RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 SLC25A33Q9BSK2 321 aa13.59□□□□□ -0.23
MRPL28-210ENST00000483764 SRD5A3Q9H8P0 318 aa13.59□□□□□ -0.23
MRPL28-210ENST00000483764 E7EUB6 86 aa13.59□□□□□ -0.23
MRPL28-210ENST00000483764 HMGB3O15347 200 aaKnown RBP13.59□□□□□ -0.23
MRPL28-210ENST00000483764 IGHV4-59P01825 116 aa13.59□□□□□ -0.23
MRPL28-210ENST00000483764 PFN1P07737 140 aaKnown RBP13.59□□□□□ -0.23
MRPL28-210ENST00000483764 CXCL1P09341 107 aa13.59□□□□□ -0.23
MRPL28-210ENST00000483764 HOXA5P20719 270 aa13.59□□□□□ -0.23
MRPL28-210ENST00000483764 SELENOTP62341 195 aa13.59□□□□□ -0.23
MRPL28-210ENST00000483764 CST9LP1Q5W188 147 aa13.59□□□□□ -0.23
MRPL28-210ENST00000483764 OR5R1Q8NH85 324 aa13.59□□□□□ -0.23
MRPL28-210ENST00000483764 GATAD1Q8WUU5 269 aa13.59□□□□□ -0.23
MRPL28-210ENST00000483764 TMEM190Q8WZ59 177 aa13.59□□□□□ -0.23
MRPL28-210ENST00000483764 FUT9Q9Y231 359 aa13.59□□□□□ -0.23
MRPL28-210ENST00000483764 MOB4Q9Y3A3 225 aa13.59□□□□□ -0.23
MRPL28-210ENST00000483764 TRAV9-1A0A075B6T8 112 aa13.58□□□□□ -0.24
MRPL28-210ENST00000483764 CNIH1O95406 144 aa13.58□□□□□ -0.24
MRPL28-210ENST00000483764 RPL27AP46776 148 aaKnown RBP13.58□□□□□ -0.24
MRPL28-210ENST00000483764 FAM3BP58499 235 aaPredicted RBP13.58□□□□□ -0.24
MRPL28-210ENST00000483764 SSBP2P81877 361 aaPredicted RBP13.58□□□□□ -0.24
MRPL28-210ENST00000483764 ZNF562Q6V9R5 426 aa13.58□□□□□ -0.24
MRPL28-210ENST00000483764 C16orf82Q7Z2V1 217 aa13.58□□□□□ -0.24
MRPL28-210ENST00000483764 TGIF2-C20orf24A0A0A6YYL0 155 aa13.57□□□□□ -0.24
MRPL28-210ENST00000483764 CGB1A6NKQ9 187 aa13.57□□□□□ -0.24
MRPL28-210ENST00000483764 C9JCJ5 164 aa13.57□□□□□ -0.24
MRPL28-210ENST00000483764 CORTO00230 105 aa13.57□□□□□ -0.24
MRPL28-210ENST00000483764 EIF3GO75821 320 aaKnown RBP eCLIP13.57□□□□□ -0.24
MRPL28-210ENST00000483764 TYMSP04818 313 aa13.57□□□□□ -0.24
MRPL28-210ENST00000483764 OR5G3P0C626 314 aa13.57□□□□□ -0.24
MRPL28-210ENST00000483764 LINC00869P0C866 280 aa13.57□□□□□ -0.24
MRPL28-210ENST00000483764 GALR1P47211 349 aa13.57□□□□□ -0.24
MRPL28-210ENST00000483764 CDX1P47902 265 aaPredicted RBP13.57□□□□□ -0.24
MRPL28-210ENST00000483764 ZNF343Q6P1L6 599 aa13.57□□□□□ -0.24
MRPL28-210ENST00000483764 C5orf56Q8N8D9 126 aa13.57□□□□□ -0.24
MRPL28-210ENST00000483764 ZNF114Q8NC26 417 aa13.57□□□□□ -0.24
MRPL28-210ENST00000483764 OR10W1Q8NGF6 305 aa13.57□□□□□ -0.24
MRPL28-210ENST00000483764 OR51G1Q8NGK1 321 aa13.57□□□□□ -0.24
MRPL28-210ENST00000483764 ABHD5Q8WTS1 349 aa13.57□□□□□ -0.24
MRPL28-210ENST00000483764 PFDN5Q99471 154 aa13.57□□□□□ -0.24
MRPL28-210ENST00000483764 SRSF8Q9BRL6 282 aaKnown RBP13.57□□□□□ -0.24
MRPL28-210ENST00000483764 URGCP-MRPS24S4R325 110 aa13.57□□□□□ -0.24
MRPL28-210ENST00000483764 GGCTO75223 188 aaKnown RBP13.56□□□□□ -0.24
MRPL28-210ENST00000483764 HLA-DRB1P01911 266 aa13.56□□□□□ -0.24
MRPL28-210ENST00000483764 CX3CL1P78423 397 aa13.56□□□□□ -0.24
MRPL28-210ENST00000483764 FXYD3Q14802 87 aa13.56□□□□□ -0.24
MRPL28-210ENST00000483764 SLC16A13Q7RTY0 426 aa13.56□□□□□ -0.24
MRPL28-210ENST00000483764 OR1L4Q8NGR5 311 aa13.56□□□□□ -0.24
MRPL28-210ENST00000483764 SSMEM1Q8WWF3 244 aa13.56□□□□□ -0.24
MRPL28-210ENST00000483764 SRSF12Q8WXF0 261 aaKnown RBP13.56□□□□□ -0.24
MRPL28-210ENST00000483764 TNCP24821 2201 aa13.56□□□□□ -0.24
MRPL28-210ENST00000483764 MXRA5Q9NR99 2828 aa13.56□□□□□ -0.24
MRPL28-210ENST00000483764 NAV3Q8IVL0 2385 aa13.55□□□□□ -0.24
MRPL28-210ENST00000483764 PPP5D1E7EU14 171 aa13.55□□□□□ -0.24
MRPL28-210ENST00000483764 GAMTQ14353 236 aa13.55□□□□□ -0.24
MRPL28-210ENST00000483764 PVRIGQ6DKI7 326 aa13.55□□□□□ -0.24
MRPL28-210ENST00000483764 LINC01551Q86U37 167 aa13.55□□□□□ -0.24
MRPL28-210ENST00000483764 SIGLECL1Q8N7X8 197 aa13.55□□□□□ -0.24
MRPL28-210ENST00000483764 M0QZK8 103 aa13.54□□□□□ -0.24
MRPL28-210ENST00000483764 HOXA3O43365 443 aaPredicted RBP13.54□□□□□ -0.24
MRPL28-210ENST00000483764 AMY1AP04745 511 aa13.54□□□□□ -0.24
MRPL28-210ENST00000483764 RPL19P84098 196 aaKnown RBP13.54□□□□□ -0.24
MRPL28-210ENST00000483764 FOXL1Q12952 345 aa13.54□□□□□ -0.24
MRPL28-210ENST00000483764 SCGB2A2Q13296 93 aa13.54□□□□□ -0.24
MRPL28-210ENST00000483764 GCSAMLQ5JQS6 135 aa13.54□□□□□ -0.24
MRPL28-210ENST00000483764 IGHV7-81A0A0B4J1V7 117 aa13.54□□□□□ -0.24
MRPL28-210ENST00000483764 TEX22C9J3V5 150 aa13.54□□□□□ -0.24
MRPL28-210ENST00000483764 S100A2P29034 98 aa13.54□□□□□ -0.24
MRPL28-210ENST00000483764 WT1-ASQ06250 92 aa13.54□□□□□ -0.24
MRPL28-210ENST00000483764 DNLZQ5SXM8 178 aa13.54□□□□□ -0.24
MRPL28-210ENST00000483764 FAM78BQ5VT40 261 aa13.54□□□□□ -0.24
MRPL28-210ENST00000483764 THAP8Q8NA92 274 aa13.54□□□□□ -0.24
MRPL28-210ENST00000483764 STXBP6Q8NFX7 210 aa13.54□□□□□ -0.24
MRPL28-210ENST00000483764 ARPC1AQ92747 370 aa13.54□□□□□ -0.24
MRPL28-210ENST00000483764 TNFRSF19Q9NS68 423 aa13.54□□□□□ -0.24
MRPL28-210ENST00000483764 CDC42EP3Q9UKI2 254 aa13.54□□□□□ -0.24
MRPL28-210ENST00000483764 VPREB3Q9UKI3 123 aa13.54□□□□□ -0.24
MRPL28-210ENST00000483764 SONP18583 2426 aaKnown RBP13.53□□□□□ -0.24
MRPL28-210ENST00000483764 A0A1W2PRE2 83 aa13.53□□□□□ -0.24
MRPL28-210ENST00000483764 IGLC7A0M8Q6 106 aa13.53□□□□□ -0.24
MRPL28-210ENST00000483764 NDUFB4O95168 129 aa13.53□□□□□ -0.24
MRPL28-210ENST00000483764 C8orf88P0DMB2 117 aa13.53□□□□□ -0.24
MRPL28-210ENST00000483764 OR10J1P30954 320 aa13.53□□□□□ -0.24
MRPL28-210ENST00000483764 ACY3Q96HD9 319 aa13.53□□□□□ -0.24
MRPL28-210ENST00000483764 HSPB9Q9BQS6 159 aa13.53□□□□□ -0.24
MRPL28-210ENST00000483764 SH2D7A6NKC9 451 aaPredicted RBP13.52□□□□□ -0.25
MRPL28-210ENST00000483764 HIST1H2BKO60814 126 aa13.52□□□□□ -0.25
MRPL28-210ENST00000483764 TRGC2P03986 189 aa13.52□□□□□ -0.25
MRPL28-210ENST00000483764 HIST1H2BJP06899 126 aa13.52□□□□□ -0.25
MRPL28-210ENST00000483764 HIST1H2BOP23527 126 aa13.52□□□□□ -0.25
MRPL28-210ENST00000483764 NPPCP23582 126 aa13.52□□□□□ -0.25
MRPL28-210ENST00000483764 HIST1H2BBP33778 126 aa13.52□□□□□ -0.25
MRPL28-210ENST00000483764 ATP5G3P48201 142 aa13.52□□□□□ -0.25
MRPL28-210ENST00000483764 HIST1H2BDP58876 126 aa13.52□□□□□ -0.25
MRPL28-210ENST00000483764 UBE2G2P60604 165 aa13.52□□□□□ -0.25
MRPL28-210ENST00000483764 HIST1H2BCP62807 126 aa13.52□□□□□ -0.25
MRPL28-210ENST00000483764 NDPQ00604 133 aa13.52□□□□□ -0.25
MRPL28-210ENST00000483764 HIST2H2BEQ16778 126 aa13.52□□□□□ -0.25
MRPL28-210ENST00000483764 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.52□□□□□ -0.25
MRPL28-210ENST00000483764 HIST1H2BHQ93079 126 aa13.52□□□□□ -0.25
MRPL28-210ENST00000483764 HIST1H2BNQ99877 126 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms