RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 F8W735 103 aaPredicted RBP10.4□□□□□ -0.74
CPNE1-225ENST00000483495 TOMM40O96008 361 aa10.4□□□□□ -0.74
CPNE1-225ENST00000483495 GATA3P23771 443 aa10.4□□□□□ -0.74
CPNE1-225ENST00000483495 CRYBB3P26998 211 aa10.4□□□□□ -0.74
CPNE1-225ENST00000483495 RPL35P42766 123 aaKnown RBP10.4□□□□□ -0.74
CPNE1-225ENST00000483495 MFAP4P55083 255 aa10.4□□□□□ -0.74
CPNE1-225ENST00000483495 YPEL3P61236 119 aaPredicted RBP10.4□□□□□ -0.74
CPNE1-225ENST00000483495 SUMO1P63165 101 aaKnown RBP10.4□□□□□ -0.74
CPNE1-225ENST00000483495 ZFP82Q8N141 532 aa10.4□□□□□ -0.74
CPNE1-225ENST00000483495 C5orf56Q8N8D9 126 aa10.4□□□□□ -0.74
CPNE1-225ENST00000483495 FAM110DQ8TAY7 271 aaPredicted RBP10.4□□□□□ -0.74
CPNE1-225ENST00000483495 TMEM68Q96MH6 324 aa10.4□□□□□ -0.74
CPNE1-225ENST00000483495 PYGO2Q9BRQ0 406 aa10.4□□□□□ -0.74
CPNE1-225ENST00000483495 TRAV20A0A0B4J274 112 aa10.4□□□□□ -0.75
CPNE1-225ENST00000483495 GP9P14770 177 aa10.4□□□□□ -0.75
CPNE1-225ENST00000483495 HIST1H1BP16401 226 aaKnown RBP10.4□□□□□ -0.75
CPNE1-225ENST00000483495 FCGR2BP31994 310 aaPredicted RBP10.4□□□□□ -0.75
CPNE1-225ENST00000483495 MYCNOSP40205 109 aa10.4□□□□□ -0.75
CPNE1-225ENST00000483495 LYZP61626 148 aa10.4□□□□□ -0.75
CPNE1-225ENST00000483495 OCC1Q8TAD7 63 aa10.4□□□□□ -0.75
CPNE1-225ENST00000483495 TCEAL7Q9BRU2 100 aa10.4□□□□□ -0.75
CPNE1-225ENST00000483495 ELOVL1Q9BW60 279 aa10.4□□□□□ -0.75
CPNE1-225ENST00000483495 C7orf69Q9H7B7 122 aa10.4□□□□□ -0.75
CPNE1-225ENST00000483495 IGHV3OR16-10A0A075B7F0 116 aa10.39□□□□□ -0.75
CPNE1-225ENST00000483495 A0A0U1RQK1 487 aa10.39□□□□□ -0.75
CPNE1-225ENST00000483495 HELTA6NFD8 242 aa10.39□□□□□ -0.75
CPNE1-225ENST00000483495 PGPEP1LA6NFU8 196 aa10.39□□□□□ -0.75
CPNE1-225ENST00000483495 PPP1R2P9O14990 202 aa10.39□□□□□ -0.75
CPNE1-225ENST00000483495 NDUFB8O95169 186 aa10.39□□□□□ -0.75
CPNE1-225ENST00000483495 IGHV4-38-2P0DP08 117 aa10.39□□□□□ -0.75
CPNE1-225ENST00000483495 BRD3OSQ6XYD6 125 aa10.39□□□□□ -0.75
CPNE1-225ENST00000483495 OR5T1Q8NG75 326 aa10.39□□□□□ -0.75
CPNE1-225ENST00000483495 FAM210BQ96KR6 192 aa10.39□□□□□ -0.75
CPNE1-225ENST00000483495 SLC25A39Q9BZJ4 359 aaPredicted RBP10.39□□□□□ -0.75
CPNE1-225ENST00000483495 C21orf62Q9NYP8 219 aa10.39□□□□□ -0.75
CPNE1-225ENST00000483495 TMEM14CQ9P0S9 112 aa10.39□□□□□ -0.75
CPNE1-225ENST00000483495 MOB4Q9Y3A3 225 aa10.39□□□□□ -0.75
CPNE1-225ENST00000483495 WI2-2373I1.2A0A1W2PRP0 233 aa10.38□□□□□ -0.75
CPNE1-225ENST00000483495 ATP6V0E1O15342 81 aa10.38□□□□□ -0.75
CPNE1-225ENST00000483495 TGOLN2O43493 480 aa10.38□□□□□ -0.75
CPNE1-225ENST00000483495 GNG7O60262 68 aa10.38□□□□□ -0.75
CPNE1-225ENST00000483495 RPS10P46783 165 aaKnown RBP10.38□□□□□ -0.75
CPNE1-225ENST00000483495 GALR1P47211 349 aa10.38□□□□□ -0.75
CPNE1-225ENST00000483495 ZNF329Q86UD4 541 aa10.38□□□□□ -0.75
CPNE1-225ENST00000483495 ZNF491Q8N8L2 437 aa10.38□□□□□ -0.75
CPNE1-225ENST00000483495 SFRP2Q96HF1 295 aa10.38□□□□□ -0.75
CPNE1-225ENST00000483495 OR5B12Q96R08 314 aa10.38□□□□□ -0.75
CPNE1-225ENST00000483495 TXN2Q99757 166 aa10.38□□□□□ -0.75
CPNE1-225ENST00000483495 HIF1ANQ9NWT6 349 aa10.38□□□□□ -0.75
CPNE1-225ENST00000483495 AURKAIP1Q9NWT8 199 aaPredicted RBP10.38□□□□□ -0.75
CPNE1-225ENST00000483495 SPG11Q96JI7 2443 aa10.38□□□□□ -0.75
CPNE1-225ENST00000483495 SRP14P37108 136 aaKnown RBP10.38□□□□□ -0.75
CPNE1-225ENST00000483495 UNQ5815/PRO19632Q6UWF5 114 aa10.38□□□□□ -0.75
CPNE1-225ENST00000483495 VN1R17PQ8TDU5 208 aa10.38□□□□□ -0.75
CPNE1-225ENST00000483495 IMMP2LQ96T52 175 aa10.38□□□□□ -0.75
CPNE1-225ENST00000483495 TRBV9A0A0B4J1U6 114 aa10.37□□□□□ -0.75
CPNE1-225ENST00000483495 K7EN84 100 aa10.37□□□□□ -0.75
CPNE1-225ENST00000483495 OR2J3O76001 311 aa10.37□□□□□ -0.75
CPNE1-225ENST00000483495 AMY1AP04745 511 aa10.37□□□□□ -0.75
CPNE1-225ENST00000483495 NBEAP1P0C6P0 100 aa10.37□□□□□ -0.75
CPNE1-225ENST00000483495 S100PP25815 95 aa10.37□□□□□ -0.75
CPNE1-225ENST00000483495 CRIP2P52943 208 aaPredicted RBP10.37□□□□□ -0.75
CPNE1-225ENST00000483495 CENPWQ5EE01 88 aa10.37□□□□□ -0.75
CPNE1-225ENST00000483495 TEX38Q6PEX7 206 aa10.37□□□□□ -0.75
CPNE1-225ENST00000483495 LINC01356Q8N9X3 169 aa10.37□□□□□ -0.75
CPNE1-225ENST00000483495 RNF125Q96EQ8 232 aa10.37□□□□□ -0.75
CPNE1-225ENST00000483495 SHANK2-AS3Q9BTD1 123 aa10.37□□□□□ -0.75
CPNE1-225ENST00000483495 TMUB1Q9BVT8 246 aa10.37□□□□□ -0.75
CPNE1-225ENST00000483495 FBXL7Q9UJT9 491 aa10.37□□□□□ -0.75
CPNE1-225ENST00000483495 VPS13CQ709C8 3753 aa10.37□□□□□ -0.75
CPNE1-225ENST00000483495 MDFIC2A0A1B0GVS7 189 aa10.36□□□□□ -0.75
CPNE1-225ENST00000483495 C5orf52A6NGY3 159 aa10.36□□□□□ -0.75
CPNE1-225ENST00000483495 H3BRN7 92 aa10.36□□□□□ -0.75
CPNE1-225ENST00000483495 GGCTO75223 188 aaKnown RBP10.36□□□□□ -0.75
CPNE1-225ENST00000483495 GNG4P50150 75 aa10.36□□□□□ -0.75
CPNE1-225ENST00000483495 AKR1D1P51857 326 aa10.36□□□□□ -0.75
CPNE1-225ENST00000483495 TAS2R60P59551 318 aa10.36□□□□□ -0.75
CPNE1-225ENST00000483495 SNRPEP62304 92 aaKnown RBP10.36□□□□□ -0.75
CPNE1-225ENST00000483495 IGF2BP2-AS1Q96M15 143 aa10.36□□□□□ -0.75
CPNE1-225ENST00000483495 BEX4Q9NWD9 120 aaPredicted RBP10.36□□□□□ -0.75
CPNE1-225ENST00000483495 CDC42EP3Q9UKI2 254 aa10.36□□□□□ -0.75
CPNE1-225ENST00000483495 S4R3C0 116 aa10.36□□□□□ -0.75
CPNE1-225ENST00000483495 ABCA1O95477 2261 aa10.36□□□□□ -0.75
CPNE1-225ENST00000483495 UTP20O75691 2785 aaKnown RBP10.36□□□□□ -0.75
CPNE1-225ENST00000483495 FBN2P35556 2912 aa10.36□□□□□ -0.75
CPNE1-225ENST00000483495 LRRK2Q5S007 2527 aa10.36□□□□□ -0.75
CPNE1-225ENST00000483495 LINC01548A6NM66 108 aa10.36□□□□□ -0.75
CPNE1-225ENST00000483495 AVPP01185 164 aa10.36□□□□□ -0.75
CPNE1-225ENST00000483495 ECSCRQ19T08 205 aa10.36□□□□□ -0.75
CPNE1-225ENST00000483495 Q56UQ5 140 aa10.36□□□□□ -0.75
CPNE1-225ENST00000483495 C19orf54Q5BKX5 351 aa10.36□□□□□ -0.75
CPNE1-225ENST00000483495 LEMD1Q68G75 181 aa10.36□□□□□ -0.75
CPNE1-225ENST00000483495 ZNF600Q6ZNG1 722 aa10.36□□□□□ -0.75
CPNE1-225ENST00000483495 TMEM219Q86XT9 240 aa10.36□□□□□ -0.75
CPNE1-225ENST00000483495 LINC00518Q8N0U6 118 aa10.36□□□□□ -0.75
CPNE1-225ENST00000483495 NECAP1Q8NC96 275 aa10.36□□□□□ -0.75
CPNE1-225ENST00000483495 PEX7O00628 323 aa10.35□□□□□ -0.75
CPNE1-225ENST00000483495 UBE2CO00762 179 aa10.35□□□□□ -0.75
CPNE1-225ENST00000483495 SCGB2A1O75556 95 aa10.35□□□□□ -0.75
CPNE1-225ENST00000483495 IGLV2-8P01709 118 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms