RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 SUPT4H1P63272 117 aaKnown RBP14.03□□□□□ -0.16
NDUFA3-213ENST00000484103 TMEM128Q5BJH2 165 aa14.03□□□□□ -0.16
NDUFA3-213ENST00000484103 PSMG4Q5JS54 123 aa14.03□□□□□ -0.16
NDUFA3-213ENST00000484103 RPP25LQ8N5L8 163 aaKnown RBP14.03□□□□□ -0.16
NDUFA3-213ENST00000484103 OR1S2Q8NGQ3 325 aa14.03□□□□□ -0.16
NDUFA3-213ENST00000484103 RNASEH2CQ8TDP1 164 aaKnown RBP14.03□□□□□ -0.16
NDUFA3-213ENST00000484103 KCNIP3Q9Y2W7 256 aa14.03□□□□□ -0.16
NDUFA3-213ENST00000484103 TMEM56-RWDD3S4R434 201 aa14.03□□□□□ -0.16
NDUFA3-213ENST00000484103 TRAV6A0A075B6T7 132 aa14.02□□□□□ -0.17
NDUFA3-213ENST00000484103 TRAV2A0A0B4J234 112 aa14.02□□□□□ -0.17
NDUFA3-213ENST00000484103 DEDDO75618 318 aa14.02□□□□□ -0.17
NDUFA3-213ENST00000484103 H2AFB2P0C5Z0 115 aa14.02□□□□□ -0.17
NDUFA3-213ENST00000484103 SLC25A4P12235 298 aa14.02□□□□□ -0.17
NDUFA3-213ENST00000484103 ANXA7P20073 488 aaKnown RBP14.02□□□□□ -0.17
NDUFA3-213ENST00000484103 C4BPBP20851 252 aa14.02□□□□□ -0.17
NDUFA3-213ENST00000484103 USF2Q15853 346 aaPredicted RBP14.02□□□□□ -0.17
NDUFA3-213ENST00000484103 RGS21Q2M5E4 152 aa14.02□□□□□ -0.17
NDUFA3-213ENST00000484103 AARDQ4LEZ3 155 aa14.02□□□□□ -0.17
NDUFA3-213ENST00000484103 GSG1LQ6UXU4 331 aa14.02□□□□□ -0.17
NDUFA3-213ENST00000484103 MARVELD1Q9BSK0 173 aa14.02□□□□□ -0.17
NDUFA3-213ENST00000484103 RBKSQ9H477 322 aa14.02□□□□□ -0.17
NDUFA3-213ENST00000484103 PPP1R1AQ13522 171 aa14.01□□□□□ -0.17
NDUFA3-213ENST00000484103 DTD1Q8TEA8 209 aa14.01□□□□□ -0.17
NDUFA3-213ENST00000484103 DCANP1Q8TF63 244 aa14.01□□□□□ -0.17
NDUFA3-213ENST00000484103 PBDC1Q9BVG4 233 aa14.01□□□□□ -0.17
NDUFA3-213ENST00000484103 PAIP2BQ9ULR5 123 aaKnown RBP14.01□□□□□ -0.17
NDUFA3-213ENST00000484103 SFT2D2O95562 160 aa14□□□□□ -0.17
NDUFA3-213ENST00000484103 IFNA4P05014 189 aa14□□□□□ -0.17
NDUFA3-213ENST00000484103 OR4E1P0C645 316 aa14□□□□□ -0.17
NDUFA3-213ENST00000484103 ATF4P18848 351 aaPredicted RBP14□□□□□ -0.17
NDUFA3-213ENST00000484103 EIF2B2P49770 351 aaKnown RBP14□□□□□ -0.17
NDUFA3-213ENST00000484103 SMCO1Q147U7 214 aa14□□□□□ -0.17
NDUFA3-213ENST00000484103 OXA1LQ15070 435 aa14□□□□□ -0.17
NDUFA3-213ENST00000484103 ETFRF1Q6IPR1 90 aa14□□□□□ -0.17
NDUFA3-213ENST00000484103 TRPT1Q86TN4 253 aaKnown RBP14□□□□□ -0.17
NDUFA3-213ENST00000484103 OR51G1Q8NGK1 321 aa14□□□□□ -0.17
NDUFA3-213ENST00000484103 OR1S1Q8NH92 325 aa14□□□□□ -0.17
NDUFA3-213ENST00000484103 HELTA6NFD8 242 aa13.99□□□□□ -0.17
NDUFA3-213ENST00000484103 RD3LP0DJH9 198 aa13.99□□□□□ -0.17
NDUFA3-213ENST00000484103 YPEL3P61236 119 aaPredicted RBP13.99□□□□□ -0.17
NDUFA3-213ENST00000484103 NMSQ5H8A3 153 aa13.99□□□□□ -0.17
NDUFA3-213ENST00000484103 C16orf54Q6UWD8 224 aa13.99□□□□□ -0.17
NDUFA3-213ENST00000484103 LGI3Q8N145 548 aa13.99□□□□□ -0.17
NDUFA3-213ENST00000484103 GLMPQ8WWB7 406 aa13.99□□□□□ -0.17
NDUFA3-213ENST00000484103 IL22RA2Q969J5 263 aa13.99□□□□□ -0.17
NDUFA3-213ENST00000484103 C11orf68Q9H3H3 251 aaKnown RBP13.99□□□□□ -0.17
NDUFA3-213ENST00000484103 AGRNO00468 2067 aa13.99□□□□□ -0.17
NDUFA3-213ENST00000484103 IGHV4-28A0A0C4DH34 117 aa13.98□□□□□ -0.17
NDUFA3-213ENST00000484103 C9orf170A2RU37 121 aa13.98□□□□□ -0.17
NDUFA3-213ENST00000484103 INMT-MINDY4F8WBC2 141 aa13.98□□□□□ -0.17
NDUFA3-213ENST00000484103 IL5P05113 134 aa13.98□□□□□ -0.17
NDUFA3-213ENST00000484103 GIG44P09565 113 aaPredicted RBP13.98□□□□□ -0.17
NDUFA3-213ENST00000484103 IAPPP10997 89 aa13.98□□□□□ -0.17
NDUFA3-213ENST00000484103 ANXA3P12429 323 aa13.98□□□□□ -0.17
NDUFA3-213ENST00000484103 MFFQ9GZY8 342 aa13.98□□□□□ -0.17
NDUFA3-213ENST00000484103 A0A0B4J2A0 478 aa13.97□□□□□ -0.17
NDUFA3-213ENST00000484103 ZFP92A6NM28 416 aa13.97□□□□□ -0.17
NDUFA3-213ENST00000484103 TOMM40O96008 361 aa13.97□□□□□ -0.17
NDUFA3-213ENST00000484103 PSG1P11464 419 aa13.97□□□□□ -0.17
NDUFA3-213ENST00000484103 VAMP1P23763 118 aa13.97□□□□□ -0.17
NDUFA3-213ENST00000484103 SIGLEC15Q6ZMC9 328 aa13.97□□□□□ -0.17
NDUFA3-213ENST00000484103 RAB40CQ96S21 281 aa13.97□□□□□ -0.17
NDUFA3-213ENST00000484103 HSPB7Q9UBY9 170 aa13.97□□□□□ -0.17
NDUFA3-213ENST00000484103 SHPKQ9UHJ6 478 aa13.97□□□□□ -0.17
NDUFA3-213ENST00000484103 U3KQE9 123 aa13.97□□□□□ -0.17
NDUFA3-213ENST00000484103 RBMY1A1P0DJD3 496 aaKnown RBP13.96□□□□□ -0.17
NDUFA3-213ENST00000484103 RBMY1CP0DJD4 496 aa13.96□□□□□ -0.17
NDUFA3-213ENST00000484103 DEFB1P60022 68 aa13.96□□□□□ -0.17
NDUFA3-213ENST00000484103 SRPXP78539 464 aa13.96□□□□□ -0.17
NDUFA3-213ENST00000484103 ZNF90Q03938 601 aa13.96□□□□□ -0.17
NDUFA3-213ENST00000484103 RBMY1FQ15415 496 aaKnown RBP13.96□□□□□ -0.17
NDUFA3-213ENST00000484103 C4orf46Q504U0 113 aa13.96□□□□□ -0.17
NDUFA3-213ENST00000484103 NOXA1Q86UR1 476 aa13.96□□□□□ -0.17
NDUFA3-213ENST00000484103 LRTM2Q8N967 370 aa13.96□□□□□ -0.17
NDUFA3-213ENST00000484103 Q8NAQ8 132 aa13.96□□□□□ -0.17
NDUFA3-213ENST00000484103 U3KQ87 197 aa13.96□□□□□ -0.17
NDUFA3-213ENST00000484103 IGLL5B9A064 214 aa13.95□□□□□ -0.18
NDUFA3-213ENST00000484103 FAM90A26D6RGX4 464 aa13.95□□□□□ -0.18
NDUFA3-213ENST00000484103 PRAF2O60831 178 aa13.95□□□□□ -0.18
NDUFA3-213ENST00000484103 IGKV3-20P01619 116 aa13.95□□□□□ -0.18
NDUFA3-213ENST00000484103 SPP1P10451 314 aa13.95□□□□□ -0.18
NDUFA3-213ENST00000484103 LYZP61626 148 aa13.95□□□□□ -0.18
NDUFA3-213ENST00000484103 OR2F1Q13607 317 aa13.95□□□□□ -0.18
NDUFA3-213ENST00000484103 MORN3Q6PF18 240 aaPredicted RBP13.95□□□□□ -0.18
NDUFA3-213ENST00000484103 ZNF767PQ75MW2 155 aa13.95□□□□□ -0.18
NDUFA3-213ENST00000484103 RNF125Q96EQ8 232 aa13.95□□□□□ -0.18
NDUFA3-213ENST00000484103 SEC22CQ9BRL7 303 aa13.95□□□□□ -0.18
NDUFA3-213ENST00000484103 AP2S1P53680 142 aaPredicted RBP13.94□□□□□ -0.18
NDUFA3-213ENST00000484103 FXYD7P58549 80 aa13.94□□□□□ -0.18
NDUFA3-213ENST00000484103 SNRPD3P62318 126 aaKnown RBP13.94□□□□□ -0.18
NDUFA3-213ENST00000484103 KMT2AQ03164 3969 aa13.94□□□□□ -0.18
NDUFA3-213ENST00000484103 ZNF431Q8TF32 576 aaPredicted RBP13.94□□□□□ -0.18
NDUFA3-213ENST00000484103 C2CD4CQ8TF44 421 aa13.94□□□□□ -0.18
NDUFA3-213ENST00000484103 MITD1Q8WV92 249 aa13.94□□□□□ -0.18
NDUFA3-213ENST00000484103 SLC35E1Q96K37 410 aa13.94□□□□□ -0.18
NDUFA3-213ENST00000484103 LINC00052Q96N35 136 aa13.94□□□□□ -0.18
NDUFA3-213ENST00000484103 NRN1Q9NPD7 142 aa13.94□□□□□ -0.18
NDUFA3-213ENST00000484103 XCL2Q9UBD3 114 aa13.94□□□□□ -0.18
NDUFA3-213ENST00000484103 DUXBA0A1W2PPF3 345 aa13.93□□□□□ -0.18
NDUFA3-213ENST00000484103 BUB3O43684 328 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms