215ENST00000484799 SLC50A1Q9BRV3 221 aa1.47□□□□□ -2.17
SMC4-215ENST00000484799 OR2J1Q9GZK6 312 aa1.47□□□□□ -2.17
SMC4-215ENST00000484799 PCBD2Q9H0N5 130 aa1.47□□□□□ -2.17
SMC4-215ENST00000484799 MED29Q9NX70 200 aa1.47□□□□□ -2.17
SMC4-215ENST00000484799 OR5AC2Q9NZP5 309 aa1.47□□□□□ -2.17
SMC4-215ENST00000484799 OBSL1O75147 1896 aa1.47□□□□□ -2.17
SMC4-215ENST00000484799 MYH7BA7E2Y1 1941 aa1.46□□□□□ -2.18
SMC4-215ENST00000484799 DENND4CQ5VZ89 1909 aa1.46□□□□□ -2.18
SMC4-215ENST00000484799 NCAPD3P42695 1498 aa1.46□□□□□ -2.18
SMC4-215ENST00000484799 IGKV1D-42A0A075B6H8 117 aa1.46□□□□□ -2.18
SMC4-215ENST00000484799 A0A1B0GV72 72 aa1.46□□□□□ -2.18
SMC4-215ENST00000484799 OR2T1O43869 369 aa1.46□□□□□ -2.18
SMC4-215ENST00000484799 CST8O60676 142 aa1.46□□□□□ -2.18
SMC4-215ENST00000484799 PFDN1O60925 122 aa1.46□□□□□ -2.18
SMC4-215ENST00000484799 IFNA14P01570 189 aa1.46□□□□□ -2.18
SMC4-215ENST00000484799 BRMS1LQ5PSV4 323 aa1.46□□□□□ -2.18
SMC4-215ENST00000484799 NAA38Q9BRA0 125 aaKnown RBP1.46□□□□□ -2.18
SMC4-215ENST00000484799 PRADC1Q9BSG0 188 aa1.46□□□□□ -2.18
SMC4-215ENST00000484799 MED9Q9NWA0 146 aa1.46□□□□□ -2.18
SMC4-215ENST00000484799 SS18L2Q9UHA2 77 aa1.46□□□□□ -2.18
SMC4-215ENST00000484799 LAMTOR3Q9UHA4 124 aa1.46□□□□□ -2.18
SMC4-215ENST00000484799 RIMBP3CA6NJZ7 1639 aa1.46□□□□□ -2.18
SMC4-215ENST00000484799 RIMBP3BA6NNM3 1639 aa1.46□□□□□ -2.18
SMC4-215ENST00000484799 ZCCHC11Q5TAX3 1644 aaKnown RBP1.46□□□□□ -2.18
SMC4-215ENST00000484799 RIMBP3Q9UFD9 1639 aa1.46□□□□□ -2.18
SMC4-215ENST00000484799 MYH2Q9UKX2 1941 aa1.45□□□□□ -2.18
SMC4-215ENST00000484799 TRBV6-5A0A0K0K1A5 114 aa1.45□□□□□ -2.18
SMC4-215ENST00000484799 M0R378 163 aa1.45□□□□□ -2.18
SMC4-215ENST00000484799 PGRMC1O00264 195 aaKnown RBP1.45□□□□□ -2.18
SMC4-215ENST00000484799 MFSD11O43934 449 aa1.45□□□□□ -2.18
SMC4-215ENST00000484799 ASAH2BP0C7U1 165 aa1.45□□□□□ -2.18
SMC4-215ENST00000484799 OGNP20774 298 aaKnown RBP1.45□□□□□ -2.18
SMC4-215ENST00000484799 KRTAP12-1P59990 96 aa1.45□□□□□ -2.18
SMC4-215ENST00000484799 B2MP61769 119 aa1.45□□□□□ -2.18
SMC4-215ENST00000484799 RHOGP84095 191 aa1.45□□□□□ -2.18
SMC4-215ENST00000484799 C12orf29Q8N999 325 aa1.45□□□□□ -2.18
SMC4-215ENST00000484799 SLC30A7Q8NEW0 376 aa1.45□□□□□ -2.18
SMC4-215ENST00000484799 OR10J5Q8NHC4 309 aa1.45□□□□□ -2.18
SMC4-215ENST00000484799 ZNF563Q8TA94 476 aa1.45□□□□□ -2.18
SMC4-215ENST00000484799 STAG3L4Q8TBR4 150 aa1.45□□□□□ -2.18
SMC4-215ENST00000484799 PLEKHB2Q96CS7 222 aa1.45□□□□□ -2.18
SMC4-215ENST00000484799 Q96M85 177 aa1.45□□□□□ -2.18
SMC4-215ENST00000484799 RTL8AQ9BWD3 113 aa1.45□□□□□ -2.18
SMC4-215ENST00000484799 TMEM126AQ9H061 195 aa1.45□□□□□ -2.18
SMC4-215ENST00000484799 CYSTM1Q9H1C7 97 aa1.45□□□□□ -2.18
SMC4-215ENST00000484799 BCL2L10Q9HD36 194 aa1.45□□□□□ -2.18
SMC4-215ENST00000484799 C14orf132Q9NPU4 83 aa1.45□□□□□ -2.18
SMC4-215ENST00000484799 RGS12O14924 1447 aa1.45□□□□□ -2.18
SMC4-215ENST00000484799 SETD5Q9C0A6 1442 aa1.45□□□□□ -2.18
SMC4-215ENST00000484799 CR1P17927 2039 aa1.45□□□□□ -2.18
SMC4-215ENST00000484799 RP1P56715 2156 aa1.45□□□□□ -2.18
SMC4-215ENST00000484799 CAMSAP2Q08AD1 1489 aa1.44□□□□□ -2.18
SMC4-215ENST00000484799 FREM1Q5H8C1 2179 aa1.44□□□□□ -2.18
SMC4-215ENST00000484799 ARHGEF28Q8N1W1 1705 aaKnown RBP1.44□□□□□ -2.18
SMC4-215ENST00000484799 TRAV14DV4A0A0A6YYC5 116 aa1.44□□□□□ -2.18
SMC4-215ENST00000484799 A8MWV9 139 aa1.44□□□□□ -2.18
SMC4-215ENST00000484799 NDUFB3O43676 98 aa1.44□□□□□ -2.18
SMC4-215ENST00000484799 MRPS14O60783 128 aaKnown RBP1.44□□□□□ -2.18
SMC4-215ENST00000484799 UBL3O95164 117 aa1.44□□□□□ -2.18
SMC4-215ENST00000484799 CRHP06850 196 aa1.44□□□□□ -2.18
SMC4-215ENST00000484799 DYNLT1P63172 113 aa1.44□□□□□ -2.18
SMC4-215ENST00000484799 TFAMQ00059 246 aaKnown RBP1.44□□□□□ -2.18
SMC4-215ENST00000484799 ESRGQ1W209 222 aa1.44□□□□□ -2.18
SMC4-215ENST00000484799 SMIM15Q7Z3B0 74 aa1.44□□□□□ -2.18
SMC4-215ENST00000484799 IFT20Q8IY31 132 aa1.44□□□□□ -2.18
SMC4-215ENST00000484799 EXOC3-AS1Q8N2X6 119 aa1.44□□□□□ -2.18
SMC4-215ENST00000484799 ZNF625Q96I27 306 aaPredicted RBP1.44□□□□□ -2.18
SMC4-215ENST00000484799 SMPXQ9UHP9 88 aa1.44□□□□□ -2.18
SMC4-215ENST00000484799 SOX21Q9Y651 276 aaPredicted RBP1.44□□□□□ -2.18
SMC4-215ENST00000484799 FBN3Q75N90 2809 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms