RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 OR51G1Q8NGK1 321 aa20.66■□□□□ 0.9
HLA-C-207ENST00000484378 NRN1Q9NPD7 142 aa20.66■□□□□ 0.9
HLA-C-207ENST00000484378 FAM90A26D6RGX4 464 aa20.65■□□□□ 0.9
HLA-C-207ENST00000484378 BUB3O43684 328 aa20.65■□□□□ 0.9
HLA-C-207ENST00000484378 ATP5IP56385 69 aaPredicted RBP20.65■□□□□ 0.9
HLA-C-207ENST00000484378 RNF125Q96EQ8 232 aa20.65■□□□□ 0.9
HLA-C-207ENST00000484378 SLC35E1Q96K37 410 aa20.65■□□□□ 0.9
HLA-C-207ENST00000484378 RAB40CQ96S21 281 aa20.65■□□□□ 0.9
HLA-C-207ENST00000484378 IGHV4-28A0A0C4DH34 117 aa20.64■□□□□ 0.89
HLA-C-207ENST00000484378 DUXBA0A1W2PPF3 345 aa20.64■□□□□ 0.89
HLA-C-207ENST00000484378 ZFP92A6NM28 416 aa20.64■□□□□ 0.89
HLA-C-207ENST00000484378 VAMP1P23763 118 aa20.64■□□□□ 0.89
HLA-C-207ENST00000484378 TMEM128Q5BJH2 165 aa20.64■□□□□ 0.89
HLA-C-207ENST00000484378 PBDC1Q9BVG4 233 aa20.64■□□□□ 0.89
HLA-C-207ENST00000484378 V9GYH0 126 aa20.64■□□□□ 0.89
HLA-C-207ENST00000484378 CCDC160A6NGH7 325 aa20.63■□□□□ 0.89
HLA-C-207ENST00000484378 MIFP14174 115 aa20.63■□□□□ 0.89
HLA-C-207ENST00000484378 NUP62P37198 522 aaPredicted RBP20.63■□□□□ 0.89
HLA-C-207ENST00000484378 CLEC5AQ9NY25 188 aa20.63■□□□□ 0.89
HLA-C-207ENST00000484378 GPX4P36969 197 aaPredicted RBP20.62■□□□□ 0.89
HLA-C-207ENST00000484378 GAMTQ14353 236 aa20.62■□□□□ 0.89
HLA-C-207ENST00000484378 LGALS9CQ6DKI2 356 aa20.62■□□□□ 0.89
HLA-C-207ENST00000484378 PFDN2Q9UHV9 154 aa20.62■□□□□ 0.89
HLA-C-207ENST00000484378 KMT2AQ03164 3969 aa20.61■□□□□ 0.89
HLA-C-207ENST00000484378 ZNF705EA8MWA4 302 aaPredicted RBP20.61■□□□□ 0.89
HLA-C-207ENST00000484378 IAPPP10997 89 aa20.61■□□□□ 0.89
HLA-C-207ENST00000484378 S100A5P33763 92 aa20.61■□□□□ 0.89
HLA-C-207ENST00000484378 C2CD4CQ8TF44 421 aa20.61■□□□□ 0.89
HLA-C-207ENST00000484378 SEPSECSQ9HD40 501 aaKnown RBP20.61■□□□□ 0.89
HLA-C-207ENST00000484378 PITX3O75364 302 aa20.6■□□□□ 0.89
HLA-C-207ENST00000484378 RBMY1A1P0DJD3 496 aaKnown RBP20.6■□□□□ 0.89
HLA-C-207ENST00000484378 RBMY1CP0DJD4 496 aa20.6■□□□□ 0.89
HLA-C-207ENST00000484378 ZNF90Q03938 601 aa20.6■□□□□ 0.89
HLA-C-207ENST00000484378 RBMY1FQ15415 496 aaKnown RBP20.6■□□□□ 0.89
HLA-C-207ENST00000484378 ZNF79Q15937 498 aa20.6■□□□□ 0.89
HLA-C-207ENST00000484378 OR8G2PQ6IF36 304 aa20.6■□□□□ 0.89
HLA-C-207ENST00000484378 RPP25LQ8N5L8 163 aaKnown RBP20.6■□□□□ 0.89
HLA-C-207ENST00000484378 SLC25A21Q9BQT8 299 aaPredicted RBP20.6■□□□□ 0.89
HLA-C-207ENST00000484378 HRH4Q9H3N8 390 aa20.6■□□□□ 0.89
HLA-C-207ENST00000484378 TBC1D24Q9ULP9 559 aa20.6■□□□□ 0.89
HLA-C-207ENST00000484378 PAIP2BQ9ULR5 123 aaKnown RBP20.6■□□□□ 0.89
HLA-C-207ENST00000484378 FABP1P07148 127 aa20.59■□□□□ 0.89
HLA-C-207ENST00000484378 RAB11AP62491 216 aa20.59■□□□□ 0.89
HLA-C-207ENST00000484378 LRTM2Q8N967 370 aa20.59■□□□□ 0.89
HLA-C-207ENST00000484378 X6R8D5 127 aa20.59■□□□□ 0.89
HLA-C-207ENST00000484378 IGKV1D-37A0A075B6S9 117 aa20.58■□□□□ 0.89
HLA-C-207ENST00000484378 DEDDO75618 318 aa20.58■□□□□ 0.89
HLA-C-207ENST00000484378 LYZP61626 148 aa20.58■□□□□ 0.89
HLA-C-207ENST00000484378 NUTF2P61970 127 aaKnown RBP20.58■□□□□ 0.89
HLA-C-207ENST00000484378 DEDD2Q8WXF8 326 aa20.58■□□□□ 0.89
HLA-C-207ENST00000484378 SLC25A6P12236 298 aa20.57■□□□□ 0.88
HLA-C-207ENST00000484378 CSNK1G2-AS1Q8NCQ2 148 aa20.57■□□□□ 0.88
HLA-C-207ENST00000484378 C1QTNF4Q9BXJ3 329 aa20.57■□□□□ 0.88
HLA-C-207ENST00000484378 C11orf94C9JXX5 98 aa20.56■□□□□ 0.88
HLA-C-207ENST00000484378 MED6O75586 246 aa20.56■□□□□ 0.88
HLA-C-207ENST00000484378 PPP1R1AQ13522 171 aa20.56■□□□□ 0.88
HLA-C-207ENST00000484378 CENPSQ8N2Z9 138 aa20.56■□□□□ 0.88
HLA-C-207ENST00000484378 TMED3Q9Y3Q3 217 aa20.56■□□□□ 0.88
HLA-C-207ENST00000484378 H3BMM0 161 aa20.55■□□□□ 0.88
HLA-C-207ENST00000484378 SFT2D2O95562 160 aa20.55■□□□□ 0.88
HLA-C-207ENST00000484378 TCTAP57738 103 aa20.55■□□□□ 0.88
HLA-C-207ENST00000484378 OR2F1Q13607 317 aa20.55■□□□□ 0.88
HLA-C-207ENST00000484378 CCDC190Q86UF4 302 aa20.55■□□□□ 0.88
HLA-C-207ENST00000484378 PPP1R14BQ96C90 147 aa20.55■□□□□ 0.88
HLA-C-207ENST00000484378 XCL2Q9UBD3 114 aa20.55■□□□□ 0.88
HLA-C-207ENST00000484378 FRAS1Q86XX4 4008 aa20.55■□□□□ 0.88
HLA-C-207ENST00000484378 SNRPGP15A8MWD9 76 aa20.54■□□□□ 0.88
HLA-C-207ENST00000484378 IGLL5B9A064 214 aa20.54■□□□□ 0.88
HLA-C-207ENST00000484378 HLA-DRB4P13762 266 aa20.54■□□□□ 0.88
HLA-C-207ENST00000484378 HLA-DMBP28068 263 aa20.54■□□□□ 0.88
HLA-C-207ENST00000484378 NKX2-1P43699 371 aaPredicted RBP20.54■□□□□ 0.88
HLA-C-207ENST00000484378 CIB3Q96Q77 187 aaPredicted RBP20.54■□□□□ 0.88
HLA-C-207ENST00000484378 TRGV9Q99603 122 aa20.54■□□□□ 0.88
HLA-C-207ENST00000484378 MAGT1Q9H0U3 335 aa20.54■□□□□ 0.88
HLA-C-207ENST00000484378 HLA-DRB4X5D2U9 266 aa20.54■□□□□ 0.88
HLA-C-207ENST00000484378 ELOA3CA0A087WX78 387 aaPredicted RBP20.53■□□□□ 0.88
HLA-C-207ENST00000484378 HOXB5P09067 269 aa20.53■□□□□ 0.88
HLA-C-207ENST00000484378 C1orf194Q5T5A4 169 aa20.53■□□□□ 0.88
HLA-C-207ENST00000484378 RPP30P78346 268 aaKnown RBP20.52■□□□□ 0.88
HLA-C-207ENST00000484378 SPANXN2Q5MJ10 180 aa20.52■□□□□ 0.88
HLA-C-207ENST00000484378 Q6ZTC4 211 aa20.52■□□□□ 0.88
HLA-C-207ENST00000484378 LINC00052Q96N35 136 aa20.52■□□□□ 0.88
HLA-C-207ENST00000484378 WDR12Q9GZL7 423 aaKnown RBP20.52■□□□□ 0.88
HLA-C-207ENST00000484378 WRBO00258 174 aa20.51■□□□□ 0.87
HLA-C-207ENST00000484378 SYNGR2O43760 224 aa20.51■□□□□ 0.87
HLA-C-207ENST00000484378 ID1P41134 155 aa20.51■□□□□ 0.87
HLA-C-207ENST00000484378 THAP8Q8NA92 274 aa20.51■□□□□ 0.87
HLA-C-207ENST00000484378 COQ8AQ8NI60 647 aa20.51■□□□□ 0.87
HLA-C-207ENST00000484378 IGKV1OR2-108A0A075B7D4 117 aa20.5■□□□□ 0.87
HLA-C-207ENST00000484378 PSMB3P49720 205 aa20.5■□□□□ 0.87
HLA-C-207ENST00000484378 TRAV10A0A0B4J240 114 aa20.49■□□□□ 0.87
HLA-C-207ENST00000484378 IGKV3-20P01619 116 aa20.49■□□□□ 0.87
HLA-C-207ENST00000484378 INPP1P49441 399 aa20.49■□□□□ 0.87
HLA-C-207ENST00000484378 DEFB1P60022 68 aa20.49■□□□□ 0.87
HLA-C-207ENST00000484378 GDF5OSQ5U4N7 250 aa20.49■□□□□ 0.87
HLA-C-207ENST00000484378 GGNBP1Q5YKI7 109 aa20.49■□□□□ 0.87
HLA-C-207ENST00000484378 OR8I2Q8N0Y5 310 aa20.49■□□□□ 0.87
HLA-C-207ENST00000484378 RBM38Q9H0Z9 239 aaKnown RBP20.49■□□□□ 0.87
HLA-C-207ENST00000484378 UBE2MP61081 183 aaKnown RBP20.48■□□□□ 0.87
HLA-C-207ENST00000484378 SPANXN5Q5MJ07 72 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms