RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 UHRF2Q96PU4 802 aa7□□□□□ -1.29
CDC42SE1-204ENST00000483763 OR4F4Q96R69 305 aa7□□□□□ -1.29
CDC42SE1-204ENST00000483763 NIPSNAP3BQ9BS92 247 aa7□□□□□ -1.29
CDC42SE1-204ENST00000483763 WNT10AQ9GZT5 417 aa7□□□□□ -1.29
CDC42SE1-204ENST00000483763 DOK5Q9P104 306 aa7□□□□□ -1.29
CDC42SE1-204ENST00000483763 MXRA5Q9NR99 2828 aa6.99□□□□□ -1.29
CDC42SE1-204ENST00000483763 TRAV5A0A0B4J249 113 aa6.99□□□□□ -1.29
CDC42SE1-204ENST00000483763 C11orf94C9JXX5 98 aa6.99□□□□□ -1.29
CDC42SE1-204ENST00000483763 NPFFO15130 113 aa6.99□□□□□ -1.29
CDC42SE1-204ENST00000483763 IFNA1P01562 189 aa6.99□□□□□ -1.29
CDC42SE1-204ENST00000483763 RHOBP62745 196 aa6.99□□□□□ -1.29
CDC42SE1-204ENST00000483763 CLEC12BQ2HXU8 276 aa6.99□□□□□ -1.29
CDC42SE1-204ENST00000483763 TMEM116Q8NCL8 245 aa6.99□□□□□ -1.29
CDC42SE1-204ENST00000483763 RPUSD4Q96CM3 377 aaKnown RBP6.99□□□□□ -1.29
CDC42SE1-204ENST00000483763 DERL1Q9BUN8 251 aa6.99□□□□□ -1.29
CDC42SE1-204ENST00000483763 SMCO4Q9NRQ5 59 aa6.99□□□□□ -1.29
CDC42SE1-204ENST00000483763 KCNIP2Q9NS61 270 aa6.99□□□□□ -1.29
CDC42SE1-204ENST00000483763 TBL2Q9Y4P3 447 aaKnown RBP6.99□□□□□ -1.29
CDC42SE1-204ENST00000483763 YTHDF2Q9Y5A9 579 aaKnown RBP6.99□□□□□ -1.29
CDC42SE1-204ENST00000483763 TCRBV4S1A1TA0A5B7 111 aa6.98□□□□□ -1.29
CDC42SE1-204ENST00000483763 OOSP1A8MZH6 123 aa6.98□□□□□ -1.29
CDC42SE1-204ENST00000483763 I3L2K1 104 aa6.98□□□□□ -1.29
CDC42SE1-204ENST00000483763 CXorf1O96002 111 aa6.98□□□□□ -1.29
CDC42SE1-204ENST00000483763 GCHFRP30047 84 aa6.98□□□□□ -1.29
CDC42SE1-204ENST00000483763 CST9LP1Q5W188 147 aa6.98□□□□□ -1.29
CDC42SE1-204ENST00000483763 ZNF562Q6V9R5 426 aa6.98□□□□□ -1.29
CDC42SE1-204ENST00000483763 Q8N9W7 124 aa6.98□□□□□ -1.29
CDC42SE1-204ENST00000483763 THAP8Q8NA92 274 aa6.98□□□□□ -1.29
CDC42SE1-204ENST00000483763 MANBALQ9NQG1 85 aa6.98□□□□□ -1.29
CDC42SE1-204ENST00000483763 TLN2Q9Y4G6 2542 aa6.98□□□□□ -1.29
CDC42SE1-204ENST00000483763 SH2D7A6NKC9 451 aaPredicted RBP6.98□□□□□ -1.29
CDC42SE1-204ENST00000483763 K7EIM0 57 aa6.98□□□□□ -1.29
CDC42SE1-204ENST00000483763 AVPP01185 164 aa6.98□□□□□ -1.29
CDC42SE1-204ENST00000483763 OR5G3P0C626 314 aa6.98□□□□□ -1.29
CDC42SE1-204ENST00000483763 OR10J4P0C629 311 aa6.98□□□□□ -1.29
CDC42SE1-204ENST00000483763 IGHV4-38-2P0DP08 117 aa6.98□□□□□ -1.29
CDC42SE1-204ENST00000483763 EGR2P11161 476 aaPredicted RBP6.98□□□□□ -1.29
CDC42SE1-204ENST00000483763 RHEBQ15382 184 aa6.98□□□□□ -1.29
CDC42SE1-204ENST00000483763 MAPK1IP1LQ8NDC0 245 aa6.98□□□□□ -1.29
CDC42SE1-204ENST00000483763 HSPB9Q9BQS6 159 aa6.98□□□□□ -1.29
CDC42SE1-204ENST00000483763 PARLQ9H300 379 aa6.98□□□□□ -1.29
CDC42SE1-204ENST00000483763 TNFRSF19Q9NS68 423 aa6.98□□□□□ -1.29
CDC42SE1-204ENST00000483763 FUT9Q9Y231 359 aa6.98□□□□□ -1.29
CDC42SE1-204ENST00000483763 S4R3C0 116 aa6.98□□□□□ -1.29
CDC42SE1-204ENST00000483763 IGHV7-81A0A0B4J1V7 117 aa6.97□□□□□ -1.29
CDC42SE1-204ENST00000483763 TRAV40A0A0B4J280 105 aa6.97□□□□□ -1.29
CDC42SE1-204ENST00000483763 LINC01548A6NM66 108 aa6.97□□□□□ -1.29
CDC42SE1-204ENST00000483763 MT-ND4LP03901 98 aa6.97□□□□□ -1.29
CDC42SE1-204ENST00000483763 SNRPCP09234 159 aaKnown RBP6.97□□□□□ -1.29
CDC42SE1-204ENST00000483763 FAM106CPP0CH98 169 aa6.97□□□□□ -1.29
CDC42SE1-204ENST00000483763 FABP9Q0Z7S8 132 aa6.97□□□□□ -1.29
CDC42SE1-204ENST00000483763 OR5T1Q8NG75 326 aa6.97□□□□□ -1.29
CDC42SE1-204ENST00000483763 TVP23CQ96ET8 276 aa6.97□□□□□ -1.29
CDC42SE1-204ENST00000483763 FAM167A-AS1Q96KT0 104 aa6.97□□□□□ -1.29
CDC42SE1-204ENST00000483763 FANCD2OSQ96PS1 177 aa6.97□□□□□ -1.29
CDC42SE1-204ENST00000483763 SMIM7Q9BQ49 75 aa6.97□□□□□ -1.29
CDC42SE1-204ENST00000483763 SDF2L1Q9HCN8 221 aa6.97□□□□□ -1.29
CDC42SE1-204ENST00000483763 DNAJC4Q9NNZ3 241 aa6.97□□□□□ -1.29
CDC42SE1-204ENST00000483763 TMEM250H0YL14 139 aa6.97□□□□□ -1.29
CDC42SE1-204ENST00000483763 NDUFB4O95168 129 aa6.97□□□□□ -1.29
CDC42SE1-204ENST00000483763 DSCR9P59020 149 aa6.97□□□□□ -1.29
CDC42SE1-204ENST00000483763 REC114Q7Z4M0 266 aa6.97□□□□□ -1.29
CDC42SE1-204ENST00000483763 MRPL41Q8IXM3 137 aaKnown RBP6.97□□□□□ -1.29
CDC42SE1-204ENST00000483763 OR4X1Q8NH49 305 aa6.97□□□□□ -1.29
CDC42SE1-204ENST00000483763 PIFOQ8TCI5 191 aa6.97□□□□□ -1.29
CDC42SE1-204ENST00000483763 TUBA4BQ9H853 241 aa6.97□□□□□ -1.29
CDC42SE1-204ENST00000483763 A0A096LNT2 108 aa6.96□□□□□ -1.29
CDC42SE1-204ENST00000483763 XKRY2A2RUG3 117 aa6.96□□□□□ -1.29
CDC42SE1-204ENST00000483763 MSMBP08118 114 aa6.96□□□□□ -1.29
CDC42SE1-204ENST00000483763 IGLC1P0CG04 106 aa6.96□□□□□ -1.29
CDC42SE1-204ENST00000483763 PAX1P15863 534 aa6.96□□□□□ -1.29
CDC42SE1-204ENST00000483763 NUTF2P61970 127 aaKnown RBP6.96□□□□□ -1.29
CDC42SE1-204ENST00000483763 ZNF343Q6P1L6 599 aa6.96□□□□□ -1.29
CDC42SE1-204ENST00000483763 TMEM219Q86XT9 240 aa6.96□□□□□ -1.29
CDC42SE1-204ENST00000483763 FAM24BQ8N5W8 94 aa6.96□□□□□ -1.29
CDC42SE1-204ENST00000483763 ARPC1AQ92747 370 aa6.96□□□□□ -1.29
CDC42SE1-204ENST00000483763 YPEL4Q96NS1 127 aa6.96□□□□□ -1.29
CDC42SE1-204ENST00000483763 SLC25A2Q9BXI2 301 aa6.96□□□□□ -1.29
CDC42SE1-204ENST00000483763 AURKAIP1Q9NWT8 199 aaPredicted RBP6.96□□□□□ -1.29
CDC42SE1-204ENST00000483763 TRBV20OR9-2A0A075B6H5 130 aa6.96□□□□□ -1.3
CDC42SE1-204ENST00000483763 IGHV1-69DA0A0B4J2H0 117 aa6.96□□□□□ -1.3
CDC42SE1-204ENST00000483763 A0A0U1RQK1 487 aa6.96□□□□□ -1.3
CDC42SE1-204ENST00000483763 SCO2A0A1W2PP80 73 aa6.96□□□□□ -1.3
CDC42SE1-204ENST00000483763 CORTO00230 105 aa6.96□□□□□ -1.3
CDC42SE1-204ENST00000483763 OR7C2O60412 319 aa6.96□□□□□ -1.3
CDC42SE1-204ENST00000483763 IGKV1-17P01599 117 aa6.96□□□□□ -1.3
CDC42SE1-204ENST00000483763 IGHV1-69P01742 117 aa6.96□□□□□ -1.3
CDC42SE1-204ENST00000483763 PYYP10082 97 aa6.96□□□□□ -1.3
CDC42SE1-204ENST00000483763 ORM2P19652 201 aa6.96□□□□□ -1.3
CDC42SE1-204ENST00000483763 DEFB113Q30KQ7 82 aa6.96□□□□□ -1.3
CDC42SE1-204ENST00000483763 C22orf15Q8WYQ4 148 aa6.96□□□□□ -1.3
CDC42SE1-204ENST00000483763 SRSF8Q9BRL6 282 aaKnown RBP6.96□□□□□ -1.3
CDC42SE1-204ENST00000483763 C7orf69Q9H7B7 122 aa6.96□□□□□ -1.3
CDC42SE1-204ENST00000483763 ZNF355PQ9NSJ1 428 aa6.96□□□□□ -1.3
CDC42SE1-204ENST00000483763 HIF1ANQ9NWT6 349 aa6.96□□□□□ -1.3
CDC42SE1-204ENST00000483763 AP4M1O00189 453 aa6.95□□□□□ -1.3
CDC42SE1-204ENST00000483763 LINC00614P0C842 121 aa6.95□□□□□ -1.3
CDC42SE1-204ENST00000483763 C8orf88P0DMB2 117 aa6.95□□□□□ -1.3
CDC42SE1-204ENST00000483763 PSG1P11464 419 aa6.95□□□□□ -1.3
CDC42SE1-204ENST00000483763 SLC25A16P16260 332 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms